mrcImageOpticalFlow & mrcImageLucasKanade & mrcImageHornSchunckの変更

[eos/base.git] / src / Tools / mrcImage / .Source

diff --git a/src/Tools/mrcImage/.Source b/src/Tools/mrcImage/.Source
index ad61383..a058c53 100644 (file)
--- a/src/Tools/mrcImage/.Source
+++ b/src/Tools/mrcImage/.Source
@@ -7,33 +7,37 @@ mrc3DExtractZ \
 mrcFETnormalizeBySD \
 mrcFFTBandPassFilter \
 mrcFFTCTFCompensation \
+mrcFFTCentralSection \
+mrcFFTCentralSectionCompare \
 mrcFFTDigitize \
 mrcFFTExpression \
 mrcFFTFibreDiagram \
 mrcFFTFiltering \
-mrcFFTInfo \
 mrcFFTIQEstimation \
+mrcFFTInfo \
 mrcFFTLayerLineCheck \
 mrcFFTMedianFilter \
-mrcFFTplainreduce \
 mrcFFTProjection \
 mrcFFTResampling \
 mrcFFTShellInfo \
 mrcFFTSizeChange \
 mrcFFTSpectrum \
 mrcFFTXFiltering \
+mrcFFTplainreduce \
 mrcFTMeridianEquatorRedece \
+mrcImage1DProjectionfrom2D \
 mrcImage1dAverageByCorrelation \
 mrcImage1dCutAverage \
-mrcImage1DProjectionfrom2D \
 mrcImage1dShiftAverageByAnnealing \
 mrcImage1dShiftByCorrelation \
 mrcImage2DBackProjection \
 mrcImage2DProjection \
 mrcImage2pdb \
+mrcImage3DCTFObservation \
 mrcImage3DHighResoEmphasis \
 mrcImage3DPad \
 mrcImage3DPad2 \
+mrcImage3DPeakGet \
 mrcImage3DSymmetryFind \
 mrcImage3DWindowing \
 mrcImageAbnormalValueRemove \
@@ -42,23 +46,36 @@ mrcImageAdaptiveBinalization \
 mrcImageAdd \
 mrcImageAddValue \
 mrcImageAreaCalc \
+mrcImageAsProbability \
 mrcImageAssignedToTFofPDB \
 mrcImageAutoCorrelationWithWindowing \
 mrcImageAutoFilamentExtract \
 mrcImageAutoFilamentExtractResultAnalysis \
+mrcImageAutoRotationAverage \
 mrcImageAutoRotationCorrelation \
 mrcImageAutoRotationCorrelation3D \
 mrcImageAutoRotationCorrelationResultPrint \
+mrcImageAutoTriming \
 mrcImageAverage \
+mrcImageBackgroundSubtraction \
 mrcImageBandPassFilter \
 mrcImageBilateralFilter \
 mrcImageBinalization \
 mrcImageBlockMerge \
+mrcImageBlurByTemperatureFactor \
+mrcImageBottomHatTransform \
 mrcImageBoundaryInfo \
 mrcImageCCDNoiseRemove \
+mrcImageCTFCompensation \
+mrcImageCTFCompensationForTiltImage \
+mrcImageCTFDetermination \
+mrcImageCTFObservation \
+mrcImageCTFSN \
+mrcImageCVE \
 mrcImageCenterDensityChange \
 mrcImageCenterGet \
 mrcImageCenterOfMassCalculate \
+mrcImageChainCodeCalc \
 mrcImageCircumferentialProjection \
 mrcImageClosing \
 mrcImageClusterAnalysis \
@@ -74,45 +91,53 @@ mrcImageCorrelationInFourierSpace \
 mrcImageCorrelationServer \
 mrcImageCorrelationWithCTFCompensation \
 mrcImageCrystalCreate \
-mrcImageCTFCompensation \
-mrcImageCTFCompensationForTiltImage \
-mrcImageCTFDetermination \
-mrcImageCTFObservation \
-mrcImageCTFSN \
+mrcImageCrystalDeform \
+mrcImageCurl \
 mrcImageCutAndSetInArray \
-mrcImageCVE \
 mrcImageCylinderSection \
 mrcImageDeadPixelCorrection \
+mrcImageDeconvolution \
 mrcImageDensityChangeEstimation \
 mrcImageDensityInfo \
 mrcImageDensityNormalization \
 mrcImageDensityNormalizationByImage \
+mrcImageDensityWeightedAreaCalc \
 mrcImageDilation \
 mrcImageDisplayDensityAsTempFactor \
 mrcImageDistanceConversion \
+mrcImageDivergence \
 mrcImageDivideInfoForTomography \
 mrcImageDivideIntoTwoImages \
+mrcImageDividedByFile \
+mrcImageEdgeCalc \
+mrcImageEdgeEnhancement \
 mrcImageEdgeImageGet \
 mrcImageEnhancementWithFuzzySets \
 mrcImageErosion \
 mrcImageEstimateTiltImage \
 mrcImageExpression \
-mrcImageFeatureExtraction \
 mrcImageFFT \
 mrcImageFFTLayerLineExtraction \
+mrcImageFFTSetsExtract \
+mrcImageFOMCalc \
+mrcImageFeatureCalc \
+mrcImageFeatureExtraction \
 mrcImageFilamentSearch \
 mrcImageFilamentSearchResultShow \
 mrcImageFilterCreate \
 mrcImageFilteringbyFile \
 mrcImageFilteringbyFileForVariance \
-mrcImageFOMCalc \
-mrcImageFOMCalc.org \
+mrcImageFlatFieldCorrection \
+mrcImageFloating \
+mrcImageFourierNeighborCorrelation \
 mrcImageFourierPowerSpectrum \
 mrcImageFourierShellCorrelation \
+mrcImageFourierSpaceFilter \
 mrcImageFractalFourierShellCorrelation \
 mrcImageFractalFrourierShellCorrelation \
 mrcImageGaussDisc \
 mrcImageGaussSphere \
+mrcImageGradient \
 mrcImageHeaderChange \
 mrcImageHelicalAveraging \
 mrcImageHelicalConvolution \
@@ -120,11 +145,18 @@ mrcImageHelicalMappingFrom2DImage \
 mrcImageHelicalMasking \
 mrcImageHelicalMaskingBy2DImage \
 mrcImageHelicalProjection \
-mrcImageHighlighting \
 mrcImageHighPassFilter \
+mrcImageHighlighting \
+mrcImageHoleFilling \
+mrcImageHornSchunck \
+mrcImageHoughTransform \
+mrcImageHoughTransformInverse \
 mrcImageInfo \
 mrcImageLabeling \
+mrcImageLocalMaximumValuesFind \
+mrcImageLogicalOperation \
 mrcImageLowPassFilter \
+mrcImageLucasKanade \
 mrcImageMagnificationChange \
 mrcImageMake2DArrayImage \
 mrcImageMakeCylinder \
@@ -134,6 +166,8 @@ mrcImageMakeSphere \
 mrcImageMappingtoPdb \
 mrcImageMasking \
 mrcImageMaskingByImage \
+mrcImageMeanFreePathCalc \
+mrcImageMergeFFT \
 mrcImageMergebyside \
 mrcImageMirroring \
 mrcImageModeChange \
@@ -141,12 +175,13 @@ mrcImageModelCreate \
 mrcImageModelSubfilamentsCreate \
 mrcImageMontageCreate \
 mrcImageMove \
+mrcImageMovingModelCreate \
 mrcImageMultiCTFCompensation \
 mrcImageMultiCTFDetermination \
 mrcImageMultiplying \
 mrcImageMultiplyingbyFile \
-mrcImageNfoldAxisSearch \
 mrcImageNLMeansFilter \
+mrcImageNfoldAxisSearch \
 mrcImageNoiseAdd \
 mrcImageNoiseCreate \
 mrcImageNoiseReductionByRelaxation \
@@ -156,12 +191,14 @@ mrcImageNullImageCreate \
 mrcImageOddBoxel \
 mrcImageOneLineSimilarityCalc \
 mrcImageOpening \
+mrcImageOpticalFlow \
+mrcImagePCA \
 mrcImagePad \
 mrcImagePanoramaCreate \
 mrcImageParticleCandidateExtract \
-mrcImagePCA \
-mrcImagepdbFileReduce \
+mrcImagePattersonFunctionCalc \
 mrcImagePeakSearch \
+mrcImagePerimeterCalc \
 mrcImagePhaseCTFCompensationFromCTFINFO \
 mrcImagePixelDataGet \
 mrcImagePolyROI \
@@ -170,6 +207,10 @@ mrcImagePrint \
 mrcImagePrint3D \
 mrcImageProjection \
 mrcImagePut3D \
+mrcImageROI \
+mrcImageROI3D \
+mrcImageROIs \
+mrcImageROItoPCAoutputImage \
 mrcImageRadialDistribution \
 mrcImageRandomParticlesImageCreate \
 mrcImageRealValueAdd \
@@ -181,19 +222,20 @@ mrcImageRefFFTConv2D \
 mrcImageRefScaleChangeWithPad \
 mrcImageResolutionEstimateForFilaments \
 mrcImageReverse \
-mrcImageROI \
-mrcImageROI3D \
-mrcImageROIs \
-mrcImageROItoPCAoutputImage \
 mrcImageRotation \
 mrcImageRotation3D \
+mrcImageSN \
+mrcImageSNEstimate \
 mrcImageSamplingUnitChange \
 mrcImageScalarAdd \
 mrcImageSectionGet \
+mrcImageSeriesNormalizing \
 mrcImageSetFunction \
 mrcImageShapeOrientation \
 mrcImageShapePCA \
 mrcImageShapePCAFit \
+mrcImageShapeRelaxation \
+mrcImageShapeSearch \
 mrcImageShift \
 mrcImageShiftFollowingGC \
 mrcImageShrink \
@@ -204,18 +246,21 @@ mrcImageSinogramCorrelation \
 mrcImageSinogramCreate \
 mrcImageSinogramFFT \
 mrcImageSmoothing \
-mrcImageSN \
+mrcImageSoftEdge \
 mrcImageSolventFlattening \
+mrcImageSpatialFrequencyFilter \
 mrcImageSphere \
 mrcImageSphereCheck \
 mrcImageSplit \
 mrcImageSquare \
-mrcImagesSinogramCorrelation \
 mrcImageStack \
 mrcImageStandardDeviation \
-mrcImagestoRef \
+mrcImageStreamLine \
 mrcImageSubtraction \
 mrcImageSuperResolution \
+mrcImageSuperResolutionByOpticalFlow \
+mrcImageSurfaceAreaCalc \
+mrcImageSurfaceCalc \
 mrcImageSymmetryAverage \
 mrcImageSymmetryCentreFind \
 mrcImageSymmetryFind \
@@ -224,27 +269,35 @@ mrcImageTiltAxisSearch \
 mrcImageTiltAxisSearchHelp \
 mrcImageToNAMDConstantForces \
 mrcImageToPointsSet \
+mrcImageToneReversal \
+mrcImageTopHatTransform \
 mrcImageTrans \
 mrcImageTransformDescartesIntoPolar \
 mrcImageTransformSign \
 mrcImageTranspose \
 mrcImageUnbentROI \
 mrcImageUnexpectedMassFromPDB \
+mrcImageUnsharpening \
 mrcImageUntwist \
 mrcImageVarianceAnalysis \
 mrcImageVarianceMap \
 mrcImageVolumeCalc \
 mrcImageWindowing \
 mrcImageZPad \
+mrcImagepdbFileReduce \
+mrcImagesSinogramCorrelation \
+mrcImagestoRef \
 mrcImateToPointsSet \
 mrcInfo \
 mrcInfoSet \
 mrcMask \
 mrcMeanYlinePos \
 mrcMirrorImageCreate \
-mrcRefCoreGet \
+mrcMultiFFTCentralSectionsCompare \
+mrcMultiFFTCentralSectionsSigmaCalc \
 mrcRefCorEstimate \
 mrcRefCorModify \
+mrcRefCoreGet \
 mrcRefCorrelation \
 mrcRefCorrelationConv \
 mrcRefEstimate \
@@ -256,9 +309,9 @@ mrcRefImageOmegaCorrelation \
 mrcRefImagepwzCorEstimate \
 mrcRefImagepwzCorModify \
 mrcRefImagepwzCorPeakFind \
+mrcRefImagepwzCorSmoothing \
 mrcRefImagepwzCorrelation \
 mrcRefImagepwzCorrelationByFFT \
-mrcRefImagepwzCorSmoothing \
 mrcRefImagexaFit \
 mrcRefLowPassFilter \
 mrcRefNoiseAdd \