include/lmrcImageFourierNeighborCorrelation.h

   1 /*
   2 # lmrcImageFourierNeighborCorrelation.h : $Revision$
   3 # $Date$
   4 # Created by $Author$
   5 # Usage : lmrcImageFourierNeighborCorrelation.h
   6 # Attention
   7 #   $Loccker$
   8 #       $State$
   9 #
  10 */
  11 /* $Log$ */
  12 #ifndef LMRCIMAGE_FOURIER_NEIGHBOR_CORRELATION_H
  13 #define LMRCIMAGE_FOURIER_NEIGHBOR_CORRELATION_H
  14
  15 #include <stdio.h>
  16 #include "mrcImage.h"
  17
  18 /* constant begin */
  19
  20 typedef enum lmrcImageFourierNeighborCorrelationCentreMode {
  21         lmrcImageFourierNeighborCorrelationCentreModeCentre = 0,
  22         lmrcImageFourierNeighborCorrelationCentreModeBottomLeft = 1,
  23         lmrcImageFourierNeighborCorrelationCentreModeUseStartN = 2
  24 } lmrcImageFourierNeighborCorrelationCentreMode;
  25
  26 /* constant end */
  27
  28 /* struct begin */
  29
  30 typedef struct lmrcImageFourierNeighborCorrelationInfo {
  31         lmrcImageFourierNeighborCorrelationCentreMode flagCentre;
  32         mrcPixelDataHowToGet shiftMode;
  33         double delta;
  34
  35         int flagPredictedFSC;
  36         mrcImage objMask;  // 1: Object
  37         mrcImage backMask; // 1: Background
  38 } lmrcImageFourierNeighborCorrelationInfo;
  39
  40 typedef struct lmrcImageFourierNeighborCorrelationResult {
  41         int     nR;
  42         double* R;
  43         double* data;
  44         int* N;
  45         double  FNCF;
  46         double  FNCN;
  47         double* FNCFs;
  48         double* FNCNs;
  49         double* SNR;
  50         double* FSC;
  51
  52     int flagFSCfull;
  53         double* FSCfull;
  54
  55         int flagCref;
  56         double* Cref;
  57
  58         int flagNoiseWeighted;
  59         double  Brestore;
  60         double* NoiseWeighted;
  61
  62 } lmrcImageFourierNeighborCorrelationResult;
  63
  64 /* struct end */
  65
  66 #ifdef __cplusplus
  67 extern "C" {
  68 #endif
  69
  70 /* prototype begin */
  71 extern void
  72 lmrcImageFourierNeighborCorrelation(lmrcImageFourierNeighborCorrelationResult* res,
  73         mrcImage* in,
  74         lmrcImageFourierNeighborCorrelationInfo linfo, int mode);
  75
  76 extern void
  77 lmrcImageFourierNeighborCorrelationPrint(FILE* fpt,
  78         lmrcImageFourierNeighborCorrelationResult* res,
  79         lmrcImageFourierNeighborCorrelationInfo linfo, int mode);
  80
  81 extern void
  82 lmrcImageFourierNeighborCorrelationPrintCentreMode(FILE* fpt);
  83 /* prototype end */
  84
  85 #ifdef __cplusplus
  86 };
  87 #endif
  88
  89 #endif  /* LMRCIMAGE_FOURIER_NEIGHBOR_CORRELATION_H */