Modify: Change dirctory name, because it inclides space.
renamed: Small Tools/Display2/Input-121p-shiftr.2d -> SmallTools/Display2/Input-121p-shiftr.2d
renamed: Small Tools/Display2/Input-1VOM-N-2D.mrc -> SmallTools/Display2/Input-1VOM-N-2D.mrc
renamed: Small Tools/Template/Makefile/Makefile -> SmallTools/Template/Makefile/Makefile
renamed: Small Tools/Template/Makefile/Makefile-lib -> SmallTools/Template/Makefile/Makefile-lib
renamed: Small Tools/ctfDisplay/example.fft -> SmallTools/ctfDisplay/example.fft
renamed: Small Tools/ctfDisplay/example.mrc -> SmallTools/ctfDisplay/example.mrc
renamed: Small Tools/mrcImage/Makefile -> SmallTools/mrcImage/Makefile
renamed: Small Tools/mrcImage/mrcImageFourierNeighborCorrelation/Makefile/Makefile -> SmallTools/mrcImage/mrcImageFourierNeighborCorrelation/Makefile/Makefile
renamed: Small Tools/mrcImage/mrcImageFourierNeighborCorrelation/Makefile/Makefile-lib -> SmallTools/mrcImage/mrcImageFourierNeighborCorrelation/Makefile/Makefile-lib
renamed: Small Tools/mrcImage/mrcImageROI3D/Makefile/Makefile -> SmallTools/mrcImage/mrcImageROI3D/Makefile/Makefile
renamed: Small Tools/mrcImage/mrcImageROI3D/Makefile/Makefile-lib -> SmallTools/mrcImage/mrcImageROI3D/Makefile/Makefile-lib
renamed: Small Tools/mrcImage/mrcImageRandomParticlesImageCreate/Makefile/Makefile -> SmallTools/mrcImage/mrcImageRandomParticlesImageCreate/Makefile/Makefile
renamed: Small Tools/mrcImage/mrcImageRandomParticlesImageCreate/Makefile/Makefile-lib -> SmallTools/mrcImage/mrcImageRandomParticlesImageCreate/Makefile/Makefile-lib
renamed: Small Tools/mrcImage/mrcImageSpatialFrequencyFilter/Makefile/Makefile -> SmallTools/mrcImage/mrcImageSpatialFrequencyFilter/Makefile/Makefile
renamed: Small Tools/mrcImage/mrcImageSpatialFrequencyFilter/Makefile/Makefile-lib -> SmallTools/mrcImage/mrcImageSpatialFrequencyFilter/Makefile/Makefile-lib
modified: TIPS/LoopCommand/Makefile/Makefile
modified: TIPS/LoopCommand/Makefile/Makefile-lib
modified: TIPS/Makefile