doc/SmallTools/mrcImageGaussSphere.html

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   3 <TITLE>mrcImageGaussSphere</TITLE>
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   5 <BODY>
   6 <H1>mrcImageGaussSphere</H1>
   7 <H2>Usage</H2>
   8 <PRE>
   9 Usage: mrcImageGaussSphere
  10 Options:
  11     [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Essential :OutputDataFile
  12     [-E[uler]A[ngle]     EA                  (YOYS      ).as(String              )
  13                          Rot1                (0.0       ).as(Real                )
  14                          Rot2                (0.0       ).as(Real                )
  15                          Rot3                (0.0       ).as(Real                ) ] :Optional  :Input: Gauss Sphere: Rotation
  16     [-centre             ShiftX              (0.0       ).as(Real                )
  17                          ShiftY              (0.0       ).as(Real                )
  18                          ShiftZ              (0.0       ).as(Real                ) ] :Optional  :Input: Gauss Sphere: Centre
  19     [-sigmax             sigmax              (10        ).as(Real                ) ] :Optional  :sigmax[A]
  20     [-sigmay             sigmay              (20        ).as(Real                ) ] :Optional  :sigmay[A]
  21     [-sigmaz             sigmaz              (30        ).as(Real                ) ] :Optional  :sigmaz[A]
  22     [-sigma_range        sigma_range         (3         ).as(Real                ) ] :Optional  :x times
  23     [-weight             weight              (10        ).as(Real                ) ] :Optional  :weight
  24     [-size               size                (5         ).as(Real                ) ] :Optional  :Pixel Size[A]
  25     [-W[idth]            Width               (0         ).as(Real                ) ] :Optional  :Width[A]
  26     [-H[ight]            Height              (0         ).as(Real                ) ] :Optional  :Height[A]
  27     [-S[ection]          Section             (0         ).as(Real                ) ] :Optional  :Section[A]
  28     [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
  29     [-m[ode]             mode                (2         ).as(Integer             ) ] :Optional  :Mode
  30 Gauss Sphere is cutted at sigma_range*sigma
  31 Gauss Sphere = weight * exp ( - ((x^2 / sigmax^2)+(y^2 / sigmay^2)+(z^2 / sigmaz^2))
  32 mrcImageFileSize is (sigma_range*sigmax*2) x (sigma_range*sigmay*2) x (sigma_range*sigmaz*2)
  33 -----------------------------------------------------------------------------------
  34 -EA: for rotation
  35 -----------------------------------------------------------------------------------
  36 mode 0 char
  37 mode 2 float
  38 </PRE>
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