mrcImageSymmetryFind
Usage
Usage: mrcImageSymmetryFind
Options:
[-i[nput] In (NULL ).as(inFile ) ] :Essential :InputDataFile
[-o[utput] Out (NULL ).as(outFile ) ] :Optional :Output: correlation
[-O[utput] Out2 (stdout ).as(outFile ) ] :Optional :Output: SymmetryInformation
[-A[verage] Avg (NULL ).as(outFile ) ] :Optional :Output: Average
[-centreMode centreMode (1 ).as(Integer ) ] :Optional :Input: 0 : Gravity of Centre; 1 : Search n-fold
[-t1[threshold1] threshold1 (1.8 ).as(Real ) ] :Optional :Threshold of CheckByAdd
[-t2[threshold2] threshold2 (0.9 ).as(Real ) ] :Optional :Threshold in deciding the symmetry number
[-m1[mode1] mode1 (3 ).as(Integer ) ] :Optional :Mode of Check
[-m2[mode2] mode2 (2 ).as(Integer ) ] :Optional :Mode of Substruction
[-dr[delta r] dr (1 ).as(Real ) ] :Optional :Delta r of outputfile.
[-dtheta[delta theta]dtheta (1 ).as(Real ) ] :Optional :Delta theta of outputfile.[DEGREE]
[-n[umber] n (10 ).as(Integer ) ] :Optional :Check to the number.
[-n[umber]Range nmin (2 ).as(Integer )
nmax (10 ).as(Integer ) ] :Optional :Check to the number.
[-In Image (NULL ).as(inFileList )
Back (NULL ).as(inFileList ) ] :Optional :InputDataFile: Image and Back
[-rangex minx (-3 ).as(Real )
maxx (3 ).as(Real )
delx (1 ).as(Real ) ] :Optional :Input:
[-rangey miny (-3 ).as(Real )
maxy (3 ).as(Real )
dely (1 ).as(Real ) ] :Optional :Input:
[-rangez minz (0 ).as(Real )
maxz (0 ).as(Real )
delz (1 ).as(Real ) ] :Optional :Input:
[-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
----- Additional Usage -----
>>>> check type mode
1 : Check by Add
2 : Check by Correlation
4 : Check by Fourier
8 : Check by TTest
16 : Check by SRP
>>>> centre type mode
0 : Centre is GC (gravity of centre)
1 : Centre is Rotational Symmetry
>>>> subtrcation type mode
0 : No Subtraction
1 : Mean Subtraction
2 : Min Subtraction