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-<TITLE>mrcImagePrint</TITLE>
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-<H1>mrcImagePrint</H1>
-<H2>Usage</H2>
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-Usage: mrcImagePrint
-Options:
- [-i[nput] In (NULL ).as(inFile ) ] :Essential :InputImageFile
- [-o[utput] Out (stdout ).as(outFile ) ] :Optional :OutputImageFile
- [-H[ighThreshold] thresHigh (0.0 ).as(Real ) ] :Optional :High Threshold
- [-L[owThreshold] thresLow (1.0 ).as(Real ) ] :Optional :Low Threshold
- [-Section section (z ).as(Character ) ] :Optional :[z|x|y]Section: Def: z-section
- [-x[Section] xMin (0 ).as(Integer )
- xMax (0 ).as(Integer ) ] :Optional :x section
- [-y[Section] yMin (0 ).as(Integer )
- yMax (0 ).as(Integer ) ] :Optional :y section
- [-z[Section] zMin (0 ).as(Integer )
- zMax (0 ).as(Integer ) ] :Optional :z section
- [-S[cale] Scale (1.0 ).as(Real ) ] :Optional :Scale(Centre is Bottom Left): -S 1 := 1 mm/pixel
- [-A[bsolute]S[cale] AbScale (1.0 ).as(Real ) ] :Optional :Scale(Centre is Bottom Left): -AS 1 := 1 mm/A (Real) or 1 mm/A-1 (Fourier Space)
- [-E[nlarge] Enlarge (1.0 ).as(Real ) ] :Optional :Enlargement(image center is center)
- [-center cx (0.0/* in case of FT or N.x/2.0 in case of Image*/).as(Real )
- cy (0.0/* in case of FT or N.y/2.0 in case of Image */).as(Real ) ] :Optional :Center of a printed image
- [-C[ontour] contourLevel (1.0 ).as(Real ) ... ] :Variable :ContourLevel
- [-I[nverse] ] :Optional :Black is High Density.
- [-A[uto] ] :Optional :HighThres=Mean-SD, LowThres=Mean+SD
- [-AC[ontour] AutoContour (10 ).as(Integer ) ] :Optional :Auto Contour(thresHigh <-> mean)
- [-PC[ontour] PeakContour (10 ).as(Integer ) ] :Optional :Peak Contour(thresHigh <-> (mean+thresHigh)/2
- [-AC[ontour]2 AutoContour2 (10 ).as(Integer ) ] :Optional :Auto Contour2(thresHigh <-> thresLow)
- [-Y[expand] Yexpand (1 ).as(Real ) ] :Optional :Y-axis expanding
- [-RGB Red (0 ).as(Real )
- Green (0 ).as(Real )
- Blue (0 ).as(Real ) ] :Optional :Contour Color Mode: RGB
- [-RGBGradient RedFirst (0 ).as(Real )
- GreenFirst (0 ).as(Real )
- BlueFirst (0 ).as(Real )
- RedLast (0 ).as(Real )
- GreenLast (0 ).as(Real )
- BlueLast (0 ).as(Real ) ] :Optional :Contour Color GradientMode: RGB
- [-HSB Hue (0 ).as(Real )
- Saturation (0 ).as(Real )
- Brightness (0 ).as(Real ) ] :Optional :Contour Color Mode: HSB
- [-HSBGradient HueFirst (0 ).as(Real )
- SaturationFirst (0 ).as(Real )
- BrightnessFirst (0 ).as(Real )
- HueLast (0 ).as(Real )
- SaturationLast (0 ).as(Real )
- BrightnessLast (0 ).as(Real ) ] :Optional :Contour Color GradientMode: HSB
- [-LineColourRGB LineRed (0 ).as(Real )
- LineGreen (0 ).as(Real )
- LineBlue (0 ).as(Real ) ] :Optional :Contour Color Mode: RGB
- [-LineColourRGBGradientLineRedFirst (0 ).as(Real )
- LineGreenFirst (0 ).as(Real )
- LineBlueFirst (0 ).as(Real )
- LineRedLast (0 ).as(Real )
- LineGreenLast (0 ).as(Real )
- LineBlueLast (0 ).as(Real ) ] :Optional :Contour Color GradientMode: RGB
- [-LineColourHSB LineHue (0 ).as(Real )
- LineSaturation (0 ).as(Real )
- LineBrightness (0 ).as(Real ) ] :Optional :Contour Color Mode: HSB
- [-LineColourHSBGradientLineHueFirst (0 ).as(Real )
- LineSaturationFirst (0 ).as(Real )
- LineBrightnessFirst (0 ).as(Real )
- LineHueLast (0 ).as(Real )
- LineSaturationLast (0 ).as(Real )
- LineBrightnessLast (0 ).as(Real ) ] :Optional :Contour Color GradientMode: HSB
- [-LineChange LineColorChange (0.1 ).as(Real ) ] :Optional :Contour Color Change
- [-LineWidthStart LineWidthStart (0.1 ).as(Real ) ] :Optional :Contour Line Width Step
- [-LineWidthStep LineWidthStep (0.05 ).as(Real ) ] :Optional :Contour Line Width Step
- [-ReverseOrder ] :Optional :Reverse Print Order
- [-Untwist untwist (0.0 ).as(Real ) ] :Optional :Untwist Angle [degree/A], example: (-13,28) = 0.4709576
- [-UpsideDown ] :Optional :Upside Down
- [-Centre ] :Optional :Image Centre is at the centre of paper.
- [-CircleRadius CircleRadius (0.5 ).as(Real ) ] :Optional :Radius of circles in the case of imageCircles
- [-m[ode] mode (49 ).as(Integer ) ] :Optional :Mode
------ mode -----
- 1: ImageDensity
- 2: Contour(DiffrentLineWidth)
- 4: Contour(SameLineWidth)
- 8: BlackCircles
- 16: Scale
- 32: Centre Mark
- 16777216: Amplitude by AsciiFile
- 33554432: Log of Amplitude by AsciiFile
- 67108864: Phase by AsciiFile
------ Attention !! -----
- -C option is stronger than -AC and -PC
- -PC option is stronger than -AC
- -AC: (i+1)*(max-maen) /(AC+1) + mean
- -PC: (i )*(max+mean)/2)/AC + (max+mean)/2
------ Attention 2!! -----
- -AS option is stronger than -S option
- The default value of -AS option is ignored.
- The default value of -S option is used.
- Both options are applied to y-axis.
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+/bin/bash: mrcImagePrint: No such file or directory
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