3 <TITLE>llExtract</TITLE>
11 [-t[itle] Title (NULL ).as(String ) ] :Optional :Title[80]
12 [-s[tep] xStep (1.0 ).as(Real )
13 yStep (1.0 ).as(Real ) ] :Optional :Step[A]
14 [-M[ax] MaxX (1.0 ).as(Real )
15 MaxY (1.0 ).as(Real ) ] :Optional :Max[GridUnit]
16 [-i[nput] In (NULL ).as(inFile ) ] :Optional :InputDataFile[mrcImage]
17 [-1[output] Nea (NULL ).as(outFile ) ] :Optional :NearSide[llData]
18 [-2[output] Far (NULL ).as(outFile ) ] :Optional :FarSide [llData]
19 [-R[otationAngle] RotationAngle (0.0 ).as(Real ) ] :Optional :Ratation Angle [Degree]
20 [-O[mega] Omega (0.0 ).as(Real ) ] :Optional :Omega[Degree]
21 [-S[hear] Shear (0.0 ).as(Real ) ] :Optional :Shear[Degree]
22 [-I[every] ievery (0 ).as(Integer ) ] :Optional :ievery
23 [-axl axl (0.0 ).as(Real ) ] :Optional :axl
24 [-ayl ayl (0.0 ).as(Real ) ] :Optional :ayl
25 [-x[Shift] xShift (0.0 ).as(Real ) ] :Optional :[GridUnit]
26 [-l[lMax] llMax (0 ).as(Integer ) ] :Optional :
27 [-d[elRInv] delRInv (0.0 ).as(Real ) ] :Optional :[A]
28 [-f[lagOutputInfo] ] :Optional :
29 [-L[ayerLineInfo] n (0 ).as(Integer )
32 leftMin (0.0 ).as(Real )
33 leftMax (0.0 ).as(Real )
34 rightMin (0.0 ).as(Real )
35 rightMax (0.0 ).as(Real )
36 weight (1.0 ).as(Real ) ... ] :Variable :
37 [-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
38 ----- Control File -----
39 Title[String:NULL] #Title[80]
40 xStep[Real:1.0] yStep[Real:1.0] #Step[A]
41 MaxX[Real:1.0] MaY[Real:1.0] #Max[GridUnit]
42 In[inFile:NULL] #InputDataFile[mrcImage]
43 Nea[outFile:NULL] #NearSide[llData]
44 Far[outFile:NULL] #FarSide [llData]
45 RotationAngle[Real:0.0] #Ratation Angle [Degree]
46 Omega[Real:0.0] #Omega[Degree]
47 Shear[Real:0.0] #Shear[Degree]
48 ievery[Integer:0] #ievery
51 xShift[Real:0.0] #[GridUnit]
53 delRInv[Real:0.0] #[A]
54 flagOutputInfo[0or1] #
55 n[Integer:0] l[Integer:0] Y[Real:0.0] leftMin[Real:0.0] leftMax[Real:0.0] rightMin[Real:0.0] rightMax[Real:0.0] weight[Real:1.0] #