X-Git-Url: http://git.osdn.net/view?a=blobdiff_plain;f=doc%2FSmallTools%2FmrcImageVarianceMap.html;h=e019480245ccf091335d6c25d2a2de26a35fb702;hb=HEAD;hp=536942d5af06926be3366ab67d01e49532ba628e;hpb=159fdcd23501c2ecdac036404a4018fc902655a5;p=eos%2Foptional.git

diff --git a/doc/SmallTools/mrcImageVarianceMap.html b/doc/SmallTools/mrcImageVarianceMap.html
index 536942d..e019480 100644
--- a/doc/SmallTools/mrcImageVarianceMap.html
+++ b/doc/SmallTools/mrcImageVarianceMap.html
@@ -8,17 +8,25 @@
 <PRE>
 Usage: mrcImageVarianceMap
 Options:
-    [-i[nput]            In                  (NULL      )] :Optional  :In: InputList
-    [-I[nput]            In2                 (NULL      )In2Var              (NULL      )In2N                (0         )] :Optional  :In: Input
-    [-Nor[malizingParameter]NorA                (0.0       )NorB                (1.0       )] :Optional  :In: A + B*x: NormalizingParameter
-    [-r[ef]              Ref                 (NULL      )] :Optional  :Ref: InputList
-    [-R[ef]              Ref2                (NULL      )Ref2Var             (NULL      )Ref2N               (0         )] :Optional  :Ref: Input
-    [-Nor[malizingParameter]RNorARef             (0.0       )NorBRef             (1.0       )] :Optional  :In: A + B*x: NormalizingParameter for Ref
-    [-I[and]R            InAndRef2           (NULL      )InAndRef2Var        (NULL      )InAndRef2N          (0         )] :Optional  :In and Ref: Input
-    [-o[utput]           Out                 (NULL      )] :Optional  :Output: Variance Probability
-    [-v[arianceMap]      OutV                (NULL      )] :Optional  :Output: Variance Map
-    [-c[onfig]           configFile          (NULL      )] :Optional  :ConfigurationFile
-    [-m[ode]             mode                (0         )] :Optional  :Mode
+    [-i[nput]            In                  (NULL      ).as(inFileList          ) ] :Optional  :In: InputList
+    [-I[nput]            In2                 (NULL      ).as(inFile              ) 
+                         In2Var              (NULL      ).as(inFile              ) 
+                         In2N                (0         ).as(Integer             ) ] :Optional  :In: Input
+    [-Nor[malizingParameter]NorA                (0.0       ).as(Real                ) 
+                         NorB                (1.0       ).as(Real                ) ] :Optional  :In: A + B*x: NormalizingParameter
+    [-r[ef]              Ref                 (NULL      ).as(inFileList          ) ] :Optional  :Ref: InputList
+    [-R[ef]              Ref2                (NULL      ).as(inFile              ) 
+                         Ref2Var             (NULL      ).as(inFile              ) 
+                         Ref2N               (0         ).as(Integer             ) ] :Optional  :Ref: Input
+    [-Nor[malizingParameter]RNorARef             (0.0       ).as(Real                ) 
+                         NorBRef             (1.0       ).as(Real                ) ] :Optional  :In: A + B*x: NormalizingParameter for Ref
+    [-I[and]R            InAndRef2           (NULL      ).as(inFile              ) 
+                         InAndRef2Var        (NULL      ).as(inFile              ) 
+                         InAndRef2N          (0         ).as(Integer             ) ] :Optional  :In and Ref: Input
+    [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Optional  :Output: Variance Probability
+    [-v[arianceMap]      OutV                (NULL      ).as(outFile             ) ] :Optional  :Output: Variance Map
+    [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
+    [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
 ----- Additional Usage -----
 ---- Variance Map -----
 -- Algorithm