pdbTwoProteinFit

Usage

Usage: pdbTwoProteinFit
Options:
    [-i[nput]            In                  (NULL      ).as(inFile              ) ] :Essential :InputDataFile
    [-i[nput]res[idue]   InResidue           (NULL      ).as(inFile              ) ] :Optional  :ResidueInformationOfInputData
    [-i[nput]sel[ectResidue]SelectIn            (NULL      ).as(outFile             ) ] :Optional  :Output: Selected residue of in after fitting
    [-r[ef]              Ref                 (NULL      ).as(inFile              ) ] :Essential :ReferenceDataFile
    [-r[ef]res[idue]     RefResidue          (NULL      ).as(inFile              ) ] :Optional  :ResidueInfomationOfReferenceData
    [-r[ef]sel[ectResidue]SelectRef           (NULL      ).as(outFile             ) ] :Optional  :Output: Selected residue of after fitting
    [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Essential :OutputDataFile
    [-o[utput]Matrix     Matrix              (stdout    ).as(outFile             ) ] :Optional  :OutputMatrix
    [-o[utput]Param      Param               (stdout    ).as(outFile             ) ] :Optional  :OutputParam
    [-o[utput]Dis[tance] outDis              (stdout    ).as(outFile             ) ] :Optional  :Output: PDB Distance as Temp
    [-o[utput]Dis[tance]2outDis2             (stdout    ).as(outFile             ) ] :Optional  :Output: Distance List for Ca
    [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
    [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
>>>> Input and Reference File Format<<<<
ResidueNumberToBeFitted
...
If |, all residules are sellected till the residue in the next line