doc/SmallTools/mrcImageSinogramCorrelation.html

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   2 <HEAD>
   3 <TITLE>mrcImageSinogramCorrelation</TITLE>
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   5 <BODY>
   6 <H1>mrcImageSinogramCorrelation</H1>
   7 <H2>Usage</H2>
   8 <PRE>
   9 Usage: mrcImageSinogramCorrelation
  10 Options:
  11     [-i[nput]            In                  (NULL      ).as(inFile              ) ] :Essential :Input: in[sinogram: mrc]
  12     [-r[ef]              Ref                 (NULL      ).as(inFile              ) ] :Essential :Input: ref[sinogram: mrc]
  13     [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Essential :OutputDataFile
  14     [-w[eigth]           w0th                (1.0       ).as(Real                )
  15                          w1st                (0.0       ).as(Real                )
  16                          w2nd                (0.0       ).as(Real                ) ] :Optional  :Weigth for Mode: 1
  17     [-T[hreshold]        threshold           (0.0       ).as(Real                ) ] :Optional  :threshold for Mode: 2
  18     [-M[odeforCorrelation]corMode             (0         ).as(Integer             ) ] :Optional  :Mode: for Correlation
  19     [-L[ength]M[ode]     LengthMode          (0         ).as(Integer             ) ] :Optional  :Length Mode: for LengthCorrelation
  20     [-L[ength]T[hreshold]M[ode]LengthThresholdMode (0         ).as(Integer             ) ] :Optional  :Length Threshold Mode: for LengthCorrelation
  21     [-L[ength]T[hreshold]R[atio]LengthThresholdRatio(1.0       ).as(Real                ) ] :Optional  :ratio of threshold for LenthMode: 1
  22     [-L[ength]C[orrelation]M[ode]LCMode              (0         ).as(Integer             ) ] :Optional  :Mode: for LengthCorrelationMode
  23     [-L[ength]C[orrelation]T[hreshold]LengthCorrelationThreshold(0.0       ).as(Real                ) ] :Optional  :threshold for LengthCorrelation
  24     [-w[eight]L[ength]   weightLength        (1.0       ).as(Real                ) ] :Optional  :Weight for LengthCorrelation
  25     [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
  26     [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
  27
  28 ----- LengthMode -----
  29 -LM = 0 : without Length Correlation
  30 -LM = 1 : addition to Length Correlation (-LT)
  31 ----- LengthCorrelationMode -----
  32 -LCM = 0 : weight (-wL , -LTM , -LTR)
  33 -LCM = 1 : threshold (-LTM , -LTR , -LCT)
  34 -LCM = 2 : power weight (-LTM , -LTR , -wL)
  35 ----- LengthThresholdMode -----
  36 -LTM = 0 : Multiply derivationMax and ratio(-LTR)
  37 -LTM = 1 : Average of all derivation
  38 ----- Mode -----
  39 -m = 0 :    simple Correlation
  40 -m = 1 :    weight Correlation (addition to derivation)
  41 -m = 2 : threshold Correlation (addition to derivation)
  42 -m = 3 : power weight Correlation (addition to derivation : -LM=1 -LCM=2)
  43 </PRE>
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