set auto_index(menuMultiRoiAllDeleteCommand) [list source [file join $dir Display2MenuROI.wish]]
set auto_index(menuMultiRoiDeleteCommand) [list source [file join $dir Display2MenuROI.wish]]
set auto_index(menuEditCreate) [list source [file join $dir Display2MenuROI.wish]]
+set auto_index(fft2dCmd) [list source [file join $dir fft2dCmd.wish]]
set auto_index(layerLineRecreate) [list source [file join $dir LayerLineUtil.wish]]
set auto_index(layerLineCreate) [list source [file join $dir LayerLineUtil.wish]]
set auto_index(layerLineClear) [list source [file join $dir LayerLineUtil.wish]]
set auto_index(sectionClear) [list source [file join $dir SectionUtil.wish]]
set auto_index(sectionChange) [list source [file join $dir SectionUtil.wish]]
set auto_index(unitCellRecreate) [list source [file join $dir UnitCell.wish]]
-set auto_index(fft2dCmd) [list source [file join $dir fft2dCmd.wish]]
X86MAC64/lmrcImageSolventFlattening.o:lmrcImageSolventFlattening.o
X86MAC64/lmrcImageSphere.o:lmrcImageSphere.o
X86MAC64/lmrcImageSplit.o:lmrcImageSplit.o
+X86MAC64/lmrcImageStack.o:lmrcImageStack.o
X86MAC64/lmrcImageStudentCalculate.o:lmrcImageStudentCalculate.o
X86MAC64/lmrcImageSubtractionCalc.o:lmrcImageSubtractionCalc.o
X86MAC64/lmrcImageSummationCalculate.o:lmrcImageSummationCalculate.o
lmrcImageSolventFlattening.c \
lmrcImageSphere.c \
lmrcImageSplit.c \
+lmrcImageStack.c \
lmrcImageStudentCalculate.c \
lmrcImageSubtractionCalc.c \
lmrcImageSummationCalculate.c \
lmrcImageSolventFlattening.o \
lmrcImageSphere.o \
lmrcImageSplit.o \
+lmrcImageStack.o \
lmrcImageStudentCalculate.o \
lmrcImageSubtractionCalc.o \
lmrcImageSummationCalculate.o \
lmrcImageSolventFlattening.sharedo \
lmrcImageSphere.sharedo \
lmrcImageSplit.sharedo \
+lmrcImageStack.sharedo \
lmrcImageStudentCalculate.sharedo \
lmrcImageSubtractionCalc.sharedo \
lmrcImageSummationCalculate.sharedo \
X86MAC64/lmrcImageSolventFlattening.o \
X86MAC64/lmrcImageSphere.o \
X86MAC64/lmrcImageSplit.o \
+X86MAC64/lmrcImageStack.o \
X86MAC64/lmrcImageStudentCalculate.o \
X86MAC64/lmrcImageSubtractionCalc.o \
X86MAC64/lmrcImageSummationCalculate.o \
X86MAC64/lmrcImageSolventFlattening.sharedo \
X86MAC64/lmrcImageSphere.sharedo \
X86MAC64/lmrcImageSplit.sharedo \
+X86MAC64/lmrcImageStack.sharedo \
X86MAC64/lmrcImageStudentCalculate.sharedo \
X86MAC64/lmrcImageSubtractionCalc.sharedo \
X86MAC64/lmrcImageSummationCalculate.sharedo \
lmrcImageSolventFlattening.debugo \
lmrcImageSphere.debugo \
lmrcImageSplit.debugo \
+lmrcImageStack.debugo \
lmrcImageStudentCalculate.debugo \
lmrcImageSubtractionCalc.debugo \
lmrcImageSummationCalculate.debugo \
X86MAC64/lmrcImageSolventFlattening.debugo \
X86MAC64/lmrcImageSphere.debugo \
X86MAC64/lmrcImageSplit.debugo \
+X86MAC64/lmrcImageStack.debugo \
X86MAC64/lmrcImageStudentCalculate.debugo \
X86MAC64/lmrcImageSubtractionCalc.debugo \
X86MAC64/lmrcImageSummationCalculate.debugo \
lmrcImageSolventFlattening.cudagdb.o \
lmrcImageSphere.cudagdb.o \
lmrcImageSplit.cudagdb.o \
+lmrcImageStack.cudagdb.o \
lmrcImageStudentCalculate.cudagdb.o \
lmrcImageSubtractionCalc.cudagdb.o \
lmrcImageSummationCalculate.cudagdb.o \
X86MAC64/lmrcImageSolventFlattening.cudagdb.o \
X86MAC64/lmrcImageSphere.cudagdb.o \
X86MAC64/lmrcImageSplit.cudagdb.o \
+X86MAC64/lmrcImageStack.cudagdb.o \
X86MAC64/lmrcImageStudentCalculate.cudagdb.o \
X86MAC64/lmrcImageSubtractionCalc.cudagdb.o \
X86MAC64/lmrcImageSummationCalculate.cudagdb.o \
--- /dev/null
+../lmrcImageStack.c
\ No newline at end of file
/* in mrcImageSectionSet.c */
extern void mrcImageSectionSet(mrcImage* dst, mrcImage* src, mrcImageParaTypeReal z, long mode);
-
extern double lmrcImageMaxDataGet(mrcImage* src, long mode);
+/* in lmrcImageStack.c */
+extern void lmrcImageStackAlloc(mrcImage* dst, mrcImage* src, int N, int* sp, int mode);
+extern void lmrcImageStackPush(mrcImage* dst, mrcImage* src, int* sp, int mode);
+
/* prototype end */
#ifdef __cplusplus
--- /dev/null
+# Tcl autoload index file, version 2.0
+# This file is generated by the "auto_mkindex" command
+# and sourced to set up indexing information for one or
+# more commands. Typically each line is a command that
+# sets an element in the auto_index array, where the
+# element name is the name of a command and the value is
+# a script that loads the command.
+
+set auto_index(Blt_ActiveLegend) [list source [file join $dir bltGraph.wish]]
+set auto_index(Blt_Crosshairs) [list source [file join $dir bltGraph.wish]]
+set auto_index(Blt_ZoomStack) [list source [file join $dir bltGraph.wish]]
+set auto_index(Blt_PrintKey) [list source [file join $dir bltGraph.wish]]
+set auto_index(Blt_ClosestPoint) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::ActivateLegend) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::DeactivateLegend) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::HighlightLegend) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::Crosshairs) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::ZoomStack) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::PrintKey) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::ClosestPoint) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::AddBindTag) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::FindElement) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::FlashPoint) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::GetCoords) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::MarkPoint) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::DestroyZoomTitle) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::PopZoom) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::PushZoom) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::ResetZoom) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::ZoomTitleNext) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::ZoomTitleLast) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::SetZoomPoint) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::Box) [list source [file join $dir bltGraph.wish]]
+set auto_index(Blt_PostScriptDialog) [list source [file join $dir bltGraph.wish]]
+set auto_index(::blt::ResetPostScript) [list source [file join $dir bltGraph.wish]]
+set auto_index(Canvas) [list source [file join $dir Canvas.wish]]
+set auto_index(scrolledCanvas) [list source [file join $dir Canvas.wish]]
+set auto_index(colormapSet) [list source [file join $dir Colormap.wish]]
+set auto_index(CommandEntry) [list source [file join $dir CommandEntry.wish]]
+set auto_index(CommandEntryWithSelection) [list source [file join $dir CommandEntry.wish]]
+set auto_index(CommandEntryWithSelectionEntrySet) [list source [file join $dir CommandEntry.wish]]
+set auto_index(CommandEntryWithUpDown) [list source [file join $dir CommandEntry.wish]]
+set auto_index(CommandEntryWithUpDownUp) [list source [file join $dir CommandEntry.wish]]
+set auto_index(CommandEntryWithUpDownDown) [list source [file join $dir CommandEntry.wish]]
+set auto_index(eosCommandExecute) [list source [file join $dir commandUtil.wish]]
+set auto_index(::CTF::Init) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::Win) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoGraphInfoFrameCreate) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoGraphInfoFrameCreate1) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoGraphInfoFrameCreate2) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoSaveAsPS) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoSave) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoLoad) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoMolecEnvSet) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoCTFInfoFrameCreate) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoCTFInfoFrameCreate1) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInitSearch) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfFineTuning) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoCTFInfoFrameCreate2) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoMarkerSet) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoMarkerUnset) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoPredictedThonRing) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoPredictedMarkerOnCanvas) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoPredictedMarkerSet) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoPredictedMarkerUnset) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoMarkerReset) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoGraphUpdate) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoScatteringLineCreate) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoCTFLineCreate) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoGraphConfiguration) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoGraphPenCreate) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoCTFInfomationSet) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoCTFCalculation) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoScatteringCalc) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoListGet) [list source [file join $dir ctfInfo.wish]]
+set auto_index(::CTF::ctfInfoAppend) [list source [file join $dir ctfInfo.wish]]
+set auto_index(fileSaveSureWin) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveSureOK) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveSureCancel) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveSureWinResources) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSave) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveResources) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveBindings) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveList) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveOK) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveCancel) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveClick) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveTake) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSaveComplete) [list source [file join $dir fileSave.wish]]
+set auto_index(fileSelect) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileSelectResources) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileSelectBindings) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileSelectList) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileSelectOK) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileSelectCancel) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileSelectClick) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileSelectTake) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileSelectComplete) [list source [file join $dir fileSelect.wish]]
+set auto_index(fileCanBeOverwritten) [list source [file join $dir fileUtil.wish]]
+set auto_index(relativePathGet) [list source [file join $dir fileUtil.wish]]
+set auto_index(bltResetBindings) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltActivateLegend) [list source [file join $dir graphFeature.wish]]
+set auto_index(SetActiveLegend) [list source [file join $dir graphFeature.wish]]
+set auto_index(SetCrosshairs) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltFindElement) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltFlashPoint) [list source [file join $dir graphFeature.wish]]
+set auto_index(SetClosestPoint) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltGetCoords) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltGetAnchor) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltGetAnchorX) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltBox) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltBoxX) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltScan) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltScanX) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltZoom) [list source [file join $dir graphFeature.wish]]
+set auto_index(bltZoomX) [list source [file join $dir graphFeature.wish]]
+set auto_index(SetZoom) [list source [file join $dir graphFeature.wish]]
+set auto_index(SetZoomX) [list source [file join $dir graphFeature.wish]]
+set auto_index(SetPrint) [list source [file join $dir graphFeature.wish]]
+set auto_index(seqFileTemplateChange) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelect) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectBindings) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectList) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileTemplateSelectOK) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileTemplateSelectComplete) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectOK) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectComplete) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectPrev) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectNext) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectCancel) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectClick) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(seqFileSelectTake) [list source [file join $dir seqFileSelect.wish]]
+set auto_index(NotSupportedCommand) [list source [file join $dir tclUtil.wish]]
+set auto_index(CheckButtonsCreateWithPack) [list source [file join $dir VariousButton.wish]]
+set auto_index(RadioButtonsCreateWithPack) [list source [file join $dir VariousButton.wish]]
+set auto_index(RadioButtonsCreateWithPackWithCommand) [list source [file join $dir VariousButton.wish]]
+set auto_index(RadioButtonsCreate) [list source [file join $dir VariousButton.wish]]
+set auto_index(CheckButtonsCreate) [list source [file join $dir VariousButton.wish]]
<H2>Information from source codes</H2>
</A>
<PRE>
-../src/fftn.c:
-
-../src/lmrcFETnormalizeBySD.c:
-
-../src/lmrcFFTExpression.c:
-
-../src/lmrcFFTFGconj.c:
-
-../src/lmrcFFTFxG.c:
-
-../src/lmrcFFTInfo.c:
-
-../src/lmrcImage3DPad.c:
-
-../src/lmrcImage3DWindowing.c:
-
-../src/lmrcImageAddValue.c:
-
-../src/lmrcImageAsProbability.c:
-
-../src/lmrcImageAverage.c:
-
-../src/lmrcImageBandPassFilter.c:
-
-../src/lmrcImageBilateralFilter.c:
-
-../src/lmrcImageBinarization.c:
-
-../src/lmrcImageBottomHatTransform.c:
-
-../src/lmrcImageBoundaryInfo.c:
-
-../src/lmrcImageCTFCompensation.c:
-
-../src/lmrcImageCTFDetermination.c:
-
-../src/lmrcImageCTFObservation.c:
-
-../src/lmrcImageCTFSN.c:
-
-../src/lmrcImageCVE.c:
-
-../src/lmrcImageCalcArea.c:
-
-../src/lmrcImageCenterGet.c:
-
-../src/lmrcImageCentre.c:
-
-../src/lmrcImageClosing.c:
-
-../src/lmrcImageClusterAnalysis.c:
-
-../src/lmrcImageCommonLine.c:
-
-../src/lmrcImageConnection.c:
-
-../src/lmrcImageConnectivityNumberCalc.c:
-
-../src/lmrcImageContourSurface.c:
-
-../src/lmrcImageContraction.c:
-
-../src/lmrcImageCorrelation.c:
- $lmrcImageEuclidDistanceCalc: Calculate Euclid distance between two images $
- $arg: in1: input mrcImage1 $
- $arg: in2: input mrcImage2 $
- $arg: mode: input int $
- $mode: 0 Sum of SQR $
- $mode: 1 Distance $
- $return: EuclidDistance $
-
-../src/lmrcImageCorrelationPVM.c:
-
-../src/lmrcImageCorrelationWithCTFCompensation.c:
-
-../src/lmrcImageCorrelationinSpace.c:
-
-../src/lmrcImageCrystalCreate.c:
-
-../src/lmrcImageDataMaxAndMinGetByImage.c:
-
-../src/lmrcImageDataStraightCopy.c:
-
-../src/lmrcImageDeconvolution.c:
-
-../src/lmrcImageDensity.c:
-
-../src/lmrcImageDensityInverse.c:
-
-../src/lmrcImageDensityNormalizationByImage.c:
-
-../src/lmrcImageDifferential.c:
-
-../src/lmrcImageDilation.c:
-
-../src/lmrcImageDistanceConversion.c:
-
-../src/lmrcImageEdge.c:
-
-../src/lmrcImageEdgeAverage.c:
-
-../src/lmrcImageEdgeEnhancement.c:
-
-../src/lmrcImageErosion.c:
-
-../src/lmrcImageFFT.c:
-
-../src/lmrcImageFOMCalc.c:
-
-../src/lmrcImageFeatureExtraction.c:
-
-../src/lmrcImageFeatureExtractionCoOccurrence.c:
-
-../src/lmrcImageFeatureExtractionRunLength.c:
-
-../src/lmrcImageFilterCreate.c:
-
-../src/lmrcImageFirstNoiseReductionByRelaxation.c:
-
-../src/lmrcImageFloating.c:
-
-../src/lmrcImageFourierPowerSpectrum.c:
-
-../src/lmrcImageFourierShellCorrelation.c:
-
-../src/lmrcImageHighPassFilter.c:
-
-../src/lmrcImageHighlighting.c:
-
-../src/lmrcImageLabeling.c:
-
-../src/lmrcImageLogicalOperation.c:
-
-../src/lmrcImageLowPassFilter.c:
-
-../src/lmrcImageMasking.c:
-
-../src/lmrcImageMaxDataGet.c:
-
-../src/lmrcImageMirroring.c:
- $lmrcImageMirroring: (mrcImage* out, mrcImage* in, lmrcImageMirroring mode) $
-
-../src/lmrcImageModeChange.c:
-
-../src/lmrcImageModelCreate.c:
-
-../src/lmrcImageMontageCreate.c:
-
-../src/lmrcImageMorphology.c:
-
-../src/lmrcImageMove.c:
-
-../src/lmrcImageMultiCTFCompensation.c:
-
-../src/lmrcImageMultiplying.c:
-
-../src/lmrcImageNegativeLaplacian.c:
-
-../src/lmrcImageNormalizing.c:
-
-../src/lmrcImageOneLineSimilarityCalc.c:
-
-../src/lmrcImageOpening.c:
-
-../src/lmrcImagePad.c:
-
-../src/lmrcImagePartImageSegmentation.c:
-
-../src/lmrcImagePixelSummationOfProbabilityGetByImage.c:
-
-../src/lmrcImagePosterization.c:
-
-../src/lmrcImagePrewitt.c:
-
-../src/lmrcImageProjection.c:
-
-../src/lmrcImageProportionalDensityLevelSetByImage.c:
-
-../src/lmrcImageROI2D.c:
-
-../src/lmrcImageROI3D.c:
-
-../src/lmrcImageROInotChangeHeaderLength.c:
-
-../src/lmrcImageRadialDistribution.c:
-
-../src/lmrcImageRhoFiltering.c:
-
-../src/lmrcImageRoberts.c:
-
-../src/lmrcImageRotation.c:
-
-../src/lmrcImageSSDA.c:
-
-../src/lmrcImageSamplingUnitChange.c:
-
-../src/lmrcImageSecondNoiseReductionByRelaxation.c:
-
-../src/lmrcImageSecondNoiseReductionByRelaxationDijDimensionSet.c:
-
-../src/lmrcImageSecondNoiseReductionByRelaxationDijValueCalculate.c:
-
-../src/lmrcImageSecondNoiseReductionByRelaxationDijValueSet.c:
-
-../src/lmrcImageSecondNoiseReductionByRelaxationQValueSet.c:
-
-../src/lmrcImageSecondNoiseReductionByRelaxationRValueSet.c:
-
-../src/lmrcImageShapePCA.c:
-
-../src/lmrcImageShift.c:
-
-../src/lmrcImageShrink.c:
-
-../src/lmrcImageSigmaCalculate.c:
-
-../src/lmrcImageSinogram.c:
-
-../src/lmrcImageSinogramCorrelation.c:
-
-../src/lmrcImageSinogramFFT.c:
-
-../src/lmrcImageSmoothing.c:
-
-../src/lmrcImageSobel.c:
-
-../src/lmrcImageSolventFlattening.c:
-
-../src/lmrcImageSphere.c:
-
-../src/lmrcImageSplit.c:
-
-../src/lmrcImageStudentCalculate.c:
-
-../src/lmrcImageSubtractionCalc.c:
-
-../src/lmrcImageSummationCalculate.c:
-
-../src/lmrcImageSymmetryFind.c:
-
-../src/lmrcImageTfunction.c:
-
-../src/lmrcImageTopHatTransform.c:
-
-../src/lmrcImageTrans.c:
-
-../src/lmrcImageTransformDescartesIntoPolar.c:
-
-../src/lmrcImageTriming.c:
-
-../src/lmrcImageVolumeCalc.c:
-
-../src/lmrcImageWindowing.c:
-
-../src/lmrcImagesFTest.c:
-
-../src/lmrcImagesStatDataGet.c:
-
-../src/lmrcImagesTTest.c:
-
-../src/lmrcImagesVarianceAnalysis.c:
-
-../src/lmrcImagesVarianceMap.c:
-
-../src/lmrcSinogramFET.c:
-
-../src/lmrcSinogramFETPCA.c:
-
-../src/lmrcSinogramFETcalcWeight.c:
-
-../src/lmrcSinogramFETcorrelationMap.c:
-
-../src/lmrcSinogramFETnormalizedMap.c:
-
-../src/lmrcSinogramFETreferredCorrelation.c:
-
-../src/lmrcSinogramFETsmoothParameterMatching.c:
-
-../src/mrcImageCheckFFT.c:
-
-../src/mrcImageCheckSameSize.c:
-
-../src/mrcImageCopy.c:
-
-../src/mrcImageDataSet.c:
-
-../src/mrcImageError.c:
-
-../src/mrcImageGet.c:
-
-../src/mrcImageGetPixels.c:
-
-../src/mrcImageInfo.c:
-
-../src/mrcImageInit.c:
-
-../src/mrcImageOperation.c:
-
-../src/mrcImagePVM.c:
-
-../src/mrcImagePrint.c:
-
-../src/mrcImageRead.c:
-
-../src/mrcImageSectionGet.c:
-
-../src/mrcImageSectionSet.c:
-
-../src/mrcImageSet.c:
-
-../src/mrcImageTailer.c:
-
-../src/mrcImageToIntImage.c:
-
-../src/mrcImageUtil.c:
-
-../src/mrcImageUtilityforVariance.c:
-
-../src/mrcImageWrite.c:
-
-../src/mrcImageWrite2.c:
-
-../src/mrcImagefuncmin.c:
-
-../src/mrcRefUtil.c:
</PRE>
<HR>
<A NAME="include">
/* in mrcImageSectionSet.c */
extern void mrcImageSectionSet(mrcImage* dst, mrcImage* src, mrcImageParaTypeReal z, long mode);
-
extern double lmrcImageMaxDataGet(mrcImage* src, long mode);
+/* in lmrcImageStack.c */
+extern void lmrcImageStackAlloc(mrcImage* dst, mrcImage* src, int N, int* sp, int mode);
+extern void lmrcImageStackPush(mrcImage* dst, mrcImage* src, int* sp, int mode);
+
/* prototype end */
#ifdef __cplusplus
/* in mrcImageSectionSet.c */
extern void mrcImageSectionSet(mrcImage* dst, mrcImage* src, mrcImageParaTypeReal z, long mode);
-
extern double lmrcImageMaxDataGet(mrcImage* src, long mode);
+/* in lmrcImageStack.c */
+extern void lmrcImageStackAlloc(mrcImage* dst, mrcImage* src, int N, int* sp, int mode);
+extern void lmrcImageStackPush(mrcImage* dst, mrcImage* src, int* sp, int mode);
+
/* prototype end */
#ifdef __cplusplus
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% lmrcImageStack ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : lmrcImageStack
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%lmrcImageStack ver%I%; Date:%D% %Z%";
+#include <stdio.h>
+#include <stdlib.h>
+#include "../inc/mrcImage.h"
+
+
+void
+lmrcImageStackAlloc(mrcImage* dst, mrcImage* src, int N, int* sp, int mode)
+{
+ mrcImageParaTypeReal x, y;
+ double data;
+
+ dst->Header = src->Header;
+ if(1!=dst->HeaderN.z) {
+ fprintf(stderr, "lmrcImageStackAlloc: not supported 3D stack, just 2D stack\n");
+ exit(EXIT_FAILURE);
+ }
+ dst->HeaderN.z = N;
+ mrcInit(dst, NULL);
+
+ *sp = 0;
+
+ for(x=0; x<dst->HeaderN.x; x++) {
+ for(y=0; y<dst->HeaderN.y; y++) {
+ mrcPixelDataGet(src, x, y, 0, &data, mrcPixelRePart, mrcPixelHowNearest);
+ mrcPixelDataSet(dst, x, y, *sp, data, mrcPixelRePart);
+ }
+ }
+}
+
+void
+lmrcImageStackPush(mrcImage* dst, mrcImage* src, int* sp, int mode)
+{
+ mrcImageParaTypeReal x, y;
+ double data;
+
+ if(dst->HeaderN.x!=src->HeaderN.x
+ ||dst->HeaderN.y!=src->HeaderN.y) {
+ fprintf(stderr, "Size not different: dst %d %d src %d %d\n",
+ dst->HeaderN.x, dst->HeaderN.y,
+ src->HeaderN.x, src->HeaderN.y);
+ exit(EXIT_FAILURE);
+ }
+
+ *sp += 1;
+ if(dst->HeaderN.z<=*sp) {
+ fprintf(stderr, "Stack Overflow: %d : max %d\n", *sp, dst->HeaderN.z);
+ exit(EXIT_FAILURE);
+ }
+
+ for(x=0; x<dst->HeaderN.x; x++) {
+ for(y=0; y<dst->HeaderN.y; y++) {
+ mrcPixelDataGet(src, x, y, 0, &data, mrcPixelRePart, mrcPixelHowNearest);
+ mrcPixelDataSet(dst, x, y, *sp, data, mrcPixelRePart);
+ }
+ }
+}
WORLDNAME=Tools
WORLDNAME=Tools
WORLDNAME=Tools
+WORLDNAME=Tools
+++ /dev/null
-include ../Config/Define.inc
-include Config/Define.inc
-include .Source
-
-include Config/Target.inc
--- /dev/null
+/Users/tacyas/Eos/src/Config/Template/ToolsHomeTemplate.Dir/Makefile
\ No newline at end of file
+++ /dev/null
-include ../../Config/Define.inc
-include ../Config/Define.inc
-include Config/Define.inc
-include .Source
-
-all:
- for dir in ${SOURCE} ; \
- do \
- if [ -d $${dir} ] ; then \
- $(CD) $${dir}; make all; $(CD) ..; \
- fi \
- done
-
-install:
- for dir in ${SOURCE} ; \
- do \
- if [ -d $${dir} ] ; then \
- $(CD) $${dir}; make install; $(CD) ..; \
- fi \
- done
-
-put:
- for dir in ${SOURCE} ; \
- do \
- if [ -d $${dir} ] ; then \
- $(CD) $${dir}; make put; $(CD) ..; \
- fi \
- done
-
-putSF:
- if [ -f private ] ; then \
- echo "$(WORLDNAME)/$(CLASSNAME) is private " ; \
- else \
- for dir in ${SOURCE} ; \
- do \
- if [ -d $${dir} ] ; then \
- $(CD) $${dir}; make putSF; $(CD) ..; \
- fi \
- done \
- fi
-
-clean:
- for dir in ${SOURCE} ; \
- do \
- $(CD) $${dir}; make clean; $(CD) ..; \
- done
-
-check:
- @for dir in ${SOURCE} ; do \
- if [ -d $${dir} ] ; then \
- $(CD) $${dir}; \
- echo $${dir}; \
- $(RM) Makefile; \
- $(CP) ../../../Config/Template/$(WORLDNAME)Template.Dir/Makefile Makefile ; \
- make check; \
- $(CD) ..; \
- fi \
- done
-
-depend: check
- @for dir in ${SOURCE} ; \
- do \
- $(CD) $${dir}; make depend; $(CD) ..; \
- done
-
-backup:
- cd ../../..; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/Config; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/Makefile; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/.[A-z]*
- tar uvf ${EOS_HOME}/backup/EosBase.tar .[A-z]*
- @for dir in ${SOURCE} ; \
- do \
- $(CD) $${dir}; make backup; $(CD) ..; \
- done
-
-backup-all:
- cd ../../..; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/Config; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/Makefile; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/.[A-z]*
- tar rvf ${EOS_HOME}/backup/EosBase.tar .[A-z]*
- @for dir in ${SOURCE} ; \
- do \
- $(CD) $${dir}; make backup; $(CD) ..; \
- done
-
-distribute:
- cd ../../..; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/Config; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/Makefile; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/.[A-z]*
- @for dir in ${SOURCE} ; \
- do \
- $(CD) $${dir}; make distribute; $(CD) ..; \
- done
-
-distribute-all:
- cd ../../..; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/Config; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/Makefile; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/.[A-z]*
- @for dir in ${SOURCE} ; \
- do \
- $(CD) $${dir}; make distribute-all; $(CD) ..; \
- done
-
--- /dev/null
+/Users/tacyas/Eos/src/Config/Template/ToolsClassTemplate.Dir/Makefile
\ No newline at end of file
# OptionControlFile
# FileFormat
-"-I","-I[nput array of file]","InputDataFiles","Optional","1","1","In","inFileListNoOpen","stdin"
-"-o","-o[utput]","OutputDataFile","Essential","1","1","Out","outFile","NULL"
+"-I","-I[nput array of file]","InputDataFiles","Optional","1","1","In","inFileListNoOpen::mrcImage","stdin"
+"-o","-o[utput]","OutputDataFile","Essential","1","1","Out","outFile::mrcImage","NULL"
"-c","-c[onfig]","ConfigurationFile","Optional","1","1","configFile","inFile","NULL"
"-m","-m[ode]","Mode","Optional","1","1","mode","Integer","0"
+++ /dev/null
-include ../../../Config/Define.inc
-include ../../Config/Define.inc
-include ../Config/Define.inc
-include Config/Define.inc
-
-all:
- cd src; make all; cd ..
-
-install:
- cd src; make install; cd ..
-
-
-putSF:
- if [ -f private ] ; \
- then \
- echo "$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME) is private"; \
- else \
- cvs -z4 -d:ext:$$USER@$$EOS_SOURCEFORGE commit || cvs -z4 -d:ext:$$USER@$$EOS_SOURCEFORGE import src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME); \
- fi
-
-put:
- cd src; make put; cd ..
-
-clean:
- cd src; make clean; cd ..
-
-depend:
- cd src; make depend; cd ..
-
-check:
- @if [ ! -d $(EOS_HOME)/hostdepend/$(OSTYPE)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/$(OSTYPE) ] ; then \
- echo making directory; \
- mkdir -p $(EOS_HOME)/hostdepend/$(OSTYPE)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/$(OSTYPE); \
- fi
- ln -sf ../../../../../hostdepend/$(OSTYPE)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/$(OSTYPE) src/$(OSTYPE);
- @$(RM) src/Makefile
- @echo "New src/Makefile"
- @$(CP) ../../../Config/Template/$(WORLDNAME)Template.Dir/src/Makefile src/Makefile
- @cd src; touch $(OSTYPE)/.Depend; make depend
-
-cvsupdate::
- cvs -d $(EOS_CVSROOT) update -d
-
-cvscommit::
- cvs -d $(EOS_CVSROOT) commit
-
-backup:
- @cd ../../../..; \
- echo $(OBJECTNAME) ; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config ; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Makefile ;\
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/.[A-z]* ; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/inc ; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/doc; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/wish; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/[A-z]*.[A-z]*; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/.[A-z]*; \
- tar uvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/Makefile
-
-backup-all:
- @cd ../../../..; \
- echo $(OBJECTNAME) ; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config ; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Makefile ;\
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/.[A-z]* ; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/inc ; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/doc; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/wish; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/[A-z]*.[A-z]*; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/.[A-z]*; \
- tar rvf ${EOS_HOME}/backup/EosBase.tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/Makefile
-
-distribute:
- cd ../../../..; \
- echo $(OBJECTNAME) ; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config ; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Makefile ;\
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/.[A-z]* ; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/inc ; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/doc; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/wish; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/[A-z]*.[A-z]*; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/.[A-z]*; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/Makefile ; \
- tar uvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/$(OSTYPE)
-
-distribute-all:
- @cd ../../../..; \
- echo $(OBJECTNAME) ; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config ; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Makefile ;\
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/.[A-z]* ; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/inc ; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/doc; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/wish; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/[A-z]*.[A-z]*; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/.[A-z]*; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/Makefile ; \
- tar rvf ${EOS_HOME}/distribute/src.$(OSTYPE).tar src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/$(OSTYPE)
-
-eosintroduce:
- ${EOS_HOME}/sbin/eosintroduce ${WORLDNAME} ${CLASSNAME} ${OBJECTNAME} ./
-
-include Config/Target.inc
--- /dev/null
+/Users/tacyas/Eos/src/Config/Template/ToolsTemplate.Dir/Makefile
\ No newline at end of file
--- /dev/null
+/Users/tacyas/Eos/src/Config/Template/ToolsTemplate.Dir/doc/Makefile
\ No newline at end of file
long flagRedirect;
long flagIn;
- char* In;
- FILE* fptIn;
+ char** In;
+ char* InList;
+ FILE** fptIn;
+ FILE* fptInList;
long flagOut;
char* Out;
void
argCheck(mrcImageStackInfo* info, int argc, char* argv[])
{
- long i, j, nv;
+ long i;
char s[1024];
+ FILE* fpt;
+
+ if(NULL==(fpt=fopen(".EosLog", "a+"))) {
+
+ } else {
+ for(i=0; i<argc; i++) {
+ fprintf(fpt, "%s ", argv[i]);
+ }
+ fprintf(fpt, "\n");
+ fclose(fpt);
+ }
for(i=1; i<argc; i++) {
if(OPTION_FLAG==argv[i][OPTION_FLAG_POS]) {
SSWITCH(argv[i]+OPTION_POS)
- SCASE("i") {
+ SCASE("I") {
if(i+1<argc) {
- info->In = stringGetNthWord(argv[i+1], 1, " ,");
+ info->InList = stringGetNthWord(argv[i+1], 1, " ,");
i++;
info->flagIn++;
} else {
void
init0(mrcImageStackInfo* info)
{
- info->fptIn = NULL; info->flagIn = 0;
+ info->fptIn = stdin; info->fptInList = stdin; info->flagIn = 0;
info->fptOut = NULL; info->flagOut = 0;
info->fptconfigFile = NULL; info->flagconfigFile = 0;
info->mode = 0; info->flagmode = 0;
{
char s[1024];
int i;
- if(!info->flagIn) {
- stringGetFromFile(s, "In", stdin, stdout, 0);
- info->In = stringGetNthWord(s, 1, " ,");
- info->flagIn++;
- }
if(info->flagIn) {
- info->fptIn = fileOpen(info->In, "r");
+ info->fptInList = fileOpen(info->InList, "r");
+ fseek(info->fptInList, 0L, SEEK_SET);
+ i=0;
+ while(NULL!=stringGetFromFile(s, "", info->fptInList, stdout, 1)) {
+ i++;
+ }
+ info->fptIn = (FILE**)memoryAllocate(i*sizeof(FILE*), "in init1");
+ info->In = (char**)memoryAllocate(i*sizeof(char*), "in init1");
+ info->flagIn = i;
+ fseek(info->fptInList, 0L, SEEK_SET);
+ i=0;
+ while(NULL!=stringGetFromFile(s, "", info->fptInList, stdout, 1)) {
+ info->In[i] = stringGetNthWord(s, 1, " ,\t");
+ i++;
+ }
}
if(!info->flagOut) {
stringGetFromFile(s, "Out", stdin, stdout, 0);
- info->Out = stringGetNthWord(s, 1, " ,");
+ info->Out = stringGetNthWord(s, 1, " ,\t");
info->flagOut++;
}
if(info->flagOut) {
mrcImageStackInfo info;
/* variables */
- mrcImage in1;
- mrcImage in2;
+ mrcImage in;
mrcImage out;
long i;
+ int sp;
/* input patameters ,file open */
init0(&info);
/* begin */
DEBUGPRINT("Program Start\n");
- mrcFileRead(&in1, info.In[0], "in main file", 0);
+
+ mrcFileRead(&in, info.In[0], "in main file", 0);
+ lmrcImageStackAlloc(&out, &in, info.flagIn, &sp, info.mode);
+ mrcImageFree(&in,"");
+
for(i=1; i<info.flagIn; i++) {
- mrcFileRead(&in2, info.In[i], "in main file", 0);
- lmrcImageStack(&in1, &in2);
- mrcImageFree(&in2,"");
- }
- mrcFileWrite(&in1 ,info.Out ,"in main" ,0);
+ mrcFileRead(&in, info.In[i], "in main file", 0);
+ lmrcImageStackPush(&out, &in, &sp, info.mode);
+ DEBUGPRINT1("%d\n", sp);
+ mrcImageFree(&in,"");
+ }
+ mrcFileWrite(&out,info.Out ,"in main" ,0);
exit(EXIT_SUCCESS);
}
-/bin/bash: mrcImageStack: そのようなファイルやディレクトリはありません
+<HTML>
+<HEAD>
+<TITLE>mrcImageStack</TITLE>
+</HEAD>
+<BODY>
+<H1>mrcImageStack</H1>
+<H2>Usage</H2>
+<PRE>
+Usage: mrcImageStack
+Options:
+ [-I[nput array of file]In (stdin ).as(inFileListNoOpen::mrcImage) ] :Optional :InputDataFiles
+ [-o[utput] Out (NULL ).as(outFile::mrcImage ) ] :Essential :OutputDataFile
+ [-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
+ [-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode
+----- Additional Usage -----
+</PRE>
+</BODY>
+</HTML>
-R 1 0 1 5x1+35+0 'Run' 'execute operation' $EOS/bin/mrcImageStack
-H 1 5x1+41+0 'Help' 'help page' $EOS/src/Tools/mrcImage/mrcImageStack/doc/mrcImageStack.doc help
-Q 1 0 5.25x1+47+0 'Close'
- -I 1 0 1 1 0 1 -1x1+1+1.500000 ' ' 'In' 'InputDataFile' i
+ -I 1 0 1 0 0 1 -1x1+1+1.500000 ' ' 'In' 'InputDataFiles' I
-O 1 0 1 1 0 1 -1x1+1+3.000000 ' ' 'Out' 'OutputDataFile' o
-I 1 0 1 0 0 1 -1x1+1+4.500000 ' ' 'configFile' 'ConfigurationFile' c
-i 1 0 1 0 0 -1x1+1+6.000000 0 0 0 0 0 'mode' 'Mode' m
--- /dev/null
+include ../../Config/Define.inc
+include ../../../Config/Define.inc
+include ../../../../Config/Define.inc
+include ../../../../../Config/Define.inc
+
+all: help exec
+
+help:
+ @echo "----- Help Message Check -----"
+ @../$(OSTYPE)/$(OBJECTNAME) -h
+
+exec:
+ @echo "----- Execution Check -----"
+ ../$(OSTYPE)/$(OBJECTNAME) -I data/test.in -o data/test.out
+ @echo "----- Calc check -----"
+
+clean:
+
+init:
+ rm -f data/test.in
+ for i in 00 10 20 30 40 50 60; do \
+ pdb2mrc2d -i data/121p.pdb -o data/121p-$$i.mrc -startEA YOYS $$i 0 0 -d 1.25 1.25 -s -40 -40 -n 64 64 -sig 2.0; \
+ echo "data/121p-$$i.mrc" >> data/test.in; \
+ done
--- /dev/null
+../../../../../..//data/mrcImageStack
\ No newline at end of file
{
fprintf(stderr, "Usage: %s\n", thisProgram);
fprintf(stderr, "Options:\n");
- fprintf(stderr, " [-i[nput] In (NULL )] :Essential :InputDataFile\n");
- fprintf(stderr, " [-o[utput] Out (NULL )] :Essential :OutputDataFile\n");
- fprintf(stderr, " [-c[onfig] configFile (NULL )] :Optional :ConfigurationFile\n");
- fprintf(stderr, " [-m[ode] mode (0 )] :Optional :Mode\n");
+ fprintf(stderr, " [-I[nput array of file]In (stdin ).as(inFileListNoOpen::mrcImage) ] :Optional :InputDataFiles\n");
+ fprintf(stderr, " [-o[utput] Out (NULL ).as(outFile::mrcImage ) ] :Essential :OutputDataFile\n");
+ fprintf(stderr, " [-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile\n");
+ fprintf(stderr, " [-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode\n");
additionalUsage();
}
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