Rebuild for X86LINUX:

	modified:   hostdepend/X86LINUX64/bin/X86LINUX64/*

diff --git a/bin/X86LINUX64/Display2 b/bin/X86LINUX64/Display2
index 34d793a..066a860 100755 (executable)
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diff --git a/bin/X86LINUX64/StereoDisplay b/bin/X86LINUX64/StereoDisplay
new file mode 100755 (executable)
index 0000000..74e210d
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diff --git a/bin/X86LINUX64/array2mrc b/bin/X86LINUX64/array2mrc
index 554567d..c26963c 100755 (executable)
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diff --git a/bin/X86LINUX64/bin2mrc b/bin/X86LINUX64/bin2mrc
index 3246033..66d86d2 100755 (executable)
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diff --git a/bin/X86LINUX64/clusterLog2ToLog b/bin/X86LINUX64/clusterLog2ToLog
index 96489cc..9664841 100755 (executable)
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diff --git a/bin/X86LINUX64/clusterLogASCII2Binary b/bin/X86LINUX64/clusterLogASCII2Binary
index 80d55bc..2134e0b 100755 (executable)
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diff --git a/bin/X86LINUX64/clusterShow b/bin/X86LINUX64/clusterShow
index 6264497..e19957c 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfDeterminationFromThonRing b/bin/X86LINUX64/ctfDeterminationFromThonRing
index 2e56811..4677b61 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfDetermine b/bin/X86LINUX64/ctfDetermine
index d942961..42b8296 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfDisplay b/bin/X86LINUX64/ctfDisplay
index fe3393c..429050c 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfWeightMapCreation b/bin/X86LINUX64/ctfWeightMapCreation
index 36470ab..f842af0 100755 (executable)
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diff --git a/bin/X86LINUX64/dcdAtomChangeDistanceFromAtom b/bin/X86LINUX64/dcdAtomChangeDistanceFromAtom
index 56c047f..987bebc 100755 (executable)
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diff --git a/bin/X86LINUX64/dcdAtomDistanceDistribution b/bin/X86LINUX64/dcdAtomDistanceDistribution
index 5772a43..cf19490 100755 (executable)
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diff --git a/bin/X86LINUX64/dcdFilePrint b/bin/X86LINUX64/dcdFilePrint
index 8d86592..41f410b 100755 (executable)
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diff --git a/bin/X86LINUX64/dcdInfo b/bin/X86LINUX64/dcdInfo
index d18ef57..39ae3b6 100755 (executable)
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diff --git a/bin/X86LINUX64/dcdSelectAtoms b/bin/X86LINUX64/dcdSelectAtoms
index dea6330..55ce2c4 100755 (executable)
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diff --git a/bin/X86LINUX64/dcdSerectAtom b/bin/X86LINUX64/dcdSerectAtom
index 1416ae6..a90c6fd 100755 (executable)
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diff --git a/bin/X86LINUX64/dcdTimeSeriesBehavior b/bin/X86LINUX64/dcdTimeSeriesBehavior
index 5e23206..9cb57d0 100755 (executable)
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diff --git a/bin/X86LINUX64/defocusDeterminationFromThonRing b/bin/X86LINUX64/defocusDeterminationFromThonRing
index c59d24e..70106d9 100755 (executable)
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diff --git a/bin/X86LINUX64/emData2mrc b/bin/X86LINUX64/emData2mrc
index cd6e2fc..d69bb89 100755 (executable)
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diff --git a/bin/X86LINUX64/imagesView b/bin/X86LINUX64/imagesView
index a77d55b..0f8f0d8 100755 (executable)
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diff --git a/bin/X86LINUX64/imodst2mrc b/bin/X86LINUX64/imodst2mrc
index 850da1a..25682e5 100755 (executable)
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diff --git a/bin/X86LINUX64/ip2mrc b/bin/X86LINUX64/ip2mrc
index aca47ad..c8203ab 100755 (executable)
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diff --git a/bin/X86LINUX64/llDataAverage b/bin/X86LINUX64/llDataAverage
index 4059f4b..b91d7b1 100755 (executable)
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diff --git a/bin/X86LINUX64/llDataAxisSearch b/bin/X86LINUX64/llDataAxisSearch
index 1185b49..6f4dd86 100755 (executable)
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diff --git a/bin/X86LINUX64/llDataMultiCTFCompensation b/bin/X86LINUX64/llDataMultiCTFCompensation
index 643969a..17696f9 100755 (executable)
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diff --git a/bin/X86LINUX64/moi2mrc b/bin/X86LINUX64/moi2mrc
index e3d4b3e..886cf8f 100755 (executable)
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diff --git a/bin/X86LINUX64/mrc2fld b/bin/X86LINUX64/mrc2fld
index f4781f9..8b38e65 100755 (executable)
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diff --git a/bin/X86LINUX64/mrc2gif b/bin/X86LINUX64/mrc2gif
index 64d9d0b..6ce4507 100755 (executable)
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diff --git a/bin/X86LINUX64/mrc2mrc b/bin/X86LINUX64/mrc2mrc
index 2dbac3d..704efd8 100755 (executable)
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diff --git a/bin/X86LINUX64/mrc2tiff b/bin/X86LINUX64/mrc2tiff
index 3620d98..143fd5a 100755 (executable)
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diff --git a/bin/X86LINUX64/mrc3DExtractZ b/bin/X86LINUX64/mrc3DExtractZ
index 6413e65..ffe0cf1 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFETnormalizeBySD b/bin/X86LINUX64/mrcFETnormalizeBySD
index 8595e3e..9040cf9 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTCTFCompensation b/bin/X86LINUX64/mrcFFTCTFCompensation
index 8d20384..db72503 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTDigitize b/bin/X86LINUX64/mrcFFTDigitize
index 3232ee8..ad1f30d 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTExpression b/bin/X86LINUX64/mrcFFTExpression
index ee321ec..a20d2a0 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTFibreDiagram b/bin/X86LINUX64/mrcFFTFibreDiagram
index ce571a1..e535ecf 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTFiltering b/bin/X86LINUX64/mrcFFTFiltering
index a4f5aa1..92fee4d 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTIQEstimation b/bin/X86LINUX64/mrcFFTIQEstimation
index 63b3982..2977db2 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTInfo b/bin/X86LINUX64/mrcFFTInfo
index e966179..ac774ec 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTLayerLineCheck b/bin/X86LINUX64/mrcFFTLayerLineCheck
index de36408..5ac6616 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTMedianFilter b/bin/X86LINUX64/mrcFFTMedianFilter
index 4bb9389..bbbc6cc 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTProjection b/bin/X86LINUX64/mrcFFTProjection
index e69f245..0a64c1a 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTResampling b/bin/X86LINUX64/mrcFFTResampling
index 580f440..bf79829 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTShellInfo b/bin/X86LINUX64/mrcFFTShellInfo
index f919411..68a61b3 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTSizeChange b/bin/X86LINUX64/mrcFFTSizeChange
index 0e608f1..d2d8c79 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTSpectrum b/bin/X86LINUX64/mrcFFTSpectrum
index e220456..e24357e 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTXFiltering b/bin/X86LINUX64/mrcFFTXFiltering
index 783ef50..7ead713 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFFTplainreduce b/bin/X86LINUX64/mrcFFTplainreduce
index fe49754..4988f49 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcFTMeridianEquatorRedece b/bin/X86LINUX64/mrcFTMeridianEquatorRedece
index 831a835..60aeff3 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage1DProjectionfrom2D b/bin/X86LINUX64/mrcImage1DProjectionfrom2D
index 653efff..ee4109f 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage1dAverageByCorrelation b/bin/X86LINUX64/mrcImage1dAverageByCorrelation
index 744c703..c9c65eb 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage1dShiftAverageByAnnealing b/bin/X86LINUX64/mrcImage1dShiftAverageByAnnealing
index f227a96..2e1bfe9 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage1dShiftByCorrelation b/bin/X86LINUX64/mrcImage1dShiftByCorrelation
index b8f6703..418ceaa 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage2DBackProjection b/bin/X86LINUX64/mrcImage2DBackProjection
index 664e17e..aeadaf0 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage2DProjection b/bin/X86LINUX64/mrcImage2DProjection
index bec2dcf..4aefe61 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage2pdb b/bin/X86LINUX64/mrcImage2pdb
index 6da46e0..509fafa 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage3DHighResoEmphasis b/bin/X86LINUX64/mrcImage3DHighResoEmphasis
index 4200f6c..68f4e02 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage3DPad b/bin/X86LINUX64/mrcImage3DPad
index b1fe891..c75092b 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage3DPad2 b/bin/X86LINUX64/mrcImage3DPad2
index efcf5a2..d84c5c2 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImage3DWindowing b/bin/X86LINUX64/mrcImage3DWindowing
index 5c9d322..8dac0c5 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAbnormalValueRemove b/bin/X86LINUX64/mrcImageAbnormalValueRemove
index fb56b03..a105a1f 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAdaptiveBinalization b/bin/X86LINUX64/mrcImageAdaptiveBinalization
index 64073cb..5564c8b 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAdd b/bin/X86LINUX64/mrcImageAdd
index 1d4cecd..14ce454 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAreaCalc b/bin/X86LINUX64/mrcImageAreaCalc
index eb75ee0..8489b19 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAsProbability b/bin/X86LINUX64/mrcImageAsProbability
index c5d6ba6..1959b24 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAssignedToTFofPDB b/bin/X86LINUX64/mrcImageAssignedToTFofPDB
index d836693..a6c52bc 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAutoCorrelationWithWindowing b/bin/X86LINUX64/mrcImageAutoCorrelationWithWindowing
index a1bf230..7c1ce1f 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAutoFilamentExtract b/bin/X86LINUX64/mrcImageAutoFilamentExtract
index aa8ec4e..908ea37 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAutoFilamentExtractResultAnalysis b/bin/X86LINUX64/mrcImageAutoFilamentExtractResultAnalysis
index a9d5119..5f28354 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAutoRotationCorrelation b/bin/X86LINUX64/mrcImageAutoRotationCorrelation
index 328a400..1f5acae 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAutoRotationCorrelation3D b/bin/X86LINUX64/mrcImageAutoRotationCorrelation3D
index eb5ce7d..5f93904 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAverage b/bin/X86LINUX64/mrcImageAverage
index 768ba5c..1b9be78 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageBandPassFilter b/bin/X86LINUX64/mrcImageBandPassFilter
index 80efcc5..d4eb70d 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageBilateralFilter b/bin/X86LINUX64/mrcImageBilateralFilter
index 1045de6..00221ac 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageBinalization b/bin/X86LINUX64/mrcImageBinalization
index 8f21343..27f88d0 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageBlockMerge b/bin/X86LINUX64/mrcImageBlockMerge
index 3281b6c..555af6e 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCCDNoiseRemove b/bin/X86LINUX64/mrcImageCCDNoiseRemove
index 36005fe..f990956 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFCompensation b/bin/X86LINUX64/mrcImageCTFCompensation
index a2aec99..835845e 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFCompensationForTiltImage b/bin/X86LINUX64/mrcImageCTFCompensationForTiltImage
index 546c4c7..0a774e4 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFDetermination b/bin/X86LINUX64/mrcImageCTFDetermination
index 868fcf1..372c0d8 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFObservation b/bin/X86LINUX64/mrcImageCTFObservation
index ce88a72..89ed2aa 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFSN b/bin/X86LINUX64/mrcImageCTFSN
index 8810170..100bee5 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCVE b/bin/X86LINUX64/mrcImageCVE
index 39114d6..d1996dd 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCenterDensityChange b/bin/X86LINUX64/mrcImageCenterDensityChange
index fd2b7b7..7d53ade 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCenterGet b/bin/X86LINUX64/mrcImageCenterGet
index 9ac01be..6649ed3 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCenterOfMassCalculate b/bin/X86LINUX64/mrcImageCenterOfMassCalculate
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Binary files a/lib/X86LINUX64/shared/mrcImageOperation.sharedo and b/lib/X86LINUX64/shared/mrcImageOperation.sharedo differ

diff --git a/lib/X86LINUX64/shared/pdbTrans.sharedo b/lib/X86LINUX64/shared/pdbTrans.sharedo
index 0f80ec0..86bb8f6 100755 (executable)
Binary files a/lib/X86LINUX64/shared/pdbTrans.sharedo and b/lib/X86LINUX64/shared/pdbTrans.sharedo differ

diff --git a/lib/X86LINUX64/shared/tkImgFmtMRC.sharedo b/lib/X86LINUX64/shared/tkImgFmtMRC.sharedo
index 80cee9b..cf15354 100644 (file)
Binary files a/lib/X86LINUX64/shared/tkImgFmtMRC.sharedo and b/lib/X86LINUX64/shared/tkImgFmtMRC.sharedo differ

diff --git a/src/Objects/DataExpress/Contour/src/X86LINUX64/libContour.a b/src/Objects/DataExpress/Contour/src/X86LINUX64/libContour.a
index 1fdcd4c..4981eee 100644 (file)
Binary files a/src/Objects/DataExpress/Contour/src/X86LINUX64/libContour.a and b/src/Objects/DataExpress/Contour/src/X86LINUX64/libContour.a differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.a b/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.a
index 8eb9454..bc53a31 100644 (file)
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.a and b/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.a differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.debug.a b/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.debug.a
index 386d778..aee9668 100644 (file)
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.debug.a and b/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.debug.a differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.so b/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.so
index 91eca78..8b017a5 100755 (executable)
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diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.sharedo b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.sharedo
index 80cee9b..cf15354 100644 (file)
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.sharedo and b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.sharedo differ

diff --git a/src/Objects/DataExpress/gifFile/src/X86LINUX64/libgifFile.a b/src/Objects/DataExpress/gifFile/src/X86LINUX64/libgifFile.a
index eda3a27..fac944c 100644 (file)
Binary files a/src/Objects/DataExpress/gifFile/src/X86LINUX64/libgifFile.a and b/src/Objects/DataExpress/gifFile/src/X86LINUX64/libgifFile.a differ

diff --git a/src/Objects/DataExpress/openGL/src/X86LINUX64/libopenGL.a b/src/Objects/DataExpress/openGL/src/X86LINUX64/libopenGL.a
index f19e905..bed32f4 100644 (file)
Binary files a/src/Objects/DataExpress/openGL/src/X86LINUX64/libopenGL.a and b/src/Objects/DataExpress/openGL/src/X86LINUX64/libopenGL.a differ

diff --git a/src/Objects/DataExpress/psFile/src/X86LINUX64/libpsFile.a b/src/Objects/DataExpress/psFile/src/X86LINUX64/libpsFile.a
index 60aef6f..ea5120f 100644 (file)
Binary files a/src/Objects/DataExpress/psFile/src/X86LINUX64/libpsFile.a and b/src/Objects/DataExpress/psFile/src/X86LINUX64/libpsFile.a differ

diff --git a/src/Objects/DataManip/DCDFile/src/X86LINUX64/libDCDFile.a b/src/Objects/DataManip/DCDFile/src/X86LINUX64/libDCDFile.a
index 72ca2de..1f67a95 100644 (file)
Binary files a/src/Objects/DataManip/DCDFile/src/X86LINUX64/libDCDFile.a and b/src/Objects/DataManip/DCDFile/src/X86LINUX64/libDCDFile.a differ

diff --git a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.a b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.a
index f21de0e..3541a9a 100644 (file)
Binary files a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.a and b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.a differ

diff --git a/src/Objects/DataManip/llData/src/X86LINUX64/libllData.a b/src/Objects/DataManip/llData/src/X86LINUX64/libllData.a
index 09cbf77..ba01bc4 100644 (file)
Binary files a/src/Objects/DataManip/llData/src/X86LINUX64/libllData.a and b/src/Objects/DataManip/llData/src/X86LINUX64/libllData.a differ

diff --git a/src/Objects/DataManip/ltlgData/src/X86LINUX64/libltlgData.a b/src/Objects/DataManip/ltlgData/src/X86LINUX64/libltlgData.a
index 2ae216d..34ef55a 100644 (file)
Binary files a/src/Objects/DataManip/ltlgData/src/X86LINUX64/libltlgData.a and b/src/Objects/DataManip/ltlgData/src/X86LINUX64/libltlgData.a differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Depend b/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Depend
index 4e46051..2b957bb 100644 (file)
--- a/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Depend
+++ b/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Depend
@@ -12,6 +12,7 @@ X86LINUX64/lmrcImageAverage.o:lmrcImageAverage.o
 X86LINUX64/lmrcImageBandPassFilter.o:lmrcImageBandPassFilter.o
 X86LINUX64/lmrcImageBilateralFilter.o:lmrcImageBilateralFilter.o
 X86LINUX64/lmrcImageBinarization.o:lmrcImageBinarization.o
+X86LINUX64/lmrcImageBottomHatTransform.o:lmrcImageBottomHatTransform.o
 X86LINUX64/lmrcImageBoundaryInfo.o:lmrcImageBoundaryInfo.o
 X86LINUX64/lmrcImageCTFCompensation.o:lmrcImageCTFCompensation.o
 X86LINUX64/lmrcImageCTFDetermination.o:lmrcImageCTFDetermination.o
@@ -43,6 +44,7 @@ X86LINUX64/lmrcImageDilation.o:lmrcImageDilation.o
 X86LINUX64/lmrcImageDistanceConversion.o:lmrcImageDistanceConversion.o
 X86LINUX64/lmrcImageEdge.o:lmrcImageEdge.o
 X86LINUX64/lmrcImageEdgeAverage.o:lmrcImageEdgeAverage.o
+X86LINUX64/lmrcImageEdgeEnhancement.o:lmrcImageEdgeEnhancement.o
 X86LINUX64/lmrcImageErosion.o:lmrcImageErosion.o
 X86LINUX64/lmrcImageFFT.o:lmrcImageFFT.o
 X86LINUX64/lmrcImageFOMCalc.o:lmrcImageFOMCalc.o
@@ -56,6 +58,7 @@ X86LINUX64/lmrcImageFourierShellCorrelation.o:lmrcImageFourierShellCorrelation.o
 X86LINUX64/lmrcImageHighPassFilter.o:lmrcImageHighPassFilter.o
 X86LINUX64/lmrcImageHighlighting.o:lmrcImageHighlighting.o
 X86LINUX64/lmrcImageLabeling.o:lmrcImageLabeling.o
+X86LINUX64/lmrcImageLogicalOperation.o:lmrcImageLogicalOperation.o
 X86LINUX64/lmrcImageLowPassFilter.o:lmrcImageLowPassFilter.o
 X86LINUX64/lmrcImageMasking.o:lmrcImageMasking.o
 X86LINUX64/lmrcImageMaxDataGet.o:lmrcImageMaxDataGet.o
@@ -74,6 +77,7 @@ X86LINUX64/lmrcImagePad.o:lmrcImagePad.o
 X86LINUX64/lmrcImagePartImageSegmentation.o:lmrcImagePartImageSegmentation.o
 X86LINUX64/lmrcImagePixelSummationOfProbabilityGetByImage.o:lmrcImagePixelSummationOfProbabilityGetByImage.o
 X86LINUX64/lmrcImagePosterization.o:lmrcImagePosterization.o
+X86LINUX64/lmrcImagePrevitt.o:lmrcImagePrevitt.o
 X86LINUX64/lmrcImageProjection.o:lmrcImageProjection.o
 X86LINUX64/lmrcImageProportionalDensityLevelSetByImage.o:lmrcImageProportionalDensityLevelSetByImage.o
 X86LINUX64/lmrcImageROI2D.o:lmrcImageROI2D.o
@@ -81,6 +85,7 @@ X86LINUX64/lmrcImageROI3D.o:lmrcImageROI3D.o
 X86LINUX64/lmrcImageROInotChangeHeaderLength.o:lmrcImageROInotChangeHeaderLength.o
 X86LINUX64/lmrcImageRadialDistribution.o:lmrcImageRadialDistribution.o
 X86LINUX64/lmrcImageRhoFiltering.o:lmrcImageRhoFiltering.o
+X86LINUX64/lmrcImageRoberts.o:lmrcImageRoberts.o
 X86LINUX64/lmrcImageRotation.o:lmrcImageRotation.o
 X86LINUX64/lmrcImageSSDA.o:lmrcImageSSDA.o
 X86LINUX64/lmrcImageSamplingUnitChange.o:lmrcImageSamplingUnitChange.o
@@ -98,6 +103,7 @@ X86LINUX64/lmrcImageSinogram.o:lmrcImageSinogram.o
 X86LINUX64/lmrcImageSinogramCorrelation.o:lmrcImageSinogramCorrelation.o
 X86LINUX64/lmrcImageSinogramFFT.o:lmrcImageSinogramFFT.o
 X86LINUX64/lmrcImageSmoothing.o:lmrcImageSmoothing.o
+X86LINUX64/lmrcImageSobel.o:lmrcImageSobel.o
 X86LINUX64/lmrcImageSolventFlattening.o:lmrcImageSolventFlattening.o
 X86LINUX64/lmrcImageSphere.o:lmrcImageSphere.o
 X86LINUX64/lmrcImageSplit.o:lmrcImageSplit.o
@@ -106,6 +112,7 @@ X86LINUX64/lmrcImageSubtractionCalc.o:lmrcImageSubtractionCalc.o
 X86LINUX64/lmrcImageSummationCalculate.o:lmrcImageSummationCalculate.o
 X86LINUX64/lmrcImageSymmetryFind.o:lmrcImageSymmetryFind.o
 X86LINUX64/lmrcImageTfunction.o:lmrcImageTfunction.o
+X86LINUX64/lmrcImageTopHatTransform.o:lmrcImageTopHatTransform.o
 X86LINUX64/lmrcImageTrans.o:lmrcImageTrans.o
 X86LINUX64/lmrcImageTransformDescartesIntoPolar.o:lmrcImageTransformDescartesIntoPolar.o
 X86LINUX64/lmrcImageTriming.o:lmrcImageTriming.o
@@ -600,6 +607,40 @@ lmrcImageBinarization.o: lmrcImageBinarization.c /usr/include/stdio.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h lmrcImageBinarization.h \
  ../inc/mrcImage.h
+lmrcImageBottomHatTransform.o: lmrcImageBottomHatTransform.c \
+ lmrcImageSubtractionCalc.h ../inc/mrcImage.h /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
+ /usr/include/bits/inf.h /usr/include/bits/nan.h \
+ /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h lmrcImageMorphology.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h
 lmrcImageBoundaryInfo.o: lmrcImageBoundaryInfo.c lmrcImageBoundaryInfo.h
 lmrcImageCTFCompensation.o: lmrcImageCTFCompensation.c \
  /usr/include/stdlib.h /usr/include/features.h /usr/include/sys/cdefs.h \
@@ -1543,6 +1584,40 @@ lmrcImageEdgeAverage.o: lmrcImageEdgeAverage.c \
  /home/people/tacyas/Eos/include/Matrix3D.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h
+lmrcImageEdgeEnhancement.o: lmrcImageEdgeEnhancement.c \
+ /usr/include/stdio.h /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /home/people/tacyas/Eos/include/Memory.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h lmrcImageEdgeEnhancement.h \
+ ../inc/mrcImage.h /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
+ /usr/include/bits/inf.h /usr/include/bits/nan.h \
+ /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h
 lmrcImageErosion.o: lmrcImageErosion.c \
  /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
  /usr/include/features.h /usr/include/sys/cdefs.h \
@@ -1615,8 +1690,7 @@ lmrcImageFFT.o: lmrcImageFFT.c /home/people/tacyas/Eos/include/genUtil.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Matrix3D.h \
  /home/people/tacyas/Eos/include/Vector.h \
- /home/people/tacyas/Eos/include/Array.h \
- /home/people/tacyas/Eos/util/X86LINUX64/cuda/include/cuda.h fftn.h
+ /home/people/tacyas/Eos/include/Array.h fftn.h
 lmrcImageFOMCalc.o: lmrcImageFOMCalc.c \
  /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
  /usr/include/features.h /usr/include/sys/cdefs.h \
@@ -1987,6 +2061,39 @@ lmrcImageLabeling.o: lmrcImageLabeling.c \
  /home/people/tacyas/Eos/include/Matrix3D.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h
+lmrcImageLogicalOperation.o: lmrcImageLogicalOperation.c \
+ /usr/include/stdio.h /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h lmrcImageLogic.h \
+ ../inc/mrcImage.h /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
+ /usr/include/bits/inf.h /usr/include/bits/nan.h \
+ /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h
 lmrcImageLowPassFilter.o: lmrcImageLowPassFilter.c /usr/include/stdio.h \
  /usr/include/features.h /usr/include/sys/cdefs.h \
  /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
@@ -2570,6 +2677,39 @@ lmrcImagePosterization.o: lmrcImagePosterization.c \
  /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
  /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
  /home/people/tacyas/Eos/include/Memory.h ../inc/mrcImage.h
+lmrcImagePrevitt.o: lmrcImagePrevitt.c /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ lmrcImageEdgeEnhancement.h ../inc/mrcImage.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h /home/people/tacyas/Eos/include/genUtil.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h
 lmrcImageProjection.o: lmrcImageProjection.c lmrcImageProjection.h \
  /usr/include/stdio.h /usr/include/features.h /usr/include/sys/cdefs.h \
  /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
@@ -2796,6 +2936,40 @@ lmrcImageRhoFiltering.o: lmrcImageRhoFiltering.c /usr/include/math.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h lmrcImageRhoFiltering.h \
  ../inc/mrcImage.h
+lmrcImageRoberts.o: lmrcImageRoberts.c \
+ /home/people/tacyas/Eos/include/Memory.h /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h /usr/include/stdlib.h \
+ /usr/include/bits/waitflags.h /usr/include/bits/waitstatus.h \
+ /usr/include/endian.h /usr/include/bits/endian.h \
+ /usr/include/bits/byteswap.h /usr/include/sys/types.h \
+ /usr/include/time.h /usr/include/sys/select.h /usr/include/bits/select.h \
+ /usr/include/bits/sigset.h /usr/include/bits/time.h \
+ /usr/include/sys/sysmacros.h /usr/include/bits/pthreadtypes.h \
+ /usr/include/alloca.h lmrcImageEdgeEnhancement.h ../inc/mrcImage.h \
+ /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
+ /usr/include/bits/inf.h /usr/include/bits/nan.h \
+ /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h
 lmrcImageRotation.o: lmrcImageRotation.c /usr/include/math.h \
  /usr/include/features.h /usr/include/sys/cdefs.h \
  /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
@@ -3327,6 +3501,39 @@ lmrcImageSmoothing.o: lmrcImageSmoothing.c /usr/include/stdio.h \
  /home/people/tacyas/Eos/include/Matrix3D.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h
+lmrcImageSobel.o: lmrcImageSobel.c /usr/include/stdlib.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/waitflags.h /usr/include/bits/waitstatus.h \
+ /usr/include/endian.h /usr/include/bits/endian.h \
+ /usr/include/bits/byteswap.h /usr/include/sys/types.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/time.h /usr/include/sys/select.h /usr/include/bits/select.h \
+ /usr/include/bits/sigset.h /usr/include/bits/time.h \
+ /usr/include/sys/sysmacros.h /usr/include/bits/pthreadtypes.h \
+ /usr/include/alloca.h lmrcImageEdgeEnhancement.h /usr/include/stdio.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ ../inc/mrcImage.h /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
+ /usr/include/bits/inf.h /usr/include/bits/nan.h \
+ /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h
 lmrcImageSolventFlattening.o: lmrcImageSolventFlattening.c \
  ../inc/mrcImage.h /usr/include/stdio.h /usr/include/features.h \
  /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
@@ -3580,6 +3787,40 @@ lmrcImageTfunction.o: lmrcImageTfunction.c /usr/include/stdio.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h \
  /home/people/tacyas/Eos/include/Memory.h
+lmrcImageTopHatTransform.o: lmrcImageTopHatTransform.c \
+ lmrcImageSubtractionCalc.h ../inc/mrcImage.h /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
+ /usr/include/bits/inf.h /usr/include/bits/nan.h \
+ /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h lmrcImageMorphology.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h
 lmrcImageTrans.o: lmrcImageTrans.c ../inc/mrcImage.h /usr/include/stdio.h \
  /usr/include/features.h /usr/include/sys/cdefs.h \
  /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Source b/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Source
index 376274d..422f61c 100644 (file)
--- a/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Source
+++ b/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Source
@@ -13,6 +13,7 @@ lmrcImageAverage.c \
 lmrcImageBandPassFilter.c \
 lmrcImageBilateralFilter.c \
 lmrcImageBinarization.c \
+lmrcImageBottomHatTransform.c \
 lmrcImageBoundaryInfo.c \
 lmrcImageCTFCompensation.c \
 lmrcImageCTFDetermination.c \
@@ -44,6 +45,7 @@ lmrcImageDilation.c \
 lmrcImageDistanceConversion.c \
 lmrcImageEdge.c \
 lmrcImageEdgeAverage.c \
+lmrcImageEdgeEnhancement.c \
 lmrcImageErosion.c \
 lmrcImageFFT.c \
 lmrcImageFOMCalc.c \
@@ -57,6 +59,7 @@ lmrcImageFourierShellCorrelation.c \
 lmrcImageHighPassFilter.c \
 lmrcImageHighlighting.c \
 lmrcImageLabeling.c \
+lmrcImageLogicalOperation.c \
 lmrcImageLowPassFilter.c \
 lmrcImageMasking.c \
 lmrcImageMaxDataGet.c \
@@ -75,6 +78,7 @@ lmrcImagePad.c \
 lmrcImagePartImageSegmentation.c \
 lmrcImagePixelSummationOfProbabilityGetByImage.c \
 lmrcImagePosterization.c \
+lmrcImagePrevitt.c \
 lmrcImageProjection.c \
 lmrcImageProportionalDensityLevelSetByImage.c \
 lmrcImageROI2D.c \
@@ -82,6 +86,7 @@ lmrcImageROI3D.c \
 lmrcImageROInotChangeHeaderLength.c \
 lmrcImageRadialDistribution.c \
 lmrcImageRhoFiltering.c \
+lmrcImageRoberts.c \
 lmrcImageRotation.c \
 lmrcImageSSDA.c \
 lmrcImageSamplingUnitChange.c \
@@ -99,6 +104,7 @@ lmrcImageSinogram.c \
 lmrcImageSinogramCorrelation.c \
 lmrcImageSinogramFFT.c \
 lmrcImageSmoothing.c \
+lmrcImageSobel.c \
 lmrcImageSolventFlattening.c \
 lmrcImageSphere.c \
 lmrcImageSplit.c \
@@ -107,6 +113,7 @@ lmrcImageSubtractionCalc.c \
 lmrcImageSummationCalculate.c \
 lmrcImageSymmetryFind.c \
 lmrcImageTfunction.c \
+lmrcImageTopHatTransform.c \
 lmrcImageTrans.c \
 lmrcImageTransformDescartesIntoPolar.c \
 lmrcImageTriming.c \
@@ -165,6 +172,7 @@ lmrcImageAverage.o \
 lmrcImageBandPassFilter.o \
 lmrcImageBilateralFilter.o \
 lmrcImageBinarization.o \
+lmrcImageBottomHatTransform.o \
 lmrcImageBoundaryInfo.o \
 lmrcImageCTFCompensation.o \
 lmrcImageCTFDetermination.o \
@@ -196,6 +204,7 @@ lmrcImageDilation.o \
 lmrcImageDistanceConversion.o \
 lmrcImageEdge.o \
 lmrcImageEdgeAverage.o \
+lmrcImageEdgeEnhancement.o \
 lmrcImageErosion.o \
 lmrcImageFFT.o \
 lmrcImageFOMCalc.o \
@@ -209,6 +218,7 @@ lmrcImageFourierShellCorrelation.o \
 lmrcImageHighPassFilter.o \
 lmrcImageHighlighting.o \
 lmrcImageLabeling.o \
+lmrcImageLogicalOperation.o \
 lmrcImageLowPassFilter.o \
 lmrcImageMasking.o \
 lmrcImageMaxDataGet.o \
@@ -227,6 +237,7 @@ lmrcImagePad.o \
 lmrcImagePartImageSegmentation.o \
 lmrcImagePixelSummationOfProbabilityGetByImage.o \
 lmrcImagePosterization.o \
+lmrcImagePrevitt.o \
 lmrcImageProjection.o \
 lmrcImageProportionalDensityLevelSetByImage.o \
 lmrcImageROI2D.o \
@@ -234,6 +245,7 @@ lmrcImageROI3D.o \
 lmrcImageROInotChangeHeaderLength.o \
 lmrcImageRadialDistribution.o \
 lmrcImageRhoFiltering.o \
+lmrcImageRoberts.o \
 lmrcImageRotation.o \
 lmrcImageSSDA.o \
 lmrcImageSamplingUnitChange.o \
@@ -251,6 +263,7 @@ lmrcImageSinogram.o \
 lmrcImageSinogramCorrelation.o \
 lmrcImageSinogramFFT.o \
 lmrcImageSmoothing.o \
+lmrcImageSobel.o \
 lmrcImageSolventFlattening.o \
 lmrcImageSphere.o \
 lmrcImageSplit.o \
@@ -259,6 +272,7 @@ lmrcImageSubtractionCalc.o \
 lmrcImageSummationCalculate.o \
 lmrcImageSymmetryFind.o \
 lmrcImageTfunction.o \
+lmrcImageTopHatTransform.o \
 lmrcImageTrans.o \
 lmrcImageTransformDescartesIntoPolar.o \
 lmrcImageTriming.o \
@@ -317,6 +331,7 @@ lmrcImageAverage.sharedo \
 lmrcImageBandPassFilter.sharedo \
 lmrcImageBilateralFilter.sharedo \
 lmrcImageBinarization.sharedo \
+lmrcImageBottomHatTransform.sharedo \
 lmrcImageBoundaryInfo.sharedo \
 lmrcImageCTFCompensation.sharedo \
 lmrcImageCTFDetermination.sharedo \
@@ -348,6 +363,7 @@ lmrcImageDilation.sharedo \
 lmrcImageDistanceConversion.sharedo \
 lmrcImageEdge.sharedo \
 lmrcImageEdgeAverage.sharedo \
+lmrcImageEdgeEnhancement.sharedo \
 lmrcImageErosion.sharedo \
 lmrcImageFFT.sharedo \
 lmrcImageFOMCalc.sharedo \
@@ -361,6 +377,7 @@ lmrcImageFourierShellCorrelation.sharedo \
 lmrcImageHighPassFilter.sharedo \
 lmrcImageHighlighting.sharedo \
 lmrcImageLabeling.sharedo \
+lmrcImageLogicalOperation.sharedo \
 lmrcImageLowPassFilter.sharedo \
 lmrcImageMasking.sharedo \
 lmrcImageMaxDataGet.sharedo \
@@ -379,6 +396,7 @@ lmrcImagePad.sharedo \
 lmrcImagePartImageSegmentation.sharedo \
 lmrcImagePixelSummationOfProbabilityGetByImage.sharedo \
 lmrcImagePosterization.sharedo \
+lmrcImagePrevitt.sharedo \
 lmrcImageProjection.sharedo \
 lmrcImageProportionalDensityLevelSetByImage.sharedo \
 lmrcImageROI2D.sharedo \
@@ -386,6 +404,7 @@ lmrcImageROI3D.sharedo \
 lmrcImageROInotChangeHeaderLength.sharedo \
 lmrcImageRadialDistribution.sharedo \
 lmrcImageRhoFiltering.sharedo \
+lmrcImageRoberts.sharedo \
 lmrcImageRotation.sharedo \
 lmrcImageSSDA.sharedo \
 lmrcImageSamplingUnitChange.sharedo \
@@ -403,6 +422,7 @@ lmrcImageSinogram.sharedo \
 lmrcImageSinogramCorrelation.sharedo \
 lmrcImageSinogramFFT.sharedo \
 lmrcImageSmoothing.sharedo \
+lmrcImageSobel.sharedo \
 lmrcImageSolventFlattening.sharedo \
 lmrcImageSphere.sharedo \
 lmrcImageSplit.sharedo \
@@ -411,6 +431,7 @@ lmrcImageSubtractionCalc.sharedo \
 lmrcImageSummationCalculate.sharedo \
 lmrcImageSymmetryFind.sharedo \
 lmrcImageTfunction.sharedo \
+lmrcImageTopHatTransform.sharedo \
 lmrcImageTrans.sharedo \
 lmrcImageTransformDescartesIntoPolar.sharedo \
 lmrcImageTriming.sharedo \
@@ -469,6 +490,7 @@ X86LINUX64/lmrcImageAverage.o \
 X86LINUX64/lmrcImageBandPassFilter.o \
 X86LINUX64/lmrcImageBilateralFilter.o \
 X86LINUX64/lmrcImageBinarization.o \
+X86LINUX64/lmrcImageBottomHatTransform.o \
 X86LINUX64/lmrcImageBoundaryInfo.o \
 X86LINUX64/lmrcImageCTFCompensation.o \
 X86LINUX64/lmrcImageCTFDetermination.o \
@@ -500,6 +522,7 @@ X86LINUX64/lmrcImageDilation.o \
 X86LINUX64/lmrcImageDistanceConversion.o \
 X86LINUX64/lmrcImageEdge.o \
 X86LINUX64/lmrcImageEdgeAverage.o \
+X86LINUX64/lmrcImageEdgeEnhancement.o \
 X86LINUX64/lmrcImageErosion.o \
 X86LINUX64/lmrcImageFFT.o \
 X86LINUX64/lmrcImageFOMCalc.o \
@@ -513,6 +536,7 @@ X86LINUX64/lmrcImageFourierShellCorrelation.o \
 X86LINUX64/lmrcImageHighPassFilter.o \
 X86LINUX64/lmrcImageHighlighting.o \
 X86LINUX64/lmrcImageLabeling.o \
+X86LINUX64/lmrcImageLogicalOperation.o \
 X86LINUX64/lmrcImageLowPassFilter.o \
 X86LINUX64/lmrcImageMasking.o \
 X86LINUX64/lmrcImageMaxDataGet.o \
@@ -531,6 +555,7 @@ X86LINUX64/lmrcImagePad.o \
 X86LINUX64/lmrcImagePartImageSegmentation.o \
 X86LINUX64/lmrcImagePixelSummationOfProbabilityGetByImage.o \
 X86LINUX64/lmrcImagePosterization.o \
+X86LINUX64/lmrcImagePrevitt.o \
 X86LINUX64/lmrcImageProjection.o \
 X86LINUX64/lmrcImageProportionalDensityLevelSetByImage.o \
 X86LINUX64/lmrcImageROI2D.o \
@@ -538,6 +563,7 @@ X86LINUX64/lmrcImageROI3D.o \
 X86LINUX64/lmrcImageROInotChangeHeaderLength.o \
 X86LINUX64/lmrcImageRadialDistribution.o \
 X86LINUX64/lmrcImageRhoFiltering.o \
+X86LINUX64/lmrcImageRoberts.o \
 X86LINUX64/lmrcImageRotation.o \
 X86LINUX64/lmrcImageSSDA.o \
 X86LINUX64/lmrcImageSamplingUnitChange.o \
@@ -555,6 +581,7 @@ X86LINUX64/lmrcImageSinogram.o \
 X86LINUX64/lmrcImageSinogramCorrelation.o \
 X86LINUX64/lmrcImageSinogramFFT.o \
 X86LINUX64/lmrcImageSmoothing.o \
+X86LINUX64/lmrcImageSobel.o \
 X86LINUX64/lmrcImageSolventFlattening.o \
 X86LINUX64/lmrcImageSphere.o \
 X86LINUX64/lmrcImageSplit.o \
@@ -563,6 +590,7 @@ X86LINUX64/lmrcImageSubtractionCalc.o \
 X86LINUX64/lmrcImageSummationCalculate.o \
 X86LINUX64/lmrcImageSymmetryFind.o \
 X86LINUX64/lmrcImageTfunction.o \
+X86LINUX64/lmrcImageTopHatTransform.o \
 X86LINUX64/lmrcImageTrans.o \
 X86LINUX64/lmrcImageTransformDescartesIntoPolar.o \
 X86LINUX64/lmrcImageTriming.o \
@@ -621,6 +649,7 @@ X86LINUX64/lmrcImageAverage.sharedo \
 X86LINUX64/lmrcImageBandPassFilter.sharedo \
 X86LINUX64/lmrcImageBilateralFilter.sharedo \
 X86LINUX64/lmrcImageBinarization.sharedo \
+X86LINUX64/lmrcImageBottomHatTransform.sharedo \
 X86LINUX64/lmrcImageBoundaryInfo.sharedo \
 X86LINUX64/lmrcImageCTFCompensation.sharedo \
 X86LINUX64/lmrcImageCTFDetermination.sharedo \
@@ -652,6 +681,7 @@ X86LINUX64/lmrcImageDilation.sharedo \
 X86LINUX64/lmrcImageDistanceConversion.sharedo \
 X86LINUX64/lmrcImageEdge.sharedo \
 X86LINUX64/lmrcImageEdgeAverage.sharedo \
+X86LINUX64/lmrcImageEdgeEnhancement.sharedo \
 X86LINUX64/lmrcImageErosion.sharedo \
 X86LINUX64/lmrcImageFFT.sharedo \
 X86LINUX64/lmrcImageFOMCalc.sharedo \
@@ -665,6 +695,7 @@ X86LINUX64/lmrcImageFourierShellCorrelation.sharedo \
 X86LINUX64/lmrcImageHighPassFilter.sharedo \
 X86LINUX64/lmrcImageHighlighting.sharedo \
 X86LINUX64/lmrcImageLabeling.sharedo \
+X86LINUX64/lmrcImageLogicalOperation.sharedo \
 X86LINUX64/lmrcImageLowPassFilter.sharedo \
 X86LINUX64/lmrcImageMasking.sharedo \
 X86LINUX64/lmrcImageMaxDataGet.sharedo \
@@ -683,6 +714,7 @@ X86LINUX64/lmrcImagePad.sharedo \
 X86LINUX64/lmrcImagePartImageSegmentation.sharedo \
 X86LINUX64/lmrcImagePixelSummationOfProbabilityGetByImage.sharedo \
 X86LINUX64/lmrcImagePosterization.sharedo \
+X86LINUX64/lmrcImagePrevitt.sharedo \
 X86LINUX64/lmrcImageProjection.sharedo \
 X86LINUX64/lmrcImageProportionalDensityLevelSetByImage.sharedo \
 X86LINUX64/lmrcImageROI2D.sharedo \
@@ -690,6 +722,7 @@ X86LINUX64/lmrcImageROI3D.sharedo \
 X86LINUX64/lmrcImageROInotChangeHeaderLength.sharedo \
 X86LINUX64/lmrcImageRadialDistribution.sharedo \
 X86LINUX64/lmrcImageRhoFiltering.sharedo \
+X86LINUX64/lmrcImageRoberts.sharedo \
 X86LINUX64/lmrcImageRotation.sharedo \
 X86LINUX64/lmrcImageSSDA.sharedo \
 X86LINUX64/lmrcImageSamplingUnitChange.sharedo \
@@ -707,6 +740,7 @@ X86LINUX64/lmrcImageSinogram.sharedo \
 X86LINUX64/lmrcImageSinogramCorrelation.sharedo \
 X86LINUX64/lmrcImageSinogramFFT.sharedo \
 X86LINUX64/lmrcImageSmoothing.sharedo \
+X86LINUX64/lmrcImageSobel.sharedo \
 X86LINUX64/lmrcImageSolventFlattening.sharedo \
 X86LINUX64/lmrcImageSphere.sharedo \
 X86LINUX64/lmrcImageSplit.sharedo \
@@ -715,6 +749,7 @@ X86LINUX64/lmrcImageSubtractionCalc.sharedo \
 X86LINUX64/lmrcImageSummationCalculate.sharedo \
 X86LINUX64/lmrcImageSymmetryFind.sharedo \
 X86LINUX64/lmrcImageTfunction.sharedo \
+X86LINUX64/lmrcImageTopHatTransform.sharedo \
 X86LINUX64/lmrcImageTrans.sharedo \
 X86LINUX64/lmrcImageTransformDescartesIntoPolar.sharedo \
 X86LINUX64/lmrcImageTriming.sharedo \
@@ -773,6 +808,7 @@ lmrcImageAverage.debugo \
 lmrcImageBandPassFilter.debugo \
 lmrcImageBilateralFilter.debugo \
 lmrcImageBinarization.debugo \
+lmrcImageBottomHatTransform.debugo \
 lmrcImageBoundaryInfo.debugo \
 lmrcImageCTFCompensation.debugo \
 lmrcImageCTFDetermination.debugo \
@@ -804,6 +840,7 @@ lmrcImageDilation.debugo \
 lmrcImageDistanceConversion.debugo \
 lmrcImageEdge.debugo \
 lmrcImageEdgeAverage.debugo \
+lmrcImageEdgeEnhancement.debugo \
 lmrcImageErosion.debugo \
 lmrcImageFFT.debugo \
 lmrcImageFOMCalc.debugo \
@@ -817,6 +854,7 @@ lmrcImageFourierShellCorrelation.debugo \
 lmrcImageHighPassFilter.debugo \
 lmrcImageHighlighting.debugo \
 lmrcImageLabeling.debugo \
+lmrcImageLogicalOperation.debugo \
 lmrcImageLowPassFilter.debugo \
 lmrcImageMasking.debugo \
 lmrcImageMaxDataGet.debugo \
@@ -835,6 +873,7 @@ lmrcImagePad.debugo \
 lmrcImagePartImageSegmentation.debugo \
 lmrcImagePixelSummationOfProbabilityGetByImage.debugo \
 lmrcImagePosterization.debugo \
+lmrcImagePrevitt.debugo \
 lmrcImageProjection.debugo \
 lmrcImageProportionalDensityLevelSetByImage.debugo \
 lmrcImageROI2D.debugo \
@@ -842,6 +881,7 @@ lmrcImageROI3D.debugo \
 lmrcImageROInotChangeHeaderLength.debugo \
 lmrcImageRadialDistribution.debugo \
 lmrcImageRhoFiltering.debugo \
+lmrcImageRoberts.debugo \
 lmrcImageRotation.debugo \
 lmrcImageSSDA.debugo \
 lmrcImageSamplingUnitChange.debugo \
@@ -859,6 +899,7 @@ lmrcImageSinogram.debugo \
 lmrcImageSinogramCorrelation.debugo \
 lmrcImageSinogramFFT.debugo \
 lmrcImageSmoothing.debugo \
+lmrcImageSobel.debugo \
 lmrcImageSolventFlattening.debugo \
 lmrcImageSphere.debugo \
 lmrcImageSplit.debugo \
@@ -867,6 +908,7 @@ lmrcImageSubtractionCalc.debugo \
 lmrcImageSummationCalculate.debugo \
 lmrcImageSymmetryFind.debugo \
 lmrcImageTfunction.debugo \
+lmrcImageTopHatTransform.debugo \
 lmrcImageTrans.debugo \
 lmrcImageTransformDescartesIntoPolar.debugo \
 lmrcImageTriming.debugo \
@@ -923,6 +965,7 @@ X86LINUX64/lmrcImageAverage.debugo \
 X86LINUX64/lmrcImageBandPassFilter.debugo \
 X86LINUX64/lmrcImageBilateralFilter.debugo \
 X86LINUX64/lmrcImageBinarization.debugo \
+X86LINUX64/lmrcImageBottomHatTransform.debugo \
 X86LINUX64/lmrcImageBoundaryInfo.debugo \
 X86LINUX64/lmrcImageCTFCompensation.debugo \
 X86LINUX64/lmrcImageCTFDetermination.debugo \
@@ -954,6 +997,7 @@ X86LINUX64/lmrcImageDilation.debugo \
 X86LINUX64/lmrcImageDistanceConversion.debugo \
 X86LINUX64/lmrcImageEdge.debugo \
 X86LINUX64/lmrcImageEdgeAverage.debugo \
+X86LINUX64/lmrcImageEdgeEnhancement.debugo \
 X86LINUX64/lmrcImageErosion.debugo \
 X86LINUX64/lmrcImageFFT.debugo \
 X86LINUX64/lmrcImageFOMCalc.debugo \
@@ -967,6 +1011,7 @@ X86LINUX64/lmrcImageFourierShellCorrelation.debugo \
 X86LINUX64/lmrcImageHighPassFilter.debugo \
 X86LINUX64/lmrcImageHighlighting.debugo \
 X86LINUX64/lmrcImageLabeling.debugo \
+X86LINUX64/lmrcImageLogicalOperation.debugo \
 X86LINUX64/lmrcImageLowPassFilter.debugo \
 X86LINUX64/lmrcImageMasking.debugo \
 X86LINUX64/lmrcImageMaxDataGet.debugo \
@@ -985,6 +1030,7 @@ X86LINUX64/lmrcImagePad.debugo \
 X86LINUX64/lmrcImagePartImageSegmentation.debugo \
 X86LINUX64/lmrcImagePixelSummationOfProbabilityGetByImage.debugo \
 X86LINUX64/lmrcImagePosterization.debugo \
+X86LINUX64/lmrcImagePrevitt.debugo \
 X86LINUX64/lmrcImageProjection.debugo \
 X86LINUX64/lmrcImageProportionalDensityLevelSetByImage.debugo \
 X86LINUX64/lmrcImageROI2D.debugo \
@@ -992,6 +1038,7 @@ X86LINUX64/lmrcImageROI3D.debugo \
 X86LINUX64/lmrcImageROInotChangeHeaderLength.debugo \
 X86LINUX64/lmrcImageRadialDistribution.debugo \
 X86LINUX64/lmrcImageRhoFiltering.debugo \
+X86LINUX64/lmrcImageRoberts.debugo \
 X86LINUX64/lmrcImageRotation.debugo \
 X86LINUX64/lmrcImageSSDA.debugo \
 X86LINUX64/lmrcImageSamplingUnitChange.debugo \
@@ -1009,6 +1056,7 @@ X86LINUX64/lmrcImageSinogram.debugo \
 X86LINUX64/lmrcImageSinogramCorrelation.debugo \
 X86LINUX64/lmrcImageSinogramFFT.debugo \
 X86LINUX64/lmrcImageSmoothing.debugo \
+X86LINUX64/lmrcImageSobel.debugo \
 X86LINUX64/lmrcImageSolventFlattening.debugo \
 X86LINUX64/lmrcImageSphere.debugo \
 X86LINUX64/lmrcImageSplit.debugo \
@@ -1017,6 +1065,7 @@ X86LINUX64/lmrcImageSubtractionCalc.debugo \
 X86LINUX64/lmrcImageSummationCalculate.debugo \
 X86LINUX64/lmrcImageSymmetryFind.debugo \
 X86LINUX64/lmrcImageTfunction.debugo \
+X86LINUX64/lmrcImageTopHatTransform.debugo \
 X86LINUX64/lmrcImageTrans.debugo \
 X86LINUX64/lmrcImageTransformDescartesIntoPolar.debugo \
 X86LINUX64/lmrcImageTriming.debugo \
@@ -1075,6 +1124,7 @@ lmrcImageAverage.cudagdb.o \
 lmrcImageBandPassFilter.cudagdb.o \
 lmrcImageBilateralFilter.cudagdb.o \
 lmrcImageBinarization.cudagdb.o \
+lmrcImageBottomHatTransform.cudagdb.o \
 lmrcImageBoundaryInfo.cudagdb.o \
 lmrcImageCTFCompensation.cudagdb.o \
 lmrcImageCTFDetermination.cudagdb.o \
@@ -1106,6 +1156,7 @@ lmrcImageDilation.cudagdb.o \
 lmrcImageDistanceConversion.cudagdb.o \
 lmrcImageEdge.cudagdb.o \
 lmrcImageEdgeAverage.cudagdb.o \
+lmrcImageEdgeEnhancement.cudagdb.o \
 lmrcImageErosion.cudagdb.o \
 lmrcImageFFT.cudagdb.o \
 lmrcImageFOMCalc.cudagdb.o \
@@ -1119,6 +1170,7 @@ lmrcImageFourierShellCorrelation.cudagdb.o \
 lmrcImageHighPassFilter.cudagdb.o \
 lmrcImageHighlighting.cudagdb.o \
 lmrcImageLabeling.cudagdb.o \
+lmrcImageLogicalOperation.cudagdb.o \
 lmrcImageLowPassFilter.cudagdb.o \
 lmrcImageMasking.cudagdb.o \
 lmrcImageMaxDataGet.cudagdb.o \
@@ -1137,6 +1189,7 @@ lmrcImagePad.cudagdb.o \
 lmrcImagePartImageSegmentation.cudagdb.o \
 lmrcImagePixelSummationOfProbabilityGetByImage.cudagdb.o \
 lmrcImagePosterization.cudagdb.o \
+lmrcImagePrevitt.cudagdb.o \
 lmrcImageProjection.cudagdb.o \
 lmrcImageProportionalDensityLevelSetByImage.cudagdb.o \
 lmrcImageROI2D.cudagdb.o \
@@ -1144,6 +1197,7 @@ lmrcImageROI3D.cudagdb.o \
 lmrcImageROInotChangeHeaderLength.cudagdb.o \
 lmrcImageRadialDistribution.cudagdb.o \
 lmrcImageRhoFiltering.cudagdb.o \
+lmrcImageRoberts.cudagdb.o \
 lmrcImageRotation.cudagdb.o \
 lmrcImageSSDA.cudagdb.o \
 lmrcImageSamplingUnitChange.cudagdb.o \
@@ -1161,6 +1215,7 @@ lmrcImageSinogram.cudagdb.o \
 lmrcImageSinogramCorrelation.cudagdb.o \
 lmrcImageSinogramFFT.cudagdb.o \
 lmrcImageSmoothing.cudagdb.o \
+lmrcImageSobel.cudagdb.o \
 lmrcImageSolventFlattening.cudagdb.o \
 lmrcImageSphere.cudagdb.o \
 lmrcImageSplit.cudagdb.o \
@@ -1169,6 +1224,7 @@ lmrcImageSubtractionCalc.cudagdb.o \
 lmrcImageSummationCalculate.cudagdb.o \
 lmrcImageSymmetryFind.cudagdb.o \
 lmrcImageTfunction.cudagdb.o \
+lmrcImageTopHatTransform.cudagdb.o \
 lmrcImageTrans.cudagdb.o \
 lmrcImageTransformDescartesIntoPolar.cudagdb.o \
 lmrcImageTriming.cudagdb.o \
@@ -1227,6 +1283,7 @@ X86LINUX64/lmrcImageAverage.cudagdb.o \
 X86LINUX64/lmrcImageBandPassFilter.cudagdb.o \
 X86LINUX64/lmrcImageBilateralFilter.cudagdb.o \
 X86LINUX64/lmrcImageBinarization.cudagdb.o \
+X86LINUX64/lmrcImageBottomHatTransform.cudagdb.o \
 X86LINUX64/lmrcImageBoundaryInfo.cudagdb.o \
 X86LINUX64/lmrcImageCTFCompensation.cudagdb.o \
 X86LINUX64/lmrcImageCTFDetermination.cudagdb.o \
@@ -1258,6 +1315,7 @@ X86LINUX64/lmrcImageDilation.cudagdb.o \
 X86LINUX64/lmrcImageDistanceConversion.cudagdb.o \
 X86LINUX64/lmrcImageEdge.cudagdb.o \
 X86LINUX64/lmrcImageEdgeAverage.cudagdb.o \
+X86LINUX64/lmrcImageEdgeEnhancement.cudagdb.o \
 X86LINUX64/lmrcImageErosion.cudagdb.o \
 X86LINUX64/lmrcImageFFT.cudagdb.o \
 X86LINUX64/lmrcImageFOMCalc.cudagdb.o \
@@ -1271,6 +1329,7 @@ X86LINUX64/lmrcImageFourierShellCorrelation.cudagdb.o \
 X86LINUX64/lmrcImageHighPassFilter.cudagdb.o \
 X86LINUX64/lmrcImageHighlighting.cudagdb.o \
 X86LINUX64/lmrcImageLabeling.cudagdb.o \
+X86LINUX64/lmrcImageLogicalOperation.cudagdb.o \
 X86LINUX64/lmrcImageLowPassFilter.cudagdb.o \
 X86LINUX64/lmrcImageMasking.cudagdb.o \
 X86LINUX64/lmrcImageMaxDataGet.cudagdb.o \
@@ -1289,6 +1348,7 @@ X86LINUX64/lmrcImagePad.cudagdb.o \
 X86LINUX64/lmrcImagePartImageSegmentation.cudagdb.o \
 X86LINUX64/lmrcImagePixelSummationOfProbabilityGetByImage.cudagdb.o \
 X86LINUX64/lmrcImagePosterization.cudagdb.o \
+X86LINUX64/lmrcImagePrevitt.cudagdb.o \
 X86LINUX64/lmrcImageProjection.cudagdb.o \
 X86LINUX64/lmrcImageProportionalDensityLevelSetByImage.cudagdb.o \
 X86LINUX64/lmrcImageROI2D.cudagdb.o \
@@ -1296,6 +1356,7 @@ X86LINUX64/lmrcImageROI3D.cudagdb.o \
 X86LINUX64/lmrcImageROInotChangeHeaderLength.cudagdb.o \
 X86LINUX64/lmrcImageRadialDistribution.cudagdb.o \
 X86LINUX64/lmrcImageRhoFiltering.cudagdb.o \
+X86LINUX64/lmrcImageRoberts.cudagdb.o \
 X86LINUX64/lmrcImageRotation.cudagdb.o \
 X86LINUX64/lmrcImageSSDA.cudagdb.o \
 X86LINUX64/lmrcImageSamplingUnitChange.cudagdb.o \
@@ -1313,6 +1374,7 @@ X86LINUX64/lmrcImageSinogram.cudagdb.o \
 X86LINUX64/lmrcImageSinogramCorrelation.cudagdb.o \
 X86LINUX64/lmrcImageSinogramFFT.cudagdb.o \
 X86LINUX64/lmrcImageSmoothing.cudagdb.o \
+X86LINUX64/lmrcImageSobel.cudagdb.o \
 X86LINUX64/lmrcImageSolventFlattening.cudagdb.o \
 X86LINUX64/lmrcImageSphere.cudagdb.o \
 X86LINUX64/lmrcImageSplit.cudagdb.o \
@@ -1321,6 +1383,7 @@ X86LINUX64/lmrcImageSubtractionCalc.cudagdb.o \
 X86LINUX64/lmrcImageSummationCalculate.cudagdb.o \
 X86LINUX64/lmrcImageSymmetryFind.cudagdb.o \
 X86LINUX64/lmrcImageTfunction.cudagdb.o \
+X86LINUX64/lmrcImageTopHatTransform.cudagdb.o \
 X86LINUX64/lmrcImageTrans.cudagdb.o \
 X86LINUX64/lmrcImageTransformDescartesIntoPolar.cudagdb.o \
 X86LINUX64/lmrcImageTriming.cudagdb.o \

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.a b/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.a
index 824a8f3..c6c37c5 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.a and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.a differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.debug.a b/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.debug.a
index 2b9fbaf..8c9664c 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.debug.a and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.debug.a differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageAddValue.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageAddValue.sharedo
index 2e65591..f626193 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageAddValue.sharedo and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageAddValue.sharedo differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageAverage.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageAverage.sharedo
index 0c5f0fa..5911ed1 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageAverage.sharedo and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageAverage.sharedo differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageBottomHatTransform.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageBottomHatTransform.sharedo
new file mode 100644 (file)
index 0000000..ff48305
Binary files /dev/null and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageBottomHatTransform.sharedo differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageEdgeEnhancement.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageEdgeEnhancement.sharedo
new file mode 100644 (file)
index 0000000..8fe4e1f
Binary files /dev/null and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageEdgeEnhancement.sharedo differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageFFT.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageFFT.sharedo
index 9cf8a58..7b724d9 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageFFT.sharedo and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageFFT.sharedo differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageLogicalOperation.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageLogicalOperation.sharedo
new file mode 100644 (file)
index 0000000..b0a081c
Binary files /dev/null and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageLogicalOperation.sharedo differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageMontageCreate.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageMontageCreate.sharedo
index cffd118..af8bd8b 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageMontageCreate.sharedo and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageMontageCreate.sharedo differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImagePrevitt.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImagePrevitt.sharedo
new file mode 100644 (file)
index 0000000..89f6a37
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diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageRoberts.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageRoberts.sharedo
new file mode 100644 (file)
index 0000000..9d5f910
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diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageSobel.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageSobel.sharedo
new file mode 100644 (file)
index 0000000..a3fd32c
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diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageTopHatTransform.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcImageTopHatTransform.sharedo
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index 0000000..7afcfd0
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diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/mrcImageOperation.sharedo b/src/Objects/DataManip/mrcImage/src/X86LINUX64/mrcImageOperation.sharedo
index d870581..e18e23d 100644 (file)
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diff --git a/src/Objects/DataManip/pdbFile/src/X86LINUX64/libpdbFile.a b/src/Objects/DataManip/pdbFile/src/X86LINUX64/libpdbFile.a
index 69ae94a..68e7c27 100644 (file)
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diff --git a/src/Objects/DataManip/pdbFile/src/X86LINUX64/libpdbFile.debug.a b/src/Objects/DataManip/pdbFile/src/X86LINUX64/libpdbFile.debug.a
index 2b7ad82..040d313 100644 (file)
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diff --git a/src/Objects/DataManip/pdbFile/src/X86LINUX64/libpdbFile.so b/src/Objects/DataManip/pdbFile/src/X86LINUX64/libpdbFile.so
index 18744a7..5e70aa5 100755 (executable)
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diff --git a/src/Objects/DataManip/pdbFile/src/X86LINUX64/pdbTrans.sharedo b/src/Objects/DataManip/pdbFile/src/X86LINUX64/pdbTrans.sharedo
index 0f80ec0..86bb8f6 100644 (file)
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diff --git a/src/Objects/DataManip/simulation/src/X86LINUX64/libsimulation.a b/src/Objects/DataManip/simulation/src/X86LINUX64/libsimulation.a
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diff --git a/src/Objects/DataManip/transform/src/X86LINUX64/libtransform.a b/src/Objects/DataManip/transform/src/X86LINUX64/libtransform.a
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diff --git a/src/Objects/General/AI/src/X86LINUX64/libAI.a b/src/Objects/General/AI/src/X86LINUX64/libAI.a
index 0469c72..f4b17dd 100644 (file)
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diff --git a/src/Objects/General/Array/src/X86LINUX64/libArray.a b/src/Objects/General/Array/src/X86LINUX64/libArray.a
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diff --git a/src/Objects/General/Cluster/src/X86LINUX64/libCluster.a b/src/Objects/General/Cluster/src/X86LINUX64/libCluster.a
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diff --git a/src/Objects/General/eosCuda/src/X86LINUX64/eosCuda.sharedo b/src/Objects/General/eosCuda/src/X86LINUX64/eosCuda.sharedo
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diff --git a/src/Tools/Cluster/clusterLog2ToLog/src/X86LINUX64/clusterLog2ToLog b/src/Tools/Cluster/clusterLog2ToLog/src/X86LINUX64/clusterLog2ToLog
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index 80d55bc..2134e0b 100755 (executable)
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diff --git a/src/Tools/DCDFile/dcdAtomChangeDistanceFromAtom/src/X86LINUX64/dcdAtomChangeDistanceFromAtom b/src/Tools/DCDFile/dcdAtomChangeDistanceFromAtom/src/X86LINUX64/dcdAtomChangeDistanceFromAtom
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diff --git a/src/Tools/Integration/Display2/src/X86LINUX64/Display2 b/src/Tools/Integration/Display2/src/X86LINUX64/Display2
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diff --git a/src/Tools/Integration/StereoDisplay/src/X86LINUX64/.Depend b/src/Tools/Integration/StereoDisplay/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..c9bf52c
--- /dev/null
+++ b/src/Tools/Integration/StereoDisplay/src/X86LINUX64/.Depend
@@ -0,0 +1,130 @@
+StereoDisplay.o: StereoDisplay.c /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h /usr/include/GL/gl.h \
+ /usr/include/GL/glext.h /usr/include/inttypes.h /usr/include/stdint.h \
+ /usr/include/bits/wchar.h /usr/include/GL/glu.h /usr/include/GL/glut.h \
+ /usr/include/GL/freeglut_std.h ../inc/config.h \
+ ../inc/../inc/StereoDisplay.h /home/people/tacyas/Eos/include/genUtil.h \
+ /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/Memory.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/tgaFile.h
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/StereoDisplay.h /home/people/tacyas/Eos/include/genUtil.h \
+ /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/StereoDisplay.h /home/people/tacyas/Eos/include/genUtil.h \
+ /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/StereoDisplay.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/StereoDisplay.h

diff --git a/src/Tools/Integration/StereoDisplay/src/X86LINUX64/StereoDisplay b/src/Tools/Integration/StereoDisplay/src/X86LINUX64/StereoDisplay
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diff --git a/src/Tools/Integration/ctfDisplay/src/X86LINUX64/ctfDisplay b/src/Tools/Integration/ctfDisplay/src/X86LINUX64/ctfDisplay
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diff --git a/src/Tools/Integration/imagesView/src/X86LINUX64/imagesView b/src/Tools/Integration/imagesView/src/X86LINUX64/imagesView
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diff --git a/src/Tools/ctfInfo/tiltInfoDetermine/src/X86LINUX64/tiltInfoDetermine b/src/Tools/ctfInfo/tiltInfoDetermine/src/X86LINUX64/tiltInfoDetermine
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diff --git a/src/Tools/filter/array2mrc/src/X86LINUX64/array2mrc b/src/Tools/filter/array2mrc/src/X86LINUX64/array2mrc
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diff --git a/src/Tools/filter/bin2mrc/src/X86LINUX64/bin2mrc b/src/Tools/filter/bin2mrc/src/X86LINUX64/bin2mrc
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diff --git a/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/.Depend
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index 0000000..0726606
--- /dev/null
+++ b/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/.Depend
@@ -0,0 +1,92 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h ../inc/../inc/mrc2hdf.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h ../inc/../inc/mrc2hdf.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrc2hdf.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrc2hdf.h

diff --git a/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/Makefile b/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..ec61247
--- /dev/null
+++ b/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/Makefile
@@ -0,0 +1,114 @@
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
+
+LIBFILES   = \
+                       $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
+
+LIBFILESDEBUG   = \
+                       $(LIBPREFIX)EosObjects.debug$(LIBSUFFIX) 
+
+SRCC  = \
+                       $(OBJECTNAME).c \
+                       init.c \
+                       argCheck.c \
+                       usage.c  \
+                       util.c 
+
+SRCCXX  = \
+                       $(OBJECTNAME).cc \
+                       init.cc \
+                       argCheck.cc \
+                       usage.cc  \
+                       util.cc 
+
+MODULES    = \
+                       $(OBJECTNAME).o \
+                       init.o \
+                       argCheck.o \
+                       usage.o  \
+                       util.o 
+
+REALMODULES    = \
+                       $(OSTYPE)/$(OBJECTNAME).o \
+                       $(OSTYPE)/init.o \
+                       $(OSTYPE)/argCheck.o \
+                       $(OSTYPE)/usage.o \
+                       $(OSTYPE)/util.o 
+
+MODULESDEBUG    = \
+                       $(OBJECTNAME).debugo \
+                       init.debugo \
+                       argCheck.debugo \
+                       usage.debugo  \
+                       util.debugo 
+
+MODULESCUDAGDB    = \
+                       $(OBJECTNAME).cudagdb.o \
+                       init.cudagdb.o \
+                       argCheck.cudagdb.o \
+                       usage.cudagdb.o  \
+                       util.cudagdb.o 
+
+REALMODULESDEBUG    = \
+                       $(OSTYPE)/$(OBJECTNAME).debugo \
+                       $(OSTYPE)/init.debugo \
+                       $(OSTYPE)/argCheck.debugo \
+                       $(OSTYPE)/usage.debugo \
+                       $(OSTYPE)/util.debugo 
+
+
+$(OBJECTNAME): $(MODULES) $(LIBFILES)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+       fi
+
+
+$(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+
+$(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
+       echo $(NVCC) "$(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@"
+       $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
+
+include ./.Depend
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc

diff --git a/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/X86LINUX64 b/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/X86LINUX64
new file mode 120000 (symlink)
index 0000000..2fba5ac
--- /dev/null
+++ b/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64/X86LINUX64
@@ -0,0 +1 @@
+../../../../../hostdepend/X86LINUX64/src/Tools/mrcImage/mrc2hdf/src/X86LINUX64
\ No newline at end of file

diff --git a/src/Tools/mrcImage/mrc3DExtractZ/src/X86LINUX64/mrc3DExtractZ b/src/Tools/mrcImage/mrc3DExtractZ/src/X86LINUX64/mrc3DExtractZ
index 6413e65..ffe0cf1 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFETnormalizeBySD/src/X86LINUX64/mrcFETnormalizeBySD b/src/Tools/mrcImage/mrcFETnormalizeBySD/src/X86LINUX64/mrcFETnormalizeBySD
index 8595e3e..9040cf9 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTCTFCompensation/src/X86LINUX64/mrcFFTCTFCompensation b/src/Tools/mrcImage/mrcFFTCTFCompensation/src/X86LINUX64/mrcFFTCTFCompensation
index 8d20384..db72503 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTDigitize/src/X86LINUX64/mrcFFTDigitize b/src/Tools/mrcImage/mrcFFTDigitize/src/X86LINUX64/mrcFFTDigitize
index 3232ee8..ad1f30d 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTExpression/src/X86LINUX64/mrcFFTExpression b/src/Tools/mrcImage/mrcFFTExpression/src/X86LINUX64/mrcFFTExpression
index ee321ec..a20d2a0 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTFibreDiagram/src/X86LINUX64/mrcFFTFibreDiagram b/src/Tools/mrcImage/mrcFFTFibreDiagram/src/X86LINUX64/mrcFFTFibreDiagram
index ce571a1..e535ecf 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTFiltering/src/X86LINUX64/mrcFFTFiltering b/src/Tools/mrcImage/mrcFFTFiltering/src/X86LINUX64/mrcFFTFiltering
index a4f5aa1..92fee4d 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTIQEstimation/src/X86LINUX64/mrcFFTIQEstimation b/src/Tools/mrcImage/mrcFFTIQEstimation/src/X86LINUX64/mrcFFTIQEstimation
index 63b3982..2977db2 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTInfo/src/X86LINUX64/mrcFFTInfo b/src/Tools/mrcImage/mrcFFTInfo/src/X86LINUX64/mrcFFTInfo
index e966179..ac774ec 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTLayerLineCheck/src/X86LINUX64/mrcFFTLayerLineCheck b/src/Tools/mrcImage/mrcFFTLayerLineCheck/src/X86LINUX64/mrcFFTLayerLineCheck
index de36408..5ac6616 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcFFTMedianFilter/src/X86LINUX64/mrcFFTMedianFilter b/src/Tools/mrcImage/mrcFFTMedianFilter/src/X86LINUX64/mrcFFTMedianFilter
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diff --git a/src/Tools/mrcImage/mrcFFTProjection/src/X86LINUX64/mrcFFTProjection b/src/Tools/mrcImage/mrcFFTProjection/src/X86LINUX64/mrcFFTProjection
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diff --git a/src/Tools/mrcImage/mrcFFTResampling/src/X86LINUX64/mrcFFTResampling b/src/Tools/mrcImage/mrcFFTResampling/src/X86LINUX64/mrcFFTResampling
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diff --git a/src/Tools/mrcImage/mrcFFTShellInfo/src/X86LINUX64/mrcFFTShellInfo b/src/Tools/mrcImage/mrcFFTShellInfo/src/X86LINUX64/mrcFFTShellInfo
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diff --git a/src/Tools/mrcImage/mrcFFTSizeChange/src/X86LINUX64/mrcFFTSizeChange b/src/Tools/mrcImage/mrcFFTSizeChange/src/X86LINUX64/mrcFFTSizeChange
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diff --git a/src/Tools/mrcImage/mrcFFTSpectrum/src/X86LINUX64/mrcFFTSpectrum b/src/Tools/mrcImage/mrcFFTSpectrum/src/X86LINUX64/mrcFFTSpectrum
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diff --git a/src/Tools/mrcImage/mrcFFTXFiltering/src/X86LINUX64/mrcFFTXFiltering b/src/Tools/mrcImage/mrcFFTXFiltering/src/X86LINUX64/mrcFFTXFiltering
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diff --git a/src/Tools/mrcImage/mrcFFTplainreduce/src/X86LINUX64/mrcFFTplainreduce b/src/Tools/mrcImage/mrcFFTplainreduce/src/X86LINUX64/mrcFFTplainreduce
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diff --git a/src/Tools/mrcImage/mrcFTMeridianEquatorRedece/src/X86LINUX64/mrcFTMeridianEquatorRedece b/src/Tools/mrcImage/mrcFTMeridianEquatorRedece/src/X86LINUX64/mrcFTMeridianEquatorRedece
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diff --git a/src/Tools/mrcImage/mrcImage1DProjectionfrom2D/src/X86LINUX64/mrcImage1DProjectionfrom2D b/src/Tools/mrcImage/mrcImage1DProjectionfrom2D/src/X86LINUX64/mrcImage1DProjectionfrom2D
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diff --git a/src/Tools/mrcImage/mrcImage1dAverageByCorrelation/src/X86LINUX64/mrcImage1dAverageByCorrelation b/src/Tools/mrcImage/mrcImage1dAverageByCorrelation/src/X86LINUX64/mrcImage1dAverageByCorrelation
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diff --git a/src/Tools/mrcImage/mrcImage1dShiftAverageByAnnealing/src/X86LINUX64/mrcImage1dShiftAverageByAnnealing b/src/Tools/mrcImage/mrcImage1dShiftAverageByAnnealing/src/X86LINUX64/mrcImage1dShiftAverageByAnnealing
index f227a96..2e1bfe9 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImage1dShiftByCorrelation/src/X86LINUX64/mrcImage1dShiftByCorrelation b/src/Tools/mrcImage/mrcImage1dShiftByCorrelation/src/X86LINUX64/mrcImage1dShiftByCorrelation
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diff --git a/src/Tools/mrcImage/mrcImage2DBackProjection/src/X86LINUX64/mrcImage2DBackProjection b/src/Tools/mrcImage/mrcImage2DBackProjection/src/X86LINUX64/mrcImage2DBackProjection
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diff --git a/src/Tools/mrcImage/mrcImage2DProjection/src/X86LINUX64/mrcImage2DProjection b/src/Tools/mrcImage/mrcImage2DProjection/src/X86LINUX64/mrcImage2DProjection
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diff --git a/src/Tools/mrcImage/mrcImage2pdb/src/X86LINUX64/mrcImage2pdb b/src/Tools/mrcImage/mrcImage2pdb/src/X86LINUX64/mrcImage2pdb
index 6da46e0..509fafa 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImage3DHighResoEmphasis/src/X86LINUX64/mrcImage3DHighResoEmphasis b/src/Tools/mrcImage/mrcImage3DHighResoEmphasis/src/X86LINUX64/mrcImage3DHighResoEmphasis
index 4200f6c..68f4e02 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImage3DPad/src/X86LINUX64/mrcImage3DPad b/src/Tools/mrcImage/mrcImage3DPad/src/X86LINUX64/mrcImage3DPad
index b1fe891..c75092b 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImage3DPad2/src/X86LINUX64/mrcImage3DPad2 b/src/Tools/mrcImage/mrcImage3DPad2/src/X86LINUX64/mrcImage3DPad2
index efcf5a2..d84c5c2 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImage3DWindowing/src/X86LINUX64/mrcImage3DWindowing b/src/Tools/mrcImage/mrcImage3DWindowing/src/X86LINUX64/mrcImage3DWindowing
index 5c9d322..8dac0c5 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAbnormalValueRemove/src/X86LINUX64/mrcImageAbnormalValueRemove b/src/Tools/mrcImage/mrcImageAbnormalValueRemove/src/X86LINUX64/mrcImageAbnormalValueRemove
index fb56b03..a105a1f 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAdaptiveBinalization/src/X86LINUX64/mrcImageAdaptiveBinalization b/src/Tools/mrcImage/mrcImageAdaptiveBinalization/src/X86LINUX64/mrcImageAdaptiveBinalization
index 64073cb..5564c8b 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAdd/src/X86LINUX64/mrcImageAdd b/src/Tools/mrcImage/mrcImageAdd/src/X86LINUX64/mrcImageAdd
index 1d4cecd..14ce454 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAddValue/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageAddValue/src/X86LINUX64/.Depend
index abe9a39..4290ea8 100644 (file)
--- a/src/Tools/mrcImage/mrcImageAddValue/src/X86LINUX64/.Depend
+++ b/src/Tools/mrcImage/mrcImageAddValue/src/X86LINUX64/.Depend
@@ -96,8 +96,7 @@ mrcImageAddValue.o: mrcImageAddValue.c /usr/include/stdio.h \
  /home/people/tacyas/Eos/include/Matrix3D.h \
  /home/people/tacyas/Eos/include/Array.h \
  /home/people/tacyas/Eos/include/lmrcImageAddValue.h \
- /home/people/tacyas/Eos/include/mrcImage.h \
- /home/people/tacyas/Eos/include/eosCuda.h
+ /home/people/tacyas/Eos/include/mrcImage.h
 usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
  /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
  /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \

diff --git a/src/Tools/mrcImage/mrcImageAreaCalc/src/X86LINUX64/mrcImageAreaCalc b/src/Tools/mrcImage/mrcImageAreaCalc/src/X86LINUX64/mrcImageAreaCalc
index eb75ee0..8489b19 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageAreaCalc/src/X86LINUX64/mrcImageAreaCalc and b/src/Tools/mrcImage/mrcImageAreaCalc/src/X86LINUX64/mrcImageAreaCalc differ

diff --git a/src/Tools/mrcImage/mrcImageAsProbability/src/X86LINUX64/mrcImageAsProbability b/src/Tools/mrcImage/mrcImageAsProbability/src/X86LINUX64/mrcImageAsProbability
index c5d6ba6..1959b24 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageAsProbability/src/X86LINUX64/mrcImageAsProbability and b/src/Tools/mrcImage/mrcImageAsProbability/src/X86LINUX64/mrcImageAsProbability differ

diff --git a/src/Tools/mrcImage/mrcImageAssignedToTFofPDB/src/X86LINUX64/mrcImageAssignedToTFofPDB b/src/Tools/mrcImage/mrcImageAssignedToTFofPDB/src/X86LINUX64/mrcImageAssignedToTFofPDB
index d836693..a6c52bc 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAutoCorrelationWithWindowing/src/X86LINUX64/mrcImageAutoCorrelationWithWindowing b/src/Tools/mrcImage/mrcImageAutoCorrelationWithWindowing/src/X86LINUX64/mrcImageAutoCorrelationWithWindowing
index a1bf230..7c1ce1f 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAutoFilamentExtract/src/X86LINUX64/mrcImageAutoFilamentExtract b/src/Tools/mrcImage/mrcImageAutoFilamentExtract/src/X86LINUX64/mrcImageAutoFilamentExtract
index aa8ec4e..908ea37 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAutoFilamentExtractResultAnalysis/src/X86LINUX64/mrcImageAutoFilamentExtractResultAnalysis b/src/Tools/mrcImage/mrcImageAutoFilamentExtractResultAnalysis/src/X86LINUX64/mrcImageAutoFilamentExtractResultAnalysis
index a9d5119..5f28354 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAutoRotationCorrelation/src/X86LINUX64/mrcImageAutoRotationCorrelation b/src/Tools/mrcImage/mrcImageAutoRotationCorrelation/src/X86LINUX64/mrcImageAutoRotationCorrelation
index 328a400..1f5acae 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAutoRotationCorrelation3D/src/X86LINUX64/mrcImageAutoRotationCorrelation3D b/src/Tools/mrcImage/mrcImageAutoRotationCorrelation3D/src/X86LINUX64/mrcImageAutoRotationCorrelation3D
index eb5ce7d..5f93904 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageAverage/src/X86LINUX64/mrcImageAverage b/src/Tools/mrcImage/mrcImageAverage/src/X86LINUX64/mrcImageAverage
index 768ba5c..1b9be78 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageBandPassFilter/src/X86LINUX64/mrcImageBandPassFilter b/src/Tools/mrcImage/mrcImageBandPassFilter/src/X86LINUX64/mrcImageBandPassFilter
index 80efcc5..d4eb70d 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageBilateralFilter/src/X86LINUX64/mrcImageBilateralFilter b/src/Tools/mrcImage/mrcImageBilateralFilter/src/X86LINUX64/mrcImageBilateralFilter
index 1045de6..00221ac 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageBinalization/src/X86LINUX64/mrcImageBinalization b/src/Tools/mrcImage/mrcImageBinalization/src/X86LINUX64/mrcImageBinalization
index 8f21343..27f88d0 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageBlockMerge/src/X86LINUX64/mrcImageBlockMerge b/src/Tools/mrcImage/mrcImageBlockMerge/src/X86LINUX64/mrcImageBlockMerge
index 3281b6c..555af6e 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageBottomHatTransform/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageBottomHatTransform/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..d099477
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageBottomHatTransform/src/X86LINUX64/.Depend
@@ -0,0 +1,130 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageBottomHatTransform.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageBottomHatTransform.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrcImageBottomHatTransform.o: mrcImageBottomHatTransform.c \
+ /usr/include/stdio.h /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageBottomHatTransform.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/lmrcImageMorphology.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Array.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageBottomHatTransform.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageBottomHatTransform.h

diff --git a/src/Tools/mrcImage/mrcImageBottomHatTransform/src/X86LINUX64/Makefile b/src/Tools/mrcImage/mrcImageBottomHatTransform/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..ec61247
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageBottomHatTransform/src/X86LINUX64/Makefile
@@ -0,0 +1,114 @@
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
+
+LIBFILES   = \
+                       $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
+
+LIBFILESDEBUG   = \
+                       $(LIBPREFIX)EosObjects.debug$(LIBSUFFIX) 
+
+SRCC  = \
+                       $(OBJECTNAME).c \
+                       init.c \
+                       argCheck.c \
+                       usage.c  \
+                       util.c 
+
+SRCCXX  = \
+                       $(OBJECTNAME).cc \
+                       init.cc \
+                       argCheck.cc \
+                       usage.cc  \
+                       util.cc 
+
+MODULES    = \
+                       $(OBJECTNAME).o \
+                       init.o \
+                       argCheck.o \
+                       usage.o  \
+                       util.o 
+
+REALMODULES    = \
+                       $(OSTYPE)/$(OBJECTNAME).o \
+                       $(OSTYPE)/init.o \
+                       $(OSTYPE)/argCheck.o \
+                       $(OSTYPE)/usage.o \
+                       $(OSTYPE)/util.o 
+
+MODULESDEBUG    = \
+                       $(OBJECTNAME).debugo \
+                       init.debugo \
+                       argCheck.debugo \
+                       usage.debugo  \
+                       util.debugo 
+
+MODULESCUDAGDB    = \
+                       $(OBJECTNAME).cudagdb.o \
+                       init.cudagdb.o \
+                       argCheck.cudagdb.o \
+                       usage.cudagdb.o  \
+                       util.cudagdb.o 
+
+REALMODULESDEBUG    = \
+                       $(OSTYPE)/$(OBJECTNAME).debugo \
+                       $(OSTYPE)/init.debugo \
+                       $(OSTYPE)/argCheck.debugo \
+                       $(OSTYPE)/usage.debugo \
+                       $(OSTYPE)/util.debugo 
+
+
+$(OBJECTNAME): $(MODULES) $(LIBFILES)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+       fi
+
+
+$(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+
+$(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
+       echo $(NVCC) "$(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@"
+       $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
+
+include ./.Depend
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc

diff --git a/src/Tools/mrcImage/mrcImageCCDNoiseRemove/src/X86LINUX64/mrcImageCCDNoiseRemove b/src/Tools/mrcImage/mrcImageCCDNoiseRemove/src/X86LINUX64/mrcImageCCDNoiseRemove
index 36005fe..f990956 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCTFCompensation/src/X86LINUX64/mrcImageCTFCompensation b/src/Tools/mrcImage/mrcImageCTFCompensation/src/X86LINUX64/mrcImageCTFCompensation
index a2aec99..835845e 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageCTFCompensation/src/X86LINUX64/mrcImageCTFCompensation and b/src/Tools/mrcImage/mrcImageCTFCompensation/src/X86LINUX64/mrcImageCTFCompensation differ

diff --git a/src/Tools/mrcImage/mrcImageCTFCompensationForTiltImage/src/X86LINUX64/mrcImageCTFCompensationForTiltImage b/src/Tools/mrcImage/mrcImageCTFCompensationForTiltImage/src/X86LINUX64/mrcImageCTFCompensationForTiltImage
index 546c4c7..0a774e4 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCTFDetermination/src/X86LINUX64/mrcImageCTFDetermination b/src/Tools/mrcImage/mrcImageCTFDetermination/src/X86LINUX64/mrcImageCTFDetermination
index 868fcf1..372c0d8 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCTFObservation/src/X86LINUX64/mrcImageCTFObservation b/src/Tools/mrcImage/mrcImageCTFObservation/src/X86LINUX64/mrcImageCTFObservation
index ce88a72..89ed2aa 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCTFSN/src/X86LINUX64/mrcImageCTFSN b/src/Tools/mrcImage/mrcImageCTFSN/src/X86LINUX64/mrcImageCTFSN
index 8810170..100bee5 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCVE/src/X86LINUX64/mrcImageCVE b/src/Tools/mrcImage/mrcImageCVE/src/X86LINUX64/mrcImageCVE
index 39114d6..d1996dd 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCenterDensityChange/src/X86LINUX64/mrcImageCenterDensityChange b/src/Tools/mrcImage/mrcImageCenterDensityChange/src/X86LINUX64/mrcImageCenterDensityChange
index fd2b7b7..7d53ade 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCenterGet/src/X86LINUX64/mrcImageCenterGet b/src/Tools/mrcImage/mrcImageCenterGet/src/X86LINUX64/mrcImageCenterGet
index 9ac01be..6649ed3 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCenterOfMassCalculate/src/X86LINUX64/mrcImageCenterOfMassCalculate b/src/Tools/mrcImage/mrcImageCenterOfMassCalculate/src/X86LINUX64/mrcImageCenterOfMassCalculate
index 02ef98a..7a0fa9e 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCircumferentialProjection/src/X86LINUX64/mrcImageCircumferentialProjection b/src/Tools/mrcImage/mrcImageCircumferentialProjection/src/X86LINUX64/mrcImageCircumferentialProjection
index 25104ce..c60a0b3 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageClosing/src/X86LINUX64/mrcImageClosing b/src/Tools/mrcImage/mrcImageClosing/src/X86LINUX64/mrcImageClosing
index ebc4033..a36141e 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/mrcImageClusterAnalysis b/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/mrcImageClusterAnalysis
index 73d4c86..c9ca11e 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageColoring/src/X86LINUX64/mrcImageColoring b/src/Tools/mrcImage/mrcImageColoring/src/X86LINUX64/mrcImageColoring
index 1c8acb9..8294803 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageConnection/src/X86LINUX64/mrcImageConnection b/src/Tools/mrcImage/mrcImageConnection/src/X86LINUX64/mrcImageConnection
index 644d8e5..e6875e7 100755 (executable)
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index 1d1b71a..33d7385 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageContourSurfaceCreate/src/X86LINUX64/mrcImageContourSurfaceCreate b/src/Tools/mrcImage/mrcImageContourSurfaceCreate/src/X86LINUX64/mrcImageContourSurfaceCreate
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diff --git a/src/Tools/mrcImage/mrcImageConvolution/src/X86LINUX64/mrcImageConvolution b/src/Tools/mrcImage/mrcImageConvolution/src/X86LINUX64/mrcImageConvolution
index 94a6aae..5241a56 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCoreImageCalc/src/X86LINUX64/mrcImageCoreImageCalc b/src/Tools/mrcImage/mrcImageCoreImageCalc/src/X86LINUX64/mrcImageCoreImageCalc
index 6562cd9..1ac85c3 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCorrelationInFourierSpace/src/X86LINUX64/mrcImageCorrelationInFourierSpace b/src/Tools/mrcImage/mrcImageCorrelationInFourierSpace/src/X86LINUX64/mrcImageCorrelationInFourierSpace
index caeef9c..2ec3418 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCrystalCreate/src/X86LINUX64/mrcImageCrystalCreate b/src/Tools/mrcImage/mrcImageCrystalCreate/src/X86LINUX64/mrcImageCrystalCreate
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diff --git a/src/Tools/mrcImage/mrcImageDeadPixelCorrection/src/X86LINUX64/mrcImageDeadPixelCorrection b/src/Tools/mrcImage/mrcImageDeadPixelCorrection/src/X86LINUX64/mrcImageDeadPixelCorrection
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diff --git a/src/Tools/mrcImage/mrcImageDensityChangeEstimation/src/X86LINUX64/mrcImageDensityChangeEstimation b/src/Tools/mrcImage/mrcImageDensityChangeEstimation/src/X86LINUX64/mrcImageDensityChangeEstimation
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diff --git a/src/Tools/mrcImage/mrcImageDensityInfo/src/X86LINUX64/mrcImageDensityInfo b/src/Tools/mrcImage/mrcImageDensityInfo/src/X86LINUX64/mrcImageDensityInfo
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diff --git a/src/Tools/mrcImage/mrcImageDensityNormalization/src/X86LINUX64/mrcImageDensityNormalization b/src/Tools/mrcImage/mrcImageDensityNormalization/src/X86LINUX64/mrcImageDensityNormalization
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diff --git a/src/Tools/mrcImage/mrcImageDensityNormalizationByImage/src/X86LINUX64/mrcImageDensityNormalizationByImage b/src/Tools/mrcImage/mrcImageDensityNormalizationByImage/src/X86LINUX64/mrcImageDensityNormalizationByImage
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diff --git a/src/Tools/mrcImage/mrcImageDilation/src/X86LINUX64/mrcImageDilation b/src/Tools/mrcImage/mrcImageDilation/src/X86LINUX64/mrcImageDilation
index 24aaf75..6e88a7a 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageDisplayDensityAsTempFactor/src/X86LINUX64/mrcImageDisplayDensityAsTempFactor b/src/Tools/mrcImage/mrcImageDisplayDensityAsTempFactor/src/X86LINUX64/mrcImageDisplayDensityAsTempFactor
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diff --git a/src/Tools/mrcImage/mrcImageDistanceConversion/src/X86LINUX64/mrcImageDistanceConversion b/src/Tools/mrcImage/mrcImageDistanceConversion/src/X86LINUX64/mrcImageDistanceConversion
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diff --git a/src/Tools/mrcImage/mrcImageDivideInfoForTomography/src/X86LINUX64/mrcImageDivideInfoForTomography b/src/Tools/mrcImage/mrcImageDivideInfoForTomography/src/X86LINUX64/mrcImageDivideInfoForTomography
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diff --git a/src/Tools/mrcImage/mrcImageDivideIntoTwoImages/src/X86LINUX64/mrcImageDivideIntoTwoImages b/src/Tools/mrcImage/mrcImageDivideIntoTwoImages/src/X86LINUX64/mrcImageDivideIntoTwoImages
index 2a71ac1..6ae1208 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..22e7327
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/.Depend
@@ -0,0 +1,129 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageDividedByFile.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageDividedByFile.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrcImageDividedByFile.o: mrcImageDividedByFile.c /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageDividedByFile.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Array.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageDividedByFile.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageDividedByFile.h

diff --git a/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/Makefile b/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..ec61247
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/Makefile
@@ -0,0 +1,114 @@
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
+
+LIBFILES   = \
+                       $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
+
+LIBFILESDEBUG   = \
+                       $(LIBPREFIX)EosObjects.debug$(LIBSUFFIX) 
+
+SRCC  = \
+                       $(OBJECTNAME).c \
+                       init.c \
+                       argCheck.c \
+                       usage.c  \
+                       util.c 
+
+SRCCXX  = \
+                       $(OBJECTNAME).cc \
+                       init.cc \
+                       argCheck.cc \
+                       usage.cc  \
+                       util.cc 
+
+MODULES    = \
+                       $(OBJECTNAME).o \
+                       init.o \
+                       argCheck.o \
+                       usage.o  \
+                       util.o 
+
+REALMODULES    = \
+                       $(OSTYPE)/$(OBJECTNAME).o \
+                       $(OSTYPE)/init.o \
+                       $(OSTYPE)/argCheck.o \
+                       $(OSTYPE)/usage.o \
+                       $(OSTYPE)/util.o 
+
+MODULESDEBUG    = \
+                       $(OBJECTNAME).debugo \
+                       init.debugo \
+                       argCheck.debugo \
+                       usage.debugo  \
+                       util.debugo 
+
+MODULESCUDAGDB    = \
+                       $(OBJECTNAME).cudagdb.o \
+                       init.cudagdb.o \
+                       argCheck.cudagdb.o \
+                       usage.cudagdb.o  \
+                       util.cudagdb.o 
+
+REALMODULESDEBUG    = \
+                       $(OSTYPE)/$(OBJECTNAME).debugo \
+                       $(OSTYPE)/init.debugo \
+                       $(OSTYPE)/argCheck.debugo \
+                       $(OSTYPE)/usage.debugo \
+                       $(OSTYPE)/util.debugo 
+
+
+$(OBJECTNAME): $(MODULES) $(LIBFILES)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+       fi
+
+
+$(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+
+$(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
+       echo $(NVCC) "$(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@"
+       $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
+
+include ./.Depend
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc

diff --git a/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/mrcImageDividedByFile b/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/mrcImageDividedByFile
new file mode 100755 (executable)
index 0000000..381e405
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageDividedByFile/src/X86LINUX64/mrcImageDividedByFile differ

diff --git a/src/Tools/mrcImage/mrcImageEdgeEnhancement/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageEdgeEnhancement/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..311372c
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageEdgeEnhancement/src/X86LINUX64/.Depend
@@ -0,0 +1,131 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageEdgeEnhancement.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageEdgeEnhancement.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrcImageEdgeEnhancement.o: mrcImageEdgeEnhancement.c /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageEdgeEnhancement.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Array.h \
+ /home/people/tacyas/Eos/include/lmrcImageEdgeEnhancement.h \
+ /home/people/tacyas/Eos/include/mrcImage.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageEdgeEnhancement.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageEdgeEnhancement.h

diff --git a/src/Tools/mrcImage/mrcImageEdgeEnhancement/src/X86LINUX64/Makefile b/src/Tools/mrcImage/mrcImageEdgeEnhancement/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..ec61247
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageEdgeEnhancement/src/X86LINUX64/Makefile
@@ -0,0 +1,114 @@
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
+
+LIBFILES   = \
+                       $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
+
+LIBFILESDEBUG   = \
+                       $(LIBPREFIX)EosObjects.debug$(LIBSUFFIX) 
+
+SRCC  = \
+                       $(OBJECTNAME).c \
+                       init.c \
+                       argCheck.c \
+                       usage.c  \
+                       util.c 
+
+SRCCXX  = \
+                       $(OBJECTNAME).cc \
+                       init.cc \
+                       argCheck.cc \
+                       usage.cc  \
+                       util.cc 
+
+MODULES    = \
+                       $(OBJECTNAME).o \
+                       init.o \
+                       argCheck.o \
+                       usage.o  \
+                       util.o 
+
+REALMODULES    = \
+                       $(OSTYPE)/$(OBJECTNAME).o \
+                       $(OSTYPE)/init.o \
+                       $(OSTYPE)/argCheck.o \
+                       $(OSTYPE)/usage.o \
+                       $(OSTYPE)/util.o 
+
+MODULESDEBUG    = \
+                       $(OBJECTNAME).debugo \
+                       init.debugo \
+                       argCheck.debugo \
+                       usage.debugo  \
+                       util.debugo 
+
+MODULESCUDAGDB    = \
+                       $(OBJECTNAME).cudagdb.o \
+                       init.cudagdb.o \
+                       argCheck.cudagdb.o \
+                       usage.cudagdb.o  \
+                       util.cudagdb.o 
+
+REALMODULESDEBUG    = \
+                       $(OSTYPE)/$(OBJECTNAME).debugo \
+                       $(OSTYPE)/init.debugo \
+                       $(OSTYPE)/argCheck.debugo \
+                       $(OSTYPE)/usage.debugo \
+                       $(OSTYPE)/util.debugo 
+
+
+$(OBJECTNAME): $(MODULES) $(LIBFILES)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+       fi
+
+
+$(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+
+$(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
+       echo $(NVCC) "$(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@"
+       $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
+
+include ./.Depend
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc

diff --git a/src/Tools/mrcImage/mrcImageEdgeEnhancement/src/X86LINUX64/mrcImageEdgeEnhancement b/src/Tools/mrcImage/mrcImageEdgeEnhancement/src/X86LINUX64/mrcImageEdgeEnhancement
new file mode 100755 (executable)
index 0000000..fd1bc65
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diff --git a/src/Tools/mrcImage/mrcImageEdgeImageGet/src/X86LINUX64/mrcImageEdgeImageGet b/src/Tools/mrcImage/mrcImageEdgeImageGet/src/X86LINUX64/mrcImageEdgeImageGet
index d25c104..9899c1d 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageEdgeImageGet/src/X86LINUX64/mrcImageEdgeImageGet and b/src/Tools/mrcImage/mrcImageEdgeImageGet/src/X86LINUX64/mrcImageEdgeImageGet differ

diff --git a/src/Tools/mrcImage/mrcImageErosion/src/X86LINUX64/mrcImageErosion b/src/Tools/mrcImage/mrcImageErosion/src/X86LINUX64/mrcImageErosion
index 9c24ea6..70027de 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageErosion/src/X86LINUX64/mrcImageErosion and b/src/Tools/mrcImage/mrcImageErosion/src/X86LINUX64/mrcImageErosion differ

diff --git a/src/Tools/mrcImage/mrcImageEstimateTiltImage/src/X86LINUX64/mrcImageEstimateTiltImage b/src/Tools/mrcImage/mrcImageEstimateTiltImage/src/X86LINUX64/mrcImageEstimateTiltImage
index 0954149..d9bedcb 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageEstimateTiltImage/src/X86LINUX64/mrcImageEstimateTiltImage and b/src/Tools/mrcImage/mrcImageEstimateTiltImage/src/X86LINUX64/mrcImageEstimateTiltImage differ

diff --git a/src/Tools/mrcImage/mrcImageExpression/src/X86LINUX64/mrcImageExpression b/src/Tools/mrcImage/mrcImageExpression/src/X86LINUX64/mrcImageExpression
index 5c0a2c5..41b45bd 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageExpression/src/X86LINUX64/mrcImageExpression and b/src/Tools/mrcImage/mrcImageExpression/src/X86LINUX64/mrcImageExpression differ

diff --git a/src/Tools/mrcImage/mrcImageFFT/src/X86LINUX64/mrcImageFFT b/src/Tools/mrcImage/mrcImageFFT/src/X86LINUX64/mrcImageFFT
index d72d42d..61970e3 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFFTLayerLineExtraction/src/X86LINUX64/mrcImageFFTLayerLineExtraction b/src/Tools/mrcImage/mrcImageFFTLayerLineExtraction/src/X86LINUX64/mrcImageFFTLayerLineExtraction
index 7b2d5a8..3715591 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFOMCalc.org/src/X86LINUX64/mrcImageFOMCalc b/src/Tools/mrcImage/mrcImageFOMCalc.org/src/X86LINUX64/mrcImageFOMCalc
index 1410310..cf65698 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFOMCalc/src/X86LINUX64/mrcImageFOMCalc b/src/Tools/mrcImage/mrcImageFOMCalc/src/X86LINUX64/mrcImageFOMCalc
index 1410310..cf65698 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFeatureExtraction/src/X86LINUX64/mrcImageFeatureExtraction b/src/Tools/mrcImage/mrcImageFeatureExtraction/src/X86LINUX64/mrcImageFeatureExtraction
index 5c6b283..1a4bfdc 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFilterCreate/src/X86LINUX64/mrcImageFilterCreate b/src/Tools/mrcImage/mrcImageFilterCreate/src/X86LINUX64/mrcImageFilterCreate
index 01344c7..7783d5c 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFilteringbyFile/src/X86LINUX64/mrcImageFilteringbyFile b/src/Tools/mrcImage/mrcImageFilteringbyFile/src/X86LINUX64/mrcImageFilteringbyFile
index ab7e043..75b600a 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFilteringbyFileForVariance/src/X86LINUX64/mrcImageFilteringbyFileForVariance b/src/Tools/mrcImage/mrcImageFilteringbyFileForVariance/src/X86LINUX64/mrcImageFilteringbyFileForVariance
index c4cb782..fca5485 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFourierShellCorrelation/src/X86LINUX64/mrcImageFourierShellCorrelation b/src/Tools/mrcImage/mrcImageFourierShellCorrelation/src/X86LINUX64/mrcImageFourierShellCorrelation
index bedc1d7..faf6e1b 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageFractalFourierShellCorrelation/src/X86LINUX64/mrcImageFractalFourierShellCorrelation b/src/Tools/mrcImage/mrcImageFractalFourierShellCorrelation/src/X86LINUX64/mrcImageFractalFourierShellCorrelation
index 39e571b..6a8410b 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageGaussDisc/src/X86LINUX64/mrcImageGaussDisc b/src/Tools/mrcImage/mrcImageGaussDisc/src/X86LINUX64/mrcImageGaussDisc
index 3dcc824..5f5c454 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageGaussSphere/src/X86LINUX64/mrcImageGaussSphere b/src/Tools/mrcImage/mrcImageGaussSphere/src/X86LINUX64/mrcImageGaussSphere
index 8ae286e..a4e6688 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageHeaderChange/src/X86LINUX64/mrcImageHeaderChange b/src/Tools/mrcImage/mrcImageHeaderChange/src/X86LINUX64/mrcImageHeaderChange
index 93b859a..4133e6e 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageHelicalAveraging/src/X86LINUX64/mrcImageHelicalAveraging b/src/Tools/mrcImage/mrcImageHelicalAveraging/src/X86LINUX64/mrcImageHelicalAveraging
index ffa8e77..5e36908 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageHelicalMappingFrom2DImage/src/X86LINUX64/mrcImageHelicalMappingFrom2DImage b/src/Tools/mrcImage/mrcImageHelicalMappingFrom2DImage/src/X86LINUX64/mrcImageHelicalMappingFrom2DImage
index c8ffaff..8faf352 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageHelicalMasking/src/X86LINUX64/mrcImageHelicalMasking b/src/Tools/mrcImage/mrcImageHelicalMasking/src/X86LINUX64/mrcImageHelicalMasking
index 97e41db..7a4bdbf 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageHelicalMaskingBy2DImage/src/X86LINUX64/mrcImageHelicalMaskingBy2DImage b/src/Tools/mrcImage/mrcImageHelicalMaskingBy2DImage/src/X86LINUX64/mrcImageHelicalMaskingBy2DImage
index 2a98fce..e2bfb0e 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageHelicalProjection/src/X86LINUX64/mrcImageHelicalProjection b/src/Tools/mrcImage/mrcImageHelicalProjection/src/X86LINUX64/mrcImageHelicalProjection
index 01d392c..f882650 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageHighPassFilter/src/X86LINUX64/mrcImageHighPassFilter b/src/Tools/mrcImage/mrcImageHighPassFilter/src/X86LINUX64/mrcImageHighPassFilter
index d990ccb..d4aa8b9 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageLogicalOperation/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageLogicalOperation/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..0ec75f1
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageLogicalOperation/src/X86LINUX64/.Depend
@@ -0,0 +1,130 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageLogicalOperation.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageLogicalOperation.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrcImageLogicalOperation.o: mrcImageLogicalOperation.c \
+ /usr/include/stdio.h /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageLogicalOperation.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/lmrcImageLogic.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Array.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageLogicalOperation.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageLogicalOperation.h

diff --git a/src/Tools/mrcImage/mrcImageTopHatTransform/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageTopHatTransform/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..70cf5a9
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageTopHatTransform/src/X86LINUX64/.Depend
@@ -0,0 +1,130 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageTopHatTransform.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageTopHatTransform.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrcImageTopHatTransform.o: mrcImageTopHatTransform.c /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageTopHatTransform.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/lmrcImageMorphology.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Array.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageTopHatTransform.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageTopHatTransform.h