set auto_index(::CTF2D::CTFCalculation) [list source [file join $dir ctfDisplay.wish]]
set auto_index(::CTF2D::ScatteringCalc) [list source [file join $dir ctfDisplay.wish]]
set auto_index(::CTF2D::ctfInfoSave) [list source [file join $dir ctfDisplay.wish]]
-set auto_index(::CTF2D::ctfInfoSaveDefaultDir) [list source [file join $dir ctfDisplay.wish]]
-set auto_index(::CTF2D::ctfInfoSaveDefault) [list source [file join $dir ctfDisplay.wish]]
set auto_index(::CTF2D::ctfInfoLoad) [list source [file join $dir ctfDisplay.wish]]
-set auto_index(::CTF2D::dummyFunc) [list source [file join $dir ctfDisplay.wish]]
#ifndef STRING_H
#define STRING_H
-
#include <stdio.h>
/* constant begin */
#define EOS_BAYES_H
typedef struct eosBayesDistribution {
+ //char* name;
float min;
float max;
float delta;
int n;
+ float* value;
float* prob;
} eosBayesDistribution;
/* eosBayesInit.c */
// Initialization of eosBays
-extern void eosBayesInit(eosBayes* b, int numDistribution, int numLikelihood, int mode);
+extern void leosBayesInit(eosBayes* b, int numDistribution, int numLikelihood, int mode);
+
+extern void eosBayesCondition(FILE* fptIn, eosBayes* d, eosBayesDistributionInfo* llinfo, int mode);
// Initialize Each distribution of eosBayesDistributions
-extern void eosBayesDistributionInit(eosBayesDistributions* d, float min, float max, float delta, int mode);
+extern void eosBayesDistributionInit(eosBayesDistribution* d,eosBayesDistributionInfo* info, int mode);
// Initialize probe of Each distribution of eosBayesDistriubutions
-extern void eosBayesDistributionInitialProbabilitySet(eosBayesDistribution* d, int mode);
+extern void eosBayesDistributionInitialProbabilitySet(eosBayesDistribution* d, eosBayesDistributionInfo* info, int mode);
/* eosBayesEstimation.c */
extern void eosBayesEstimation(eosBayesDistribution* d, int mode);
have_library: checking for main() in -lGL... -------------------- no
-"gcc -o conftest -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1/x86_64-darwin13.2.0 -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1/ruby/backward -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1 -I. -I/Users/tacyas/Eos/include -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -O3 -ggdb -Wextra -Wno-unused-parameter -Wno-parentheses -Wpointer-arith -Wwrite-strings -Wno-missing-field-initializers -Wshorten-64-to-32 -Wno-long-long -pipe conftest.c -L. -L/Users/tacyas/Eos/util/X86MAC64/lib -L/usr/lib -L/Users/tacyas/Eos/lib/X86MAC64 -L/Users/tacyas/Eos/util/X86MAC64/lib -L. -L/usr/local/lib -lruby-static -lpthread -ldl -lobjc "
-/Users/tacyas/Eos/util/X86MAC64/lib/ruby/1.9.1/mkmf.rb:305: warning: Insecure world writable dir /usr/local/cuda in PATH, mode 040777
+"xcrun clang -o conftest -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0/universal-darwin14 -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0/ruby/backward -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0 -I. -I/Users/hisanagakouji/Eos/include -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -D_DARWIN_UNLIMITED_SELECT -D_REENTRANT -g -Os -pipe -DHAVE_GCC_SYNC_BUILTINS conftest.c -L. -L/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/lib -L/usr/lib -L/Users/hisanagakouji/Eos/lib/X86MAC64 -L/Users/hisanagakouji/Eos/util/X86MAC64/lib -L. -L/usr/local/lib -arch x86_64 -arch i386 -lruby.2.0.0 -lpthread -ldl -lobjc "
+/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/lib/ruby/2.0.0/mkmf.rb:373: warning: Insecure world writable dir /Developer/NVIDIA/CUDA-6.5/bin in PATH, mode 040777
checked program was:
/* begin */
1: #include "ruby.h"
2:
-3: int main() {return 0;}
+3: int main(int argc, char **argv)
+4: {
+5: return 0;
+6: }
/* end */
-"gcc -o conftest -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1/x86_64-darwin13.2.0 -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1/ruby/backward -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1 -I. -I/Users/tacyas/Eos/include -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -O3 -ggdb -Wextra -Wno-unused-parameter -Wno-parentheses -Wpointer-arith -Wwrite-strings -Wno-missing-field-initializers -Wshorten-64-to-32 -Wno-long-long -pipe conftest.c -L. -L/Users/tacyas/Eos/util/X86MAC64/lib -L/usr/lib -L/Users/tacyas/Eos/lib/X86MAC64 -L/Users/tacyas/Eos/util/X86MAC64/lib -L. -L/usr/local/lib -lruby-static -lGL -lpthread -ldl -lobjc "
-ld: library not found for -lGL
-clang: error: linker command failed with exit code 1 (use -v to see invocation)
+"xcrun clang -o conftest -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0/universal-darwin14 -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0/ruby/backward -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0 -I. -I/Users/hisanagakouji/Eos/include -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -D_DARWIN_UNLIMITED_SELECT -D_REENTRANT -g -Os -pipe -DHAVE_GCC_SYNC_BUILTINS conftest.c -L. -L/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/lib -L/usr/lib -L/Users/hisanagakouji/Eos/lib/X86MAC64 -L/Users/hisanagakouji/Eos/util/X86MAC64/lib -L. -L/usr/local/lib -arch x86_64 -arch i386 -lruby.2.0.0 -lGL -lpthread -ldl -lobjc "
+conftest.c:5:57: error: use of undeclared identifier 'main'
+int t(void) { void ((*volatile p)()); p = (void ((*)()))main; return 0; }
+ ^
+1 error generated.
checked program was:
/* begin */
-1: #include "ruby.h"
-2:
-3: /*top*/
-4: int main() {return 0;}
-5: int t() { void ((*volatile p)()); p = (void ((*)()))main; return 0; }
+ 1: #include "ruby.h"
+ 2:
+ 3: /*top*/
+ 4: extern int t(void);
+ 5: int t(void) { void ((*volatile p)()); p = (void ((*)()))main; return 0; }
+ 6: int main(int argc, char **argv)
+ 7: {
+ 8: if (argc > 1000000) {
+ 9: printf("%p", &t);
+10: }
+11:
+12: return 0;
+13: }
/* end */
-"gcc -o conftest -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1/x86_64-darwin13.2.0 -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1/ruby/backward -I/Users/tacyas/Eos/util/X86MAC64/include/ruby-1.9.1 -I. -I/Users/tacyas/Eos/include -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -O3 -ggdb -Wextra -Wno-unused-parameter -Wno-parentheses -Wpointer-arith -Wwrite-strings -Wno-missing-field-initializers -Wshorten-64-to-32 -Wno-long-long -pipe conftest.c -L. -L/Users/tacyas/Eos/util/X86MAC64/lib -L/usr/lib -L/Users/tacyas/Eos/lib/X86MAC64 -L/Users/tacyas/Eos/util/X86MAC64/lib -L. -L/usr/local/lib -lruby-static -lGL -lpthread -ldl -lobjc "
+"xcrun clang -o conftest -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0/universal-darwin14 -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0/ruby/backward -I/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/include/ruby-2.0.0 -I. -I/Users/hisanagakouji/Eos/include -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -D_DARWIN_UNLIMITED_SELECT -D_REENTRANT -g -Os -pipe -DHAVE_GCC_SYNC_BUILTINS conftest.c -L. -L/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/lib -L/usr/lib -L/Users/hisanagakouji/Eos/lib/X86MAC64 -L/Users/hisanagakouji/Eos/util/X86MAC64/lib -L. -L/usr/local/lib -arch x86_64 -arch i386 -lruby.2.0.0 -lGL -lpthread -ldl -lobjc "
+conftest.c:5:15: warning: implicit declaration of function 'main' is invalid in C99 [-Wimplicit-function-declaration]
+int t(void) { main(); return 0; }
+ ^
+1 warning generated.
ld: library not found for -lGL
+conftest.c:5:15: warning: implicit declaration of function 'main' is invalid in C99 [-Wimplicit-function-declaration]
+int t(void) { main(); return 0; }
+ ^
+1 warning generated.
clang: error: linker command failed with exit code 1 (use -v to see invocation)
checked program was:
/* begin */
-1: #include "ruby.h"
-2:
-3: /*top*/
-4: int main() {return 0;}
-5: int t() { main(); return 0; }
+ 1: #include "ruby.h"
+ 2:
+ 3: /*top*/
+ 4: extern int t(void);
+ 5: int t(void) { main(); return 0; }
+ 6: int main(int argc, char **argv)
+ 7: {
+ 8: if (argc > 1000000) {
+ 9: printf("%p", &t);
+10: }
+11:
+12: return 0;
+13: }
/* end */
--------------------
--- /dev/null
+<HR>
+<A NAME="Information">
+<H2>Information from source codes</H2>
+</A>
+<PRE>
+</PRE>
+<HR>
+<A NAME="include">
+<H2>eosBayes.h</H2>
+</A>
+<PRE>
+#ifndef EOS_BAYES_H
+#define EOS_BAYES_H
+
+typedef struct eosBayesDistribution {
+ //char* name;
+ float min;
+ float max;
+ float delta;
+ int n;
+ float* value;
+ float* prob;
+} eosBayesDistribution;
+
+
+typedef struct eosBayes {
+ int numDistribution;
+ eosBayesDistribution* prior;
+ eosBayesDistribution* posterior;
+
+ int numLikelihood;
+ eosBayesDistribution* likelihood;
+} eosBayes;
+
+
+typedef enum eosBayesDistributionInfoMode {
+ eosBayesDistributionInfoModeGaussian=0
+
+} eosBayesDistributionInfoMode;
+
+typedef struct eosBayesDistributionInfo {
+ float min;
+ float max;
+ float delta;
+
+
+ eosBayesDistributionInfoMode mode;
+
+
+ // For Gaussian
+ float mean;
+ float sigma;
+} eosBayesDistributionInfo;
+
+
+/* eosBayesInit.c */
+// Initialization of eosBays
+extern void leosBayesInit(eosBayes* b, int numDistribution, int numLikelihood, int mode);
+
+extern void eosBayesCondition(FILE* fptIn, eosBayes* d, eosBayesDistributionInfo* llinfo, int mode);
+
+// Initialize Each distribution of eosBayesDistributions
+extern void eosBayesDistributionInit(eosBayesDistribution* d,eosBayesDistributionInfo* info, int mode);
+
+// Initialize probe of Each distribution of eosBayesDistriubutions
+extern void eosBayesDistributionInitialProbabilitySet(eosBayesDistribution* d, eosBayesDistributionInfo* info, int mode);
+
+/* eosBayesEstimation.c */
+extern void eosBayesEstimation(eosBayesDistribution* d, int mode);
+
+/* eosBayesWrite.c */
+extern void eosBayesDistribututionWrite(FILE* fpt, eosBayesDistribution* d, int mode);
+extern void eosBayesPriorWrite(FILE* fpt, eosBayes* d, int mode);
+extern void eosBayesPosterior(FILE* fpt, eosBayes* d, int mode);
+extern void eosBayesLikelihood(FILE* fpt, eosBayes* d, int mode);
+extern void eosBayesWrite(FILE* fpt, eosBayes* d, int mode);
+// FileFormat
+// 0 min0 max0 delta0 n0 out.prior[0].prob[0] ...... prob[n-1]
+// 1 min1 max1 delta1 n1 out.prior[1].prob[0] ...... prob[n-1]
+
+
+
+/* eosBayesRead.c */
+extern void eosBayesDistributionRead(FILE* fpt, eosBayesDistribution* d, int mode);
+extern void eosBayesRead(FILE* fpt, eosBayes* d, int mode);
+
+
+#endif /* EOS_BAYES_H */
+</PRE>
#define EOS_BAYES_H
typedef struct eosBayesDistribution {
+ //char* name;
float min;
float max;
float delta;
int n;
+ float* value;
float* prob;
} eosBayesDistribution;
/* eosBayesInit.c */
// Initialization of eosBays
-extern void eosBayesInit(eosBayes* b, int numDistribution, int numLikelihood, int mode);
+extern void leosBayesInit(eosBayes* b, int numDistribution, int numLikelihood, int mode);
+
+extern void eosBayesCondition(FILE* fptIn, eosBayes* d, eosBayesDistributionInfo* llinfo, int mode);
// Initialize Each distribution of eosBayesDistributions
-extern void eosBayesDistributionInit(eosBayesDistributions* d, float min, float max, float delta, int mode);
+extern void eosBayesDistributionInit(eosBayesDistribution* d,eosBayesDistributionInfo* info, int mode);
// Initialize probe of Each distribution of eosBayesDistriubutions
-extern void eosBayesDistributionInitialProbabilitySet(eosBayesDistribution* d, int mode);
+extern void eosBayesDistributionInitialProbabilitySet(eosBayesDistribution* d, eosBayesDistributionInfo* info, int mode);
/* eosBayesEstimation.c */
extern void eosBayesEstimation(eosBayesDistribution* d, int mode);
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% eosBayesCondition ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : eosBayesCondition
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%eosBayesCondition ver%I%; Date:%D% %Z%";
+
+
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+#include "../inc/eosBayes.h"
+
+#define DEBUG
+#include "genUtil.h"
+#include "String.h"
+
+void eosBayesCondition(FILE* fptIn, eosBayes* d, eosBayesDistributionInfo* llinfo, int mode){
+
+ int i;
+ char s[1024];
+
+ DEBUGPRINT("File read start\n");
+ for(i=0; i<d->numDistribution;i++){
+ // read each of min, max, delta, mode, mean, sigma
+
+ DEBUGPRINT2("%d/%d loop\n",i+1,d->numDistribution);
+ stringGetFromFile(s, "in main", fptIn, stdout, 3);
+
+ llinfo->min = stringGetNthRealData(s, 2," \t");
+ llinfo->max = stringGetNthRealData(s, 3," \t");
+ llinfo->delta = stringGetNthRealData(s, 4," \t");
+ llinfo->mode = stringGetNthIntegerData(s, 5," \t");
+
+ llinfo->mean = stringGetNthRealData(s, 6," \t");
+ llinfo->sigma = stringGetNthRealData(s, 7," \t");
+
+ DEBUGPRINT1("%s\n",s);
+ DEBUGPRINT6("%f %f %f %u %f %f\n",llinfo->min,llinfo->max,llinfo->delta,llinfo->mode,llinfo->mean,llinfo->sigma);
+ eosBayesDistributionInit(&(d->prior[i]),llinfo,0);
+ eosBayesDistributionInitialProbabilitySet(&(d->prior[i]), llinfo, 0);
+ }
+ DEBUGPRINT("eosBayesConditon finish\n")
+
+}
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% eosBayesCondition ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : eosBayesCondition
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%eosBayesCondition ver%I%; Date:%D% %Z%";
+
+
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+#include "../inc/eosBayes.h"
+
+#define DEBUG
+#include "genUtil.h"
+#include "String.h"
+
+void eosBayesCondition(FILE* fptIn, eosBayes* d, eosBayesDistributionInfo* llinfo, int mode){
+
+ int i;
+ char s[1024];
+
+ DEBUGPRINT("File read start\n");
+ for(i=0; i<d->numDistribution;i++){
+ // read each of min, max, delta, mode, mean, sigma
+
+ DEBUGPRINT2("%d/%d loop\n",i+1,d->numDistribution);
+ stringGetFromFile(s, "in main", fptIn, stdout, 3);
+
+ llinfo->min = stringGetNthRealData(s, 2," \t");
+ llinfo->max = stringGetNthRealData(s, 3," \t");
+ llinfo->delta = stringGetNthRealData(s, 4," \t");
+ llinfo->mode = stringGetNthIntegerData(s, 5," \t");
+
+ llinfo->mean = stringGetNthRealData(s, 6," \t");
+ llinfo->sigma = stringGetNthRealData(s, 7," \t");
+
+ DEBUGPRINT("%s\n");
+ DEBUGPRINT6("%f %f %f %u %f %f\n",llinfo->min,llinfo->max,llinfo->delta,llinfo->mode,llinfo->mean,llinfo->sigma);
+ eosBayesDistributionInit(&(d->prior[i]),llinfo,0);
+ eosBayesDistributionInitialProbabilitySet(&(d->prior[i]), llinfo, 0);
+ }
+ DEBUGPRINT("eosBayesConditon finish\n")
+
+}
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% eosBayesDistributionInit ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : eosBayesDistributionInit
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%eosBayesDistributionInit ver%I%; Date:%D% %Z%";
+
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+#include "../inc/eosBayes.h"
+
+
+
+void eosBayesDistributionInit(eosBayesDistribution* d, eosBayesDistributionInfo* info, int mode){
+
+ int i;
+
+ d->min = info->min;
+ d->max = info->max;
+ d->delta = info->delta;
+ d->n = (int)(((info->max-info->min)/info->delta)+0.5);
+
+ d->value = (float*)malloc(sizeof(float)*d->n);
+ d->prob = (float*)malloc(sizeof(float)*d->n);
+
+ for(i=0;i<d->n;i++){
+ d->value[i] = d->min+(d->delta*i);
+ }
+
+ if(mode==0){
+ info->mode = eosBayesDistributionInfoModeGaussian;
+ }
+
+
+}
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% eosBayesDistributionInit ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : eosBayesDistributionInit
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%eosBayesDistributionInit ver%I%; Date:%D% %Z%";
+
+
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% eosBayesDistributionInitialProbabilitySet ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : eosBayesDistributionInitialProbabilitySet
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%eosBayesDistributionInitialProbabilitySet ver%I%; Date:%D% %Z%";
+
+
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+#include <math.h>
+#include "../inc/eosBayes.h"
+
+
+void eosBayesDistributionInitialProbabilitySet(eosBayesDistribution* d, eosBayesDistributionInfo* info, int mode){
+
+ int i;
+ float data;
+
+ switch(info->mode){
+
+ case eosBayesDistributionInfoModeGaussian:
+ fprintf(stderr, "-----Mode Gaussian distribution-----\n");
+ for(i=0;i<d->n;i++){
+ data = info->min + (info->delta*i);
+ d->prob[i] = (1/sqrt(2*M_PI*info->sigma*info->sigma))*exp(-(((data-info->mean)*(data-info->mean))/(2*info->sigma*info->sigma)));
+ }
+ break;
+
+ default:
+ break;
+
+ }
+}
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% eosBayesDistributionInitialProbabilitySet ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : eosBayesDistributionInitialProbabilitySet
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%eosBayesDistributionInitialProbabilitySet ver%I%; Date:%D% %Z%";
+
+
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% eosBayesWrite ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : eosBayesWrite
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%eosBayesWrite ver%I%; Date:%D% %Z%";
+
+
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+#include "../inc/eosBayes.h"
+
+
+void eosBayesDistributionWrite(FILE* fpt, eosBayesDistribution* d, int mode){
+
+ int i;
+
+ switch(mode){
+
+ case 1:
+ fprintf(fpt,"#dist: %f\t%f\t%f\t%d\n",d->min,d->max,d->delta,d->n);
+ for(i=0;i<d->n;i++){
+ fprintf(fpt,"%f\n",d->prob[i]);
+ }
+ fprintf(fpt,"\n");
+
+ break;
+ case 2:
+ break;
+
+ default:
+ fprintf(stderr,"");
+ break;
+
+ }
+
+}
+
+
+void eosBayesPriorWrite(FILE* fpt, eosBayes* d, int mode){
+
+ int i;
+
+ for(i=0;i<d->numDistribution;i++){
+ eosBayesDistributionWrite(fpt,&(d->prior[i]),1);
+ }
+
+
+}
+
+void eosBayesPosteriorWrite(FILE* fpt, eosBayes* d, int mode){
+
+ int i;
+
+ for(i=0;i<d->numDistribution;i++){
+ eosBayesDistributionWrite(fpt,&(d->posterior[i]),1);
+ }
+
+
+}
+
+
+
+void eosBayesLikelihoodWrite(FILE* fpt, eosBayes* d, int mode){
+
+ int i;
+
+ for(i=0;d->numLikelihood;i++){
+ eosBayesDistributionWrite(fpt,&(d->likelihood[i]),2);
+ }
+
+
+}
+
+
+
+void eosBayesWrite(FILE* fpt, eosBayes* d, int mode){
+}
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% eosBayesWrite ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : eosBayesWrite
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%eosBayesWrite ver%I%; Date:%D% %Z%";
+
+
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+#include "../inc/eosBayes.h"
+
+
+void eosBayesDistributionWrite(FILE* fpt, eosBayesDistribution* d, int mode){
+
+ int i;
+
+ switch(mode){
+
+ case 1:
+ fprintf(fpt,"dist: %f\t%f\t%f\t%d\n",d->min,d->max,d->delta,d->n);
+ for(i=0;i<d->n;i++){
+ fprintf(fpt,"%f\n",d->prob[i]);
+ }
+ fprintf(fpt,"\n");
+
+ break;
+ case 2:
+ break;
+
+ default:
+ fprintf(stderr,"");
+ break;
+
+ }
+
+}
+
+
+void eosBayesPriorWrite(FILE* fpt, eosBayes* d, int mode){
+
+ int i;
+
+ for(i=0;i<d->numDistribution;i++){
+ eosBayesDistributionWrite(fpt,&(d->prior[i]),1);
+ }
+
+
+}
+
+void eosBayesPosteriorWrite(FILE* fpt, eosBayes* d, int mode){
+
+ int i;
+
+ for(i=0;i<d->numDistribution;i++){
+ eosBayesDistributionWrite(fpt,&(d->posterior[i]),1);
+ }
+
+
+}
+
+
+
+void eosBayesLikelihoodWrite(FILE* fpt, eosBayes* d, int mode){
+
+ int i;
+
+ for(i=0;d->numLikelihood;i++){
+ eosBayesDistributionWrite(fpt,&(d->likelihood[i]),2);
+ }
+
+
+}
+
+
+
+void eosBayesWrite(FILE* fpt, eosBayes* d, int mode){
+}
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% leosBayesInit ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : leosBayesInit
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%leosBayesInit ver%I%; Date:%D% %Z%";
+
+
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+#include "../inc/eosBayes.h"
+
+
+void leosBayesInit(eosBayes* b, int numDistribution, int numLikelihood, int mode){
+
+ b->numDistribution = numDistribution;
+ b->numLikelihood = numLikelihood;
+
+ b->prior = (eosBayesDistribution*)malloc(sizeof(eosBayesDistribution)*numDistribution);
+ b->posterior = (eosBayesDistribution*)malloc(sizeof(eosBayesDistribution)*numDistribution);
+
+ b->likelihood = (eosBayesDistribution*)malloc(sizeof(eosBayesDistribution)*numLikelihood);
+
+}
--- /dev/null
+/*
+# %M% %Y% %I%
+# The latest update : %G% at %U%
+#
+#%Z% leosBayesInit ver %I%
+#%Z% Created by
+#%Z%
+#%Z% Usage : leosBayesInit
+#%Z% Attention
+#%Z%
+*/
+static char __sccs_id[] = "%Z%leosBayesInit ver%I%; Date:%D% %Z%";
+
+
+#include <stdio.h>
+#include <string.h>
+#include <stdlib.h>
+#include "../inc/eosBayes.h"
+
+
+void leosBayesInit(eosBayes* b, int numDistribution, int numLikelihood, int mode){
+
+ b->prior = (eosBayesDistribution*)malloc(sizeof(eosBayesDistribution)*numDistribution);
+ b->posterior = (eosBayesDistribution*)malloc(sizeof(eosBayesDistribution)*numDistribution);
+
+ b->likelihood = (eosBayesDistribution*)malloc(sizeof(eosBayesDistribution)*numLikelihood);
+
+}
+++ /dev/null
-/Users/tacyas/Eos/src/Config/Template/ToolsHomeTemplate.Dir/Makefile
\ No newline at end of file
--- /dev/null
+include ../Config/Define.inc
+include Config/Define.inc
+include .Source
+
+include Config/Target.inc
eosBayes out;
eosBayesInitInfo info;
eosBayesDistributionInfo llinfo;
- int i;
- char s[1024];
+
init0(&info);
argCheck(&info, argc, argv);
DEBUGPRINT("Program Start\n");
- eosBayesInit(&out, info.numDistribution, info.numLikelihood, info.mode);
+ leosBayesInit(&out, info.numDistribution, info.numLikelihood, info.mode);
// input: info.fptIn
// 0 min0 max0 delta0 mode0 mean0 sigma0
- // ...
- for(i=0; i<info.numDistribution; i++) {
- // read each of min, max, delta, mode, mean, sigma
+ // ...
- stringGetFromFile(s, "in main", info.fptIn, stdout, 0);
- llinfo.min = stringGetNthRealData(s, 2, " \t");
- llinfo.max = stringGetNthReadData(s, 3, " \t");
- //llinfo.delta = delta;
- llinfo.mode = stringGetNthIntegerData(s, 5, " \t");
- //llinfo.mean = mean;
- //llinfo.sigma = sigma;
- eosBayesDistributionInit(&(out.prior[i]), &llinfo, info.mode)
- eosBayesDistributionInitialProbabilitySet(eosBayesDistribution* d, &llinfo, info.mode);
- }
- eosBayesPriorWrite(info.Out, &out, info.mode);
+ eosBayesCondition(info.fptIn, &out, &llinfo, 0);
+
+ eosBayesPriorWrite(info.fptOut, &out, info.mode);
+ DEBUGPRINT("PriorWrite finish\n");
+
exit(EXIT_SUCCESS);
+
}
void
exec:
@echo "----- Execution Check -----"
- ../$(OSTYPE)/$(OBJECTNAME)
+ ../$(OSTYPE)/$(OBJECTNAME) -i data/test.in -o data/test.out2 -n 3 3
@echo "----- Calc check -----"
clean:
--- /dev/null
+0 0 360 2 0 15 10
+1 0 360 2 0 180 60
\ No newline at end of file
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