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[eos/optional.git] / doc / SmallTools / ctfDeterminationFromMultiImage.html

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 <PRE>
 Usage: ctfDeterminationFromMultiImage
 Options:
-    [-i[nput]            In                  (NULL      )] :Essential :Input: mrcImageList
-    [-o[utput]           Out                 (stdout    )] :Optional  :Output: Result obtained by fitting procedure
-    [-O[utput]           Out2                (.estimate )] :Optional  :Output: Estimated scattering: add this value to input filename
-    [-Molec[ular]Env[elope]MolecEnv            (50        )] :Optional  :Input [A]: Spread : Assign molecular envelope as Gaussian
-    [-Molec[ular]Env[elope]2MolecEnvFile        (NULL      )] :Optional  :Input filename: Scattering Factor suggested by Table
-    [-c[onfig]           configFile          (NULL      )] :Optional  :ConfigurationFile
-    [-m[ode]             mode                (0         )] :Optional  :Mode
+    [-i[nput]            In                  (NULL      ).as(inFileList          ) ] :Optional  :Input: mrcImageList
+    [-i[nput]            In2                 (NULL      ).as(inFileList          ) ] :Optional  :Input: AngularDistributionList
+    [-o[utput]           Out                 (stdout    ).as(outFile             ) ] :Optional  :Output: Result obtained by fitting procedure
+    [-O[utput]           Out2                (.estimate ).as(String              ) ] :Optional  :Output: Estimated scattering: add this value to input filename
+    [-Molec[ular]Env[elope]MolecEnv            (50        ).as(Real                ) ] :Optional  :Input [A]: Spread : Assign molecular envelope as Gaussian
+    [-Molec[ular]Env[elope]2MolecEnvFile        (NULL      ).as(String              ) ] :Optional  :Input filename: Scattering Factor suggested by Table
+    [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
+    [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
 ----- Additional Usage -----
 ----- InFile format: -i or -i2 
 filename defocus[A] AmpOverPhase kV Cs Cc Ai I SN MTFMode MTF MTF2 MolecEnv Magnification