-/bin/bash: pdbHelix: No such file or directory
+<HTML>
+<HEAD>
+<TITLE>pdbHelix</TITLE>
+</HEAD>
+<BODY>
+<H1>pdbHelix</H1>
+<H2>Usage</H2>
+<PRE>
+Usage: pdbHelix
+Options:
+ [-i[nput] In (NULL ).as(inFile ) ] :Essential :InputDataFile
+ [-o[utput] Out (NULL ).as(outFile ) ] :Optional :OutputDataFile
+ [-3[D] Out3D (NULL ).as(outFile ) ] :Optional :OutputDataFile(3D-mrc)
+ [-2[D] Out2D (NULL ).as(outFile ) ] :Optional :OutputDataFile(2D-mrc projection(y-z))
+ [-d[elta] delta (5 ).as(Real ) ] :Optional :delta[A](mrc-file)
+ [-p[delphi] delphi (165 ).as(Real ) ] :Essential :deltaPhi
+ [-dp[delphi] deldelphi (5 ).as(Real ) ] :Optional :deltaDeltaPhi
+ [-z[deltaz] delz (5 ).as(Real ) ] :Essential :deltaz
+ [-n[Molecule] nMolecule (1 ).as(Integer ) ] :Essential :NumberOfMolecules
+ [-nx nx (1 ).as(Integer ) ] :Optional :Pixel[Def:]
+ [-ny ny (1 ).as(Integer ) ] :Optional :Pixel[Def:]
+ [-nz nz (1 ).as(Integer ) ] :Optional :Pixel[Def:]
+ [-Sx[tart] Startx (0.0 ).as(Real ) ] :Optional :Startx[A]
+ [-Sy[tart] Starty (0.0 ).as(Real ) ] :Optional :Starty[A]
+ [-Sz[tart] Startz (0.0 ).as(Real ) ] :Optional :Startz[A]
+ [-w[eight] Weight (1.0 ).as(Real ) ] :Optional :Weight
+ [-dx dx (2.5 ).as(Real ) ] :Optional :dx
+ [-dy dy (2.5 ).as(Real ) ] :Optional :dy
+ [-dz dz (2.5 ).as(Real ) ] :Optional :dz
+ [-startn startn (0 ).as(Integer ) ] :Optional :start molecule's index
+ [-startC startID (A ).as(Character ) ] :Optional :start chain ID
+ [-deltaSeq deltaSeq (1000 ).as(Integer ) ] :Optional :start chain ID
+ [-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
+ [-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode
+</PRE>
+</BODY>
+</HTML>
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