mrcImage2pdb
Usage
Usage: mrcImage2pdb
Options:
[-i[nput] In (NULL ).as(inFile ) ] :Essential :InputDataFile
[-o[utput] Out (NULL ).as(outFile ) ] :Essential :OutputDataFile
[-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
[-m[ode] mode (5 ).as(Integer ) ] :Optional :Mode
[-hi[gh] h (0 ).as(Real ) ] :Optional :Value of high threshold. Default is the MAX.
[-lo[w] l (0 ).as(Real ) ] :Optional :Value of low threshold. Default is the MIN.
[-L[attice] ] :Optional :Atoms are on lattice points
[-Skip Skip (1 ).as(Integer ) ] :Optional :Skip atoms.
[-R[andom] Random (0 ).as(Real ) ] :Optional :Random
[-d[elta] delta (0.1 ).as(Real ) ] :Optional :Delta to select atoms to avoid too much concentration. Requiers 0-0.5 value. For mode2-4.
----- Additional Usage -----
mode0: One atom for one boxel.
mode1: Eight atoms for one boxel.
mode2: On the surface of high threshold. Atoms few.
mode3: On the surface of high threshold. Atoms medium.
mode4: On the surface of high threshold. Atoms many
mode5 (Default) : On the surface of high threshold. Mesh mode.