Rebuild

diff --git a/bin/X86LINUX64/ctfDeterminationFromThonRing b/bin/X86LINUX64/ctfDeterminationFromThonRing
index 9633a67..ed5cebf 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfDetermine b/bin/X86LINUX64/ctfDetermine
index 756882a..fc9d400 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfEnvelopFunction b/bin/X86LINUX64/ctfEnvelopFunction
index 0d2c099..a89ffd9 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfEnvelopFunctionEstimate b/bin/X86LINUX64/ctfEnvelopFunctionEstimate
index 8569252..ebcdedf 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfFunction b/bin/X86LINUX64/ctfFunction
index e63f236..e39a181 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfMultiFunction b/bin/X86LINUX64/ctfMultiFunction
index 5895499..b79eff5 100755 (executable)
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diff --git a/bin/X86LINUX64/ctfWeightMapCreation b/bin/X86LINUX64/ctfWeightMapCreation
index e9d10c4..7317219 100755 (executable)
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diff --git a/bin/X86LINUX64/defocusDeterminationFromThonRing b/bin/X86LINUX64/defocusDeterminationFromThonRing
index a69a211..977769f 100755 (executable)
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diff --git a/bin/X86LINUX64/electronWaveLength b/bin/X86LINUX64/electronWaveLength
index 6dbc90e..871728a 100755 (executable)
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diff --git a/bin/X86LINUX64/llDataAverage b/bin/X86LINUX64/llDataAverage
index 523566a..e8c700c 100755 (executable)
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diff --git a/bin/X86LINUX64/llDataAxisSearch b/bin/X86LINUX64/llDataAxisSearch
index c927414..9e94137 100755 (executable)
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diff --git a/bin/X86LINUX64/llDataCTFCompensate b/bin/X86LINUX64/llDataCTFCompensate
index 97a14cf..55d8b78 100755 (executable)
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diff --git a/bin/X86LINUX64/llDataMultiCTFCompensation b/bin/X86LINUX64/llDataMultiCTFCompensation
index ef758b9..115b85c 100755 (executable)
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diff --git a/bin/X86LINUX64/llExtractCtfinfFileCreate b/bin/X86LINUX64/llExtractCtfinfFileCreate
index a51049b..8e7e8b9 100755 (executable)
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diff --git a/bin/X86LINUX64/llExtractWithLayerSeparation b/bin/X86LINUX64/llExtractWithLayerSeparation
index 01b9285..94ea97b 100755 (executable)
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diff --git a/bin/X86LINUX64/mrc2bild b/bin/X86LINUX64/mrc2bild
new file mode 100755 (executable)
index 0000000..6193f4f
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diff --git a/bin/X86LINUX64/mrc2fld b/bin/X86LINUX64/mrc2fld
index 4a837a8..6a94b94 100755 (executable)
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diff --git a/bin/X86LINUX64/mrc2tiff b/bin/X86LINUX64/mrc2tiff
index b397793..843983c 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageAreaCalc b/bin/X86LINUX64/mrcImageAreaCalc
index 98151de..5d71ae1 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFCompensation b/bin/X86LINUX64/mrcImageCTFCompensation
index c0e9d72..f1d2210 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFDetermination b/bin/X86LINUX64/mrcImageCTFDetermination
index a1bd897..5f6b24d 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFObservation b/bin/X86LINUX64/mrcImageCTFObservation
index 3f1c88c..d897afb 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageCTFSN b/bin/X86LINUX64/mrcImageCTFSN
index ae2abe6..1197637 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageChainCodeCalc b/bin/X86LINUX64/mrcImageChainCodeCalc
index 3f77935..f63927c 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageClusterAnalysis b/bin/X86LINUX64/mrcImageClusterAnalysis
index 1736d9b..0302cc5 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageEdgeCalc b/bin/X86LINUX64/mrcImageEdgeCalc
index e278c78..0415db9 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageFeatureCalc b/bin/X86LINUX64/mrcImageFeatureCalc
new file mode 100755 (executable)
index 0000000..1ee5a05
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diff --git a/bin/X86LINUX64/mrcImageLabeling b/bin/X86LINUX64/mrcImageLabeling
index 98db7b2..f12524c 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageLocalMaximumValuesFind b/bin/X86LINUX64/mrcImageLocalMaximumValuesFind
index 532684f..203b347 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageMontageCreate b/bin/X86LINUX64/mrcImageMontageCreate
index 41f14a8..512be08 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageMultiCTFCompensation b/bin/X86LINUX64/mrcImageMultiCTFCompensation
index c065867..6bfa4d0 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageMultiCTFDetermination b/bin/X86LINUX64/mrcImageMultiCTFDetermination
index 2b0d609..ead1b00 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImagePad b/bin/X86LINUX64/mrcImagePad
index 20cd1c1..f506cdc 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImagePeakSearch b/bin/X86LINUX64/mrcImagePeakSearch
index 3837b10..3ae7776 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImagePerimeterCalc b/bin/X86LINUX64/mrcImagePerimeterCalc
index 72adf0b..7e6ba7b 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageProjection b/bin/X86LINUX64/mrcImageProjection
index 53534bb..301343a 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageROIs b/bin/X86LINUX64/mrcImageROIs
index e26915f..0aea063 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageSectionGet b/bin/X86LINUX64/mrcImageSectionGet
index a66bf67..ef47bb6 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageShapeSearch b/bin/X86LINUX64/mrcImageShapeSearch
index a62a9a8..63c7485 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageSimilarityEstimate b/bin/X86LINUX64/mrcImageSimilarityEstimate
index a20c542..e1ef98c 100755 (executable)
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diff --git a/bin/X86LINUX64/mrcImageSurfaceAreaCalc b/bin/X86LINUX64/mrcImageSurfaceAreaCalc
new file mode 100755 (executable)
index 0000000..095c7bd
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diff --git a/bin/X86LINUX64/mrcImageSurfaceCalc b/bin/X86LINUX64/mrcImageSurfaceCalc
new file mode 100755 (executable)
index 0000000..9cebc3c
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diff --git a/bin/X86LINUX64/pdb2mrc2dWithCTF b/bin/X86LINUX64/pdb2mrc2dWithCTF
index 70c6a6e..51fb2c4 100755 (executable)
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diff --git a/bin/X86LINUX64/pdb2ucd b/bin/X86LINUX64/pdb2ucd
index 343886d..13d08f5 100755 (executable)
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diff --git a/lib/CommandEntry.wish b/lib/CommandEntry.wish
index 3027f1f..896eda9 100644 (file)
--- a/lib/CommandEntry.wish
+++ b/lib/CommandEntry.wish
@@ -4,15 +4,22 @@
 #
 
 #
-#
+# CommandEntry
 #
 proc CommandEntry { name label width command args } {
        set f [ frame $name ]
-       label $name.label -text $label -width $width -anchor w
+       label $name.label -text $label -width [ expr $width * 5] -anchor w 
+       #label $name.label -text $label -width 20 -anchor w
+       #labelframe $name -text $label -labelanchor w
+
+       label $name.space -text " "
        set cmd  { entry $name.entry -relief sunken }
        eval $cmd $args 
-       pack $name.label -side left
-       pack $name.entry -side right -fill x -expand true 
+
+       pack $name.label -side left -expand yes -fill x 
+       #pack $name.space -side left -expand yes -fill x
+       #pack $name
+       pack $name.entry -side left -anchor e
        bind $name.entry <Return> $command 
        return $name.entry
 }
@@ -47,6 +54,7 @@ proc CommandEntryWithSelectionEntrySet { name var } {
 proc CommandEntryWithUpDown { name label width command var delta args } {
        frame $name
        label $name.label -text $label -width $width -anchor w
+       label $name.space -text " "
        eval { entry $name.entry -relief sunken -textvar $var } $args 
 
        button $name.down -text < -command "CommandEntryWithUpDownDown $name $delta; $command " 
@@ -54,7 +62,8 @@ proc CommandEntryWithUpDown { name label width command var delta args } {
 
        eval { entry $name.delta -relief sunken -textvar $delta } $args 
 
-       pack $name.label -side left
+       pack $name.label -side left -expand yes -fill x -anchor w
+       pack $name.space -side left -expand yes -fill x
        pack $name.down $name.up $name.entry $name.delta -side left -fill x -expand true 
 
        bind $name.entry <Return> $command

diff --git a/lib/X86LINUX64/libAI.a b/lib/X86LINUX64/libAI.a
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diff --git a/lib/X86LINUX64/libArray.a b/lib/X86LINUX64/libArray.a
index 22ad388..020d642 100644 (file)
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diff --git a/lib/X86LINUX64/libCluster.a b/lib/X86LINUX64/libCluster.a
index a6f43c0..03f5600 100644 (file)
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diff --git a/lib/X86LINUX64/libContour.a b/lib/X86LINUX64/libContour.a
index 9d9e44b..3e5bba4 100644 (file)
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diff --git a/lib/X86LINUX64/libDCDFile.a b/lib/X86LINUX64/libDCDFile.a
index 7a29311..1e28daf 100644 (file)
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diff --git a/lib/X86LINUX64/libEosObjects.a b/lib/X86LINUX64/libEosObjects.a
index 3cf6b10..66aef8e 100644 (file)
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diff --git a/lib/X86LINUX64/libEosObjects.so b/lib/X86LINUX64/libEosObjects.so
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diff --git a/lib/X86LINUX64/libTclTk.so b/lib/X86LINUX64/libTclTk.so
index 87a32fe..978d468 100644 (file)
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diff --git a/lib/X86LINUX64/libavsFile.a b/lib/X86LINUX64/libavsFile.a
index e8bdab2..c21940f 100644 (file)
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diff --git a/lib/X86LINUX64/libavsFile.so b/lib/X86LINUX64/libavsFile.so
index 5d8b9c0..896438c 100644 (file)
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diff --git a/lib/X86LINUX64/libbildFile.a b/lib/X86LINUX64/libbildFile.a
new file mode 100644 (file)
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diff --git a/lib/X86LINUX64/libbildFile.so b/lib/X86LINUX64/libbildFile.so
new file mode 100644 (file)
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diff --git a/lib/X86LINUX64/libbmpFile.a b/lib/X86LINUX64/libbmpFile.a
index d14c77e..d96ff8c 100644 (file)
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diff --git a/lib/X86LINUX64/libctfInfo.a b/lib/X86LINUX64/libctfInfo.a
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diff --git a/lib/X86LINUX64/libctfInfo.so b/lib/X86LINUX64/libctfInfo.so
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diff --git a/lib/X86LINUX64/libdmFile.a b/lib/X86LINUX64/libdmFile.a
index 031db17..c73522c 100644 (file)
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diff --git a/lib/X86LINUX64/libllData.a b/lib/X86LINUX64/libllData.a
index 20c5870..ff2ee00 100644 (file)
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diff --git a/lib/X86LINUX64/libltlgData.a b/lib/X86LINUX64/libltlgData.a
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diff --git a/lib/X86LINUX64/libpdbFile.a b/lib/X86LINUX64/libpdbFile.a
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diff --git a/lib/X86LINUX64/libpsFile.a b/lib/X86LINUX64/libpsFile.a
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diff --git a/lib/X86LINUX64/libsimulation.a b/lib/X86LINUX64/libsimulation.a
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diff --git a/lib/X86LINUX64/libtransform.a b/lib/X86LINUX64/libtransform.a
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diff --git a/lib/X86LINUX64/shared/avsFileInit.sharedo b/lib/X86LINUX64/shared/avsFileInit.sharedo
index b2d954b..9de5193 100644 (file)
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diff --git a/lib/X86LINUX64/shared/lmrc2bild.sharedo b/lib/X86LINUX64/shared/lmrc2bild.sharedo
new file mode 100644 (file)
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diff --git a/lib/X86LINUX64/shared/lmrcImageClusterAnalysis.sharedo b/lib/X86LINUX64/shared/lmrcImageClusterAnalysis.sharedo
index 69c2213..bfa8670 100644 (file)
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diff --git a/lib/X86LINUX64/shared/lmrcImageEdge.sharedo b/lib/X86LINUX64/shared/lmrcImageEdge.sharedo
index d46d2e2..5e35448 100644 (file)
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diff --git a/lib/X86LINUX64/shared/lmrcImageFeatureCalc.sharedo b/lib/X86LINUX64/shared/lmrcImageFeatureCalc.sharedo
index a644dcb..e11f155 100644 (file)
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diff --git a/lib/X86LINUX64/shared/lmrcImageLabeling.sharedo b/lib/X86LINUX64/shared/lmrcImageLabeling.sharedo
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diff --git a/lib/X86LINUX64/shared/lmrcImageLocalMaximumValuesFind.sharedo b/lib/X86LINUX64/shared/lmrcImageLocalMaximumValuesFind.sharedo
new file mode 100644 (file)
index 0000000..076d9eb
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diff --git a/lib/X86LINUX64/shared/lmrcImageProjection.sharedo b/lib/X86LINUX64/shared/lmrcImageProjection.sharedo
index fa4b7e7..63843b5 100644 (file)
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diff --git a/lib/X86LINUX64/shared/lmrcImageSurfaceAreaCalc.sharedo b/lib/X86LINUX64/shared/lmrcImageSurfaceAreaCalc.sharedo
new file mode 100644 (file)
index 0000000..4501834
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diff --git a/lib/X86LINUX64/shared/lmrcImageTranspose.sharedo b/lib/X86LINUX64/shared/lmrcImageTranspose.sharedo
index e332332..c0104b8 100644 (file)
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diff --git a/lib/X86LINUX64/shared/powerspectraTangentLine.sharedo b/lib/X86LINUX64/shared/powerspectraTangentLine.sharedo
index 2738a7c..6b86d91 100644 (file)
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diff --git a/lib/X86LINUX64/shared/tkctfInfo.sharedo b/lib/X86LINUX64/shared/tkctfInfo.sharedo
index 7160d27..fc765c1 100644 (file)
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diff --git a/lib/ctfInfo.wish b/lib/ctfInfo.wish
index f6309ed..c9ebf2d 100644 (file)
--- a/lib/ctfInfo.wish
+++ b/lib/ctfInfo.wish
@@ -16,7 +16,7 @@ proc Init { { mrc __null__ } } {
        if { $mrc != "__null__" } { 
                # New Object 
         array set mrcImage $mrc 
-               puts "name:  $mrcImage(filename)"
+               #puts "name:  $mrcImage(filename)"
                if [ info exists mrcImage(filename) ] {
                        # Set New mrcImage
                        set filename $mrcImage(filename)
@@ -60,7 +60,9 @@ proc Init { { mrc __null__ } } {
 
        # Molecular Envelope for signal
        #Elastic
-       set ctfInfo(.defctfinfo) "./.DefCTFInfo"
+       set ctfInfo(.defctfinfo)    "./.DefCTFInfo"
+       set ctfInfo(.defdir)        "~/.Eos"
+       set ctfInfo(.defdirctfinfo) "~/.Eos/DefCTFInfo"
        set ctfInfo(whichMolec)         Gauss
        set ctfInfo(.molcEnvTable)      "./carbon.table"
     set ctfInfo(MolcEnv)     8.0    
@@ -238,12 +240,20 @@ proc Init { { mrc __null__ } } {
        set ctfInfo(.ctfinfoMode) "Every"
        #puts "ctfinfoMode: $ctfInfo(.ctfinfoMode) "
 
+
+       if [ file exists $ctfInfo(.defdir) ] {
+               #       
+       } else {
+               file mkdir $ctfInfo(.defdir) 
+       }
        if [ file exists $ctfInfo(.ctfinfo) ] {
                ctfInfoLoad 
        } elseif [ file exists $ctfInfo(.defctfinfo) ] {
                ctfInfoLoad $ctfInfo(.defctfinfo)
+       } elseif [ file exists $ctfInfo(.defdirctfinfo) ] {
+               ctfInfoLoad $ctfInfo(.defdirctfinfo)
        }
-
+       
        #
     # Data Taking (Scattering)
        #
@@ -418,16 +428,20 @@ proc ctfInfoSaveAsPS { } {
 # 
 # Save
 #
-proc ctfInfoSave { { filename __null__ } } {
+proc ctfInfoSave { { filename __null__ } { ctfinfomode __null__  } } {
        variable ctfInfo
 
-       if { $filename != "__null__" } {
-               set ctfInfo(.ctfinfo) $filename
+       if { $filename == "__null__" } {
+               set filename $ctfInfo(.ctfinfo) 
        }
-       #puts $ctfInfo(.ctfinfo) 
-       set fpt [ open  $ctfInfo(.ctfinfo) a 0600 ]
+       #puts $filename
+       set fpt [ open  $filename a 0600 ]
 
-       switch $ctfInfo(.ctfinfoMode)  {
+       if { $ctfinfomode == "__null__" } {
+               set ctfinfomode $ctfInfo(.ctfinfoMode) 
+       }
+
+       switch $ctfinfomode {
                Every {
                        foreach { name value } [ array get ctfInfo ] {
                                if { $name == "filename" || $name=="mrc" || $name=="" } {
@@ -446,36 +460,47 @@ proc ctfInfoSave { { filename __null__ } } {
                        }
                }       
                Main {
-                       puts $fpt "defocus:       $ctfInfo(defocus)"
-                       puts $fpt "defocus2D0:    $ctfInfo(defocus2D0)"
-                       puts $fpt "defocus2D1:    $ctfInfo(defocus2D1)"
-                       puts $fpt "defocus0axis:  $ctfInfo(defocus0axis)"
-                       puts $fpt "numDivision:   $ctfInfo(numDivision)"
-                       puts $fpt "AoverP:        $ctfInfo(AoverP)"
-                       puts $fpt "kV:            $ctfInfo(kV)"
-                       puts $fpt "Cs:            $ctfInfo(Cs)"
-                       puts $fpt "Cc:            $ctfInfo(Cc)"
-                       puts $fpt "Ai:            $ctfInfo(Ai)"
-                       puts $fpt "I:             $ctfInfo(I)"
-                       puts $fpt "SN:            $ctfInfo(SN)"
-                       puts $fpt "SN2:           $ctfInfo(SN2)"
-                       puts $fpt "Isignal:       $ctfInfo(Isignal)"
-                       puts $fpt "Inoise:        $ctfInfo(Inoise)"
-                       puts $fpt "Inoise2:       $ctfInfo(Inoise2)"
-                       puts $fpt "whichMTF:      $ctfInfo(whichMTF)"
-                       puts $fpt "MTF:           $ctfInfo(MTF)"
-                       puts $fpt "MTF2:          $ctfInfo(MTF2)"
-                       puts $fpt "MTF2Weight:    $ctfInfo(MTF2Weight)"
-                       puts $fpt "MolcEnv:       $ctfInfo(MolcEnv)"
-                       puts $fpt "Magnification: $ctfInfo(Magnification)"
-                       puts $fpt "flagCTFPower:  $ctfInfo(flagCTFPower)"
-                       puts $fpt "BofVibration:  $ctfInfo(BofVibration)"
-                       puts $fpt "flagVibration: $ctfInfo(flagVibration)"
-                       puts $fpt "VibrationMode: $ctfInfo(VibrationMode)"
-                       puts $fpt "Imax:          $ctfInfo(Imax)"
-                       puts $fpt "Imin:          $ctfInfo(Imin)"
-                       puts $fpt "Rmax:          $ctfInfo(Rmax)"
-                       puts $fpt "Rmin:          $ctfInfo(Rmin)"
+                       foreach { name } { defocus defocus2D0 defocus2D1 defocus0axis 
+                                                          numDivision
+                                                          AoverP kV Cs Cc Ai 
+                                                          I SN SN2
+                                                          Isignal Inoise Inoise2 
+                                                          whichMTF MTF     MTF2   MolcEnv
+                                                          Magnification
+                                                          flagCTFPower BofVibration flagVibration VibrationMode
+                                                          Imax Imin Rmax Rmin 
+                                                          }  {
+                               puts $fpt "[subst $name]:  [ subst $ctfInfo([subst $name])] "
+                       }
+               }
+               Control {
+                       foreach { name } { defocus ddefocus
+                                                          defocus2D0 ddefocus2D0  
+                                                          defocus2D1 ddefocus2D1  
+                                                          defocus0axis ddefocus0axis
+                                                          numDivision
+                                                          AoverP     dAoverP
+                                                          kV Cs Cc Ai 
+                                                          I SN SN2
+                                                          Isignal dIsignal
+                                                          Inoise  dInoise
+                                                          Inoise2 dInoise2
+                                                          whichMTF
+                                                          MTF     dMTF
+                                                          MTF2    dMTF2
+                                                          MolcEnv
+                                                          Magnification
+                                                          flagCTFPower
+                                                          BofVibration
+                                                          flagVibration
+                                                          VibrationMode
+                                                          Imax dImax
+                                                          Imin dImin
+                                                          Rmax dRmax
+                                                          Rmin dRmin
+                                                          }  {
+                               puts $fpt "[subst $name]:  [ subst $ctfInfo([subst $name])] "
+                       }
                }
        }
        if [ info exists fpt ] { 
@@ -493,7 +518,7 @@ proc ctfInfoLoad { { filename __null__ } } {
 
        if { $filename != "__null__"  } {
                if [ file exists $filename ] {
-                       puts $filename 
+                       #puts $filename 
                        set fpt [ open $filename r ]
                } else {
                        puts "No such file: $filename"
@@ -501,13 +526,13 @@ proc ctfInfoLoad { { filename __null__ } } {
                }
        } else {
                if [ info exists ctfInfo ] {
-                       puts "ctfInfo exists" 
-                       puts $ctfInfo(DEBUGCOMMENT)
+                       puts "Use previous ctfInfo: $ctfInfo(.ctfinfo)"
+                       #puts $ctfInfo(DEBUGCOMMENT)
                } else {
                        puts "ctfInfo does not exist" 
                        return
                }
-               puts $ctfInfo(.ctfinfo) 
+               #puts $ctfInfo(.ctfinfo) 
                set fpt [ open  $ctfInfo(.ctfinfo) r ]
        }
 

diff --git a/lib/tclUtil.wish b/lib/tclUtil.wish
index 1cac1d5..62938ca 100644 (file)
--- a/lib/tclUtil.wish
+++ b/lib/tclUtil.wish
@@ -1,3 +1,11 @@
 proc NotSupportedCommand { } {
        puts stderr "Not supported command"
 }
+
+proc debugPrint { s { mode 0 } } {
+       if { $mode == 1} {
+               puts $s; flush stdout
+       } else {
+
+       }
+}

diff --git a/src/Objects/DataExpress/Contour/src/X86LINUX64/libContour.a b/src/Objects/DataExpress/Contour/src/X86LINUX64/libContour.a
index 9d9e44b..3e5bba4 100644 (file)
Binary files a/src/Objects/DataExpress/Contour/src/X86LINUX64/libContour.a and b/src/Objects/DataExpress/Contour/src/X86LINUX64/libContour.a differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.so b/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.so
index 87a32fe..978d468 100755 (executable)
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.so and b/src/Objects/DataExpress/TclTk/src/X86LINUX64/libTclTk.so differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.debugo b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.debugo
deleted file mode 100644 (file)
index c8627e2..0000000
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.debugo and /dev/null differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.o b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.o
deleted file mode 100644 (file)
index 9d856e9..0000000
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.o and /dev/null differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.sharedo b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.sharedo
deleted file mode 100644 (file)
index d8f0ee2..0000000
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtMRC.sharedo and /dev/null differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.debugo b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.debugo
deleted file mode 100644 (file)
index 649359a..0000000
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.debugo and /dev/null differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.o b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.o
deleted file mode 100644 (file)
index 8761dae..0000000
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.o and /dev/null differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.sharedo b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.sharedo
deleted file mode 100644 (file)
index a0a2bf7..0000000
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkImgFmtlargeIP.sharedo and /dev/null differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.debugo b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.debugo
index 079a23d..5c7cbb9 100644 (file)
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.debugo and b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.debugo differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.o b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.o
index 26a90b8..554f29c 100644 (file)
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.o and b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.o differ

diff --git a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.sharedo b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.sharedo
index 7160d27..fc765c1 100644 (file)
Binary files a/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.sharedo and b/src/Objects/DataExpress/TclTk/src/X86LINUX64/tkctfInfo.sharedo differ

diff --git a/src/Objects/DataExpress/avsFile/src/X86LINUX64/avsFileInit.debugo b/src/Objects/DataExpress/avsFile/src/X86LINUX64/avsFileInit.debugo
index 971c854..c3045b9 100644 (file)
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diff --git a/src/Objects/DataExpress/avsFile/src/X86LINUX64/avsFileInit.o b/src/Objects/DataExpress/avsFile/src/X86LINUX64/avsFileInit.o
index d0504ee..320806c 100644 (file)
Binary files a/src/Objects/DataExpress/avsFile/src/X86LINUX64/avsFileInit.o and b/src/Objects/DataExpress/avsFile/src/X86LINUX64/avsFileInit.o differ

diff --git a/src/Objects/DataExpress/avsFile/src/X86LINUX64/avsFileInit.sharedo b/src/Objects/DataExpress/avsFile/src/X86LINUX64/avsFileInit.sharedo
index b2d954b..9de5193 100644 (file)
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diff --git a/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.a b/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.a
index e8bdab2..c21940f 100644 (file)
Binary files a/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.a and b/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.a differ

diff --git a/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.debug.a b/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.debug.a
index 847f12e..d597cf1 100644 (file)
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diff --git a/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.so b/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.so
index 5d8b9c0..896438c 100755 (executable)
Binary files a/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.so and b/src/Objects/DataExpress/avsFile/src/X86LINUX64/libavsFile.so differ

diff --git a/src/Objects/DataExpress/psFile/src/X86LINUX64/libpsFile.a b/src/Objects/DataExpress/psFile/src/X86LINUX64/libpsFile.a
index 3ab1713..95e418a 100644 (file)
Binary files a/src/Objects/DataExpress/psFile/src/X86LINUX64/libpsFile.a and b/src/Objects/DataExpress/psFile/src/X86LINUX64/libpsFile.a differ

diff --git a/src/Objects/DataManip/DCDFile/src/X86LINUX64/libDCDFile.a b/src/Objects/DataManip/DCDFile/src/X86LINUX64/libDCDFile.a
index 7a29311..1e28daf 100644 (file)
Binary files a/src/Objects/DataManip/DCDFile/src/X86LINUX64/libDCDFile.a and b/src/Objects/DataManip/DCDFile/src/X86LINUX64/libDCDFile.a differ

diff --git a/src/Objects/DataManip/MATH/src/X86LINUX64/eosBessel.c b/src/Objects/DataManip/MATH/src/X86LINUX64/eosBessel.c
new file mode 120000 (symlink)
index 0000000..573a56d
--- /dev/null
+++ b/src/Objects/DataManip/MATH/src/X86LINUX64/eosBessel.c
@@ -0,0 +1 @@
+../eosBessel.c
\ No newline at end of file

diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/.Depend b/src/Objects/DataManip/bildFile/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..07f9c00
--- /dev/null
+++ b/src/Objects/DataManip/bildFile/src/X86LINUX64/.Depend
@@ -0,0 +1,26 @@
+X86LINUX64/lmrc2bild.o:lmrc2bild.o
+lmrc2bild.o: lmrc2bild.c ../inc/bildFile.h /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /home/people/tacyas/Eos/include/mrcImage.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h /home/people/tacyas/Eos/include/genUtil.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h

diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/.Source b/src/Objects/DataManip/bildFile/src/X86LINUX64/.Source
new file mode 100644 (file)
index 0000000..d50eea2
--- /dev/null
+++ b/src/Objects/DataManip/bildFile/src/X86LINUX64/.Source
@@ -0,0 +1,28 @@
+SRC = \
+lmrc2bild.c \
+
+OBJ = \
+lmrc2bild.o \
+
+SHAREDOBJ = \
+lmrc2bild.sharedo \
+
+REALOBJ = \
+X86LINUX64/lmrc2bild.o \
+
+REALSHAREDOBJ = \
+X86LINUX64/lmrc2bild.sharedo \
+
+OBJDEBUG = \
+lmrc2bild.debugo \
+
+REALOBJDEBUG = \
+X86LINUX64/lmrc2bild.debugo \
+
+OBJCUDAGDB = \
+lmrc2bild.cudagdb.o \
+
+REALOBJCUDAGDB = \
+X86LINUX64/lmrc2bild.cudagdb.o \
+
+

diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/Makefile b/src/Objects/DataManip/bildFile/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..bdf6a4a
--- /dev/null
+++ b/src/Objects/DataManip/bildFile/src/X86LINUX64/Makefile
@@ -0,0 +1,36 @@
+SHELL=/bin/ksh
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineObject.inc
+
+include .Source
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/.CHeader
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/.CCHeader
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/src/.Wish
+
+LIBNAME=lib$(OBJECTNAME).a
+SHAREDLIB=lib$(OBJECTNAME).so
+LIBNAMEDEBUG=lib$(OBJECTNAME).debug.a
+LIBNAMECUDAGDB=lib$(OBJECTNAME).cudagdb.a
+
+$(LIBNAME): $(OBJ)
+       @echo LIBNAME:$(LIBNAME)
+       $(AR) rs $(LIBNAME) $(OBJ)
+
+$(SHAREDLIB): $(SHAREDOBJ)
+       @COMPILEDOBJ=`ls $(SHAREDOBJ)` ; echo "#### Compiled Objects"; echo $${COMPILEDOBJ};  echo "################"; \
+       COMMAND="$(SHARED) $(SHAREDLIB) $${COMPILEDOBJ}" ; echo $${COMMAND}; $${COMMAND} 
+
+debug: $(LIBNAMEDEBUG) $(LIBNAMECUDAGDB)
+
+$(LIBNAMEDEBUG): $(OBJDEBUG)
+       @echo LIBNAME:$(LIBNAMEDEBUG)
+       $(AR) rs $(LIBNAMEDEBUG) $(OBJDEBUG)
+
+$(LIBNAMECUDAGDB): $(OBJCUDAGDB)
+       @echo LIBNAME:$(LIBNAMECUDAGDB)
+       $(AR) rs $(LIBNAMECUDAGDB) $(OBJCUDAGDB)
+
+include .Depend
+

diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/X86LINUX64 b/src/Objects/DataManip/bildFile/src/X86LINUX64/X86LINUX64
new file mode 120000 (symlink)
index 0000000..8d9189c
--- /dev/null
+++ b/src/Objects/DataManip/bildFile/src/X86LINUX64/X86LINUX64
@@ -0,0 +1 @@
+../../../../../hostdepend/X86LINUX64/src/Objects/DataManip/bildFile/src/X86LINUX64
\ No newline at end of file

diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/libbildFile.a b/src/Objects/DataManip/bildFile/src/X86LINUX64/libbildFile.a
new file mode 100644 (file)
index 0000000..44affb5
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diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/libbildFile.debug.a b/src/Objects/DataManip/bildFile/src/X86LINUX64/libbildFile.debug.a
new file mode 100644 (file)
index 0000000..a85b427
Binary files /dev/null and b/src/Objects/DataManip/bildFile/src/X86LINUX64/libbildFile.debug.a differ

diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/libbildFile.so b/src/Objects/DataManip/bildFile/src/X86LINUX64/libbildFile.so
new file mode 100755 (executable)
index 0000000..1660e47
Binary files /dev/null and b/src/Objects/DataManip/bildFile/src/X86LINUX64/libbildFile.so differ

diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/lmrc2bild.debugo b/src/Objects/DataManip/bildFile/src/X86LINUX64/lmrc2bild.debugo
new file mode 100644 (file)
index 0000000..f408476
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diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/lmrc2bild.o b/src/Objects/DataManip/bildFile/src/X86LINUX64/lmrc2bild.o
new file mode 100644 (file)
index 0000000..2542cef
Binary files /dev/null and b/src/Objects/DataManip/bildFile/src/X86LINUX64/lmrc2bild.o differ

diff --git a/src/Objects/DataManip/bildFile/src/X86LINUX64/lmrc2bild.sharedo b/src/Objects/DataManip/bildFile/src/X86LINUX64/lmrc2bild.sharedo
new file mode 100644 (file)
index 0000000..88d1ab8
Binary files /dev/null and b/src/Objects/DataManip/bildFile/src/X86LINUX64/lmrc2bild.sharedo differ

diff --git a/src/Objects/DataManip/bmpFile/src/X86LINUX64/libbmpFile.a b/src/Objects/DataManip/bmpFile/src/X86LINUX64/libbmpFile.a
index d14c77e..d96ff8c 100644 (file)
Binary files a/src/Objects/DataManip/bmpFile/src/X86LINUX64/libbmpFile.a and b/src/Objects/DataManip/bmpFile/src/X86LINUX64/libbmpFile.a differ

diff --git a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/ctfFunction.o b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/ctfFunction.o
index e89ce1d..3ced88c 100644 (file)
Binary files a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/ctfFunction.o and b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/ctfFunction.o differ

diff --git a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.a b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.a
index 512d4d7..c85062c 100644 (file)
Binary files a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.a and b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.a differ

diff --git a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.debug.a b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.debug.a
index 8817293..0e4e5a4 100644 (file)
Binary files a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.debug.a and b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.debug.a differ

diff --git a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.so b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.so
index 84aed90..8509e20 100755 (executable)
Binary files a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.so and b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/libctfInfo.so differ

diff --git a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.debugo b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.debugo
index 96745a2..a5c1728 100644 (file)
Binary files a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.debugo and b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.debugo differ

diff --git a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.o b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.o
index 7b077b0..ac71a7b 100644 (file)
Binary files a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.o and b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.o differ

diff --git a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.sharedo b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.sharedo
index 2738a7c..6b86d91 100644 (file)
Binary files a/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.sharedo and b/src/Objects/DataManip/ctfInfo/src/X86LINUX64/powerspectraTangentLine.sharedo differ

diff --git a/src/Objects/DataManip/dmFile/src/X86LINUX64/libdmFile.a b/src/Objects/DataManip/dmFile/src/X86LINUX64/libdmFile.a
index 031db17..c73522c 100644 (file)
Binary files a/src/Objects/DataManip/dmFile/src/X86LINUX64/libdmFile.a and b/src/Objects/DataManip/dmFile/src/X86LINUX64/libdmFile.a differ

diff --git a/src/Objects/DataManip/llData/src/X86LINUX64/libllData.a b/src/Objects/DataManip/llData/src/X86LINUX64/libllData.a
index 20c5870..ff2ee00 100644 (file)
Binary files a/src/Objects/DataManip/llData/src/X86LINUX64/libllData.a and b/src/Objects/DataManip/llData/src/X86LINUX64/libllData.a differ

diff --git a/src/Objects/DataManip/ltlgData/src/X86LINUX64/libltlgData.a b/src/Objects/DataManip/ltlgData/src/X86LINUX64/libltlgData.a
index 0804ab7..c6836ba 100644 (file)
Binary files a/src/Objects/DataManip/ltlgData/src/X86LINUX64/libltlgData.a and b/src/Objects/DataManip/ltlgData/src/X86LINUX64/libltlgData.a differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Depend b/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Depend
index 49af179..8e430f2 100644 (file)
--- a/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Depend
+++ b/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Depend
@@ -63,6 +63,7 @@ X86LINUX64/lmrcImageHighPassFilter.o:lmrcImageHighPassFilter.o
 X86LINUX64/lmrcImageHighlighting.o:lmrcImageHighlighting.o
 X86LINUX64/lmrcImageHoughTransform.o:lmrcImageHoughTransform.o
 X86LINUX64/lmrcImageLabeling.o:lmrcImageLabeling.o
+X86LINUX64/lmrcImageLocalMaximumValuesFind.o:lmrcImageLocalMaximumValuesFind.o
 X86LINUX64/lmrcImageLogicalOperation.o:lmrcImageLogicalOperation.o
 X86LINUX64/lmrcImageLowPassFilter.o:lmrcImageLowPassFilter.o
 X86LINUX64/lmrcImageMasking.o:lmrcImageMasking.o
@@ -120,6 +121,7 @@ X86LINUX64/lmrcImageStack.o:lmrcImageStack.o
 X86LINUX64/lmrcImageStudentCalculate.o:lmrcImageStudentCalculate.o
 X86LINUX64/lmrcImageSubtractionCalc.o:lmrcImageSubtractionCalc.o
 X86LINUX64/lmrcImageSummationCalculate.o:lmrcImageSummationCalculate.o
+X86LINUX64/lmrcImageSurfaceAreaCalc.o:lmrcImageSurfaceAreaCalc.o
 X86LINUX64/lmrcImageSymmetryFind.o:lmrcImageSymmetryFind.o
 X86LINUX64/lmrcImageTfunction.o:lmrcImageTfunction.o
 X86LINUX64/lmrcImageToneReversal.o:lmrcImageToneReversal.o
@@ -1584,20 +1586,20 @@ lmrcImageEdge.o: lmrcImageEdge.c /usr/include/stdio.h \
  /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
  /usr/include/bits/select.h /usr/include/bits/sigset.h \
  /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
- /usr/include/bits/pthreadtypes.h /usr/include/alloca.h lmrcImageEdge.h \
- ../inc/mrcImage.h /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/xlocale.h /usr/include/math.h /usr/include/bits/huge_val.h \
  /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
  /usr/include/bits/inf.h /usr/include/bits/nan.h \
  /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
- /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
- /usr/include/xlocale.h /usr/include/values.h \
+ /usr/include/values.h \
  /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
  /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
  /usr/include/limits.h /usr/include/bits/posix1_lim.h \
  /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
  /usr/include/bits/posix2_lim.h \
- /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
- /home/people/tacyas/Eos/include/Matrix3D.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h lmrcImageEdge.h \
+ ../inc/mrcImage.h /home/people/tacyas/Eos/include/Matrix3D.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h \
  /home/people/tacyas/Eos/include/ctfInfo.h \
@@ -2262,6 +2264,40 @@ lmrcImageLabeling.o: lmrcImageLabeling.c \
  /home/people/tacyas/Eos/include/Array.h \
  /home/people/tacyas/Eos/include/ctfInfo.h \
  /home/people/tacyas/Eos/include/Vector.h
+lmrcImageLocalMaximumValuesFind.o: lmrcImageLocalMaximumValuesFind.c \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/xlocale.h /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
+ /usr/include/bits/inf.h /usr/include/bits/nan.h \
+ /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h lmrcImageLocal.h \
+ /usr/include/stdio.h /usr/include/bits/types.h \
+ /usr/include/bits/typesizes.h /usr/include/libio.h \
+ /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/mrcImage.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h
 lmrcImageLogicalOperation.o: lmrcImageLogicalOperation.c \
  /usr/include/stdio.h /usr/include/features.h /usr/include/sys/cdefs.h \
  /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
@@ -4076,6 +4112,41 @@ lmrcImageSummationCalculate.o: lmrcImageSummationCalculate.c \
  /home/people/tacyas/Eos/include/Array.h \
  /home/people/tacyas/Eos/include/ctfInfo.h \
  /home/people/tacyas/Eos/include/Vector.h
+lmrcImageSurfaceAreaCalc.o: lmrcImageSurfaceAreaCalc.c \
+ /home/people/tacyas/Eos/include/Memory.h /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h /usr/include/stdlib.h \
+ /usr/include/bits/waitflags.h /usr/include/bits/waitstatus.h \
+ /usr/include/endian.h /usr/include/bits/endian.h \
+ /usr/include/bits/byteswap.h /usr/include/sys/types.h \
+ /usr/include/time.h /usr/include/sys/select.h /usr/include/bits/select.h \
+ /usr/include/bits/sigset.h /usr/include/bits/time.h \
+ /usr/include/sys/sysmacros.h /usr/include/bits/pthreadtypes.h \
+ /usr/include/alloca.h lmrcImageFeatureCalc.h lmrcImageCalcArea.h \
+ ../inc/mrcImage.h /usr/include/math.h /usr/include/bits/huge_val.h \
+ /usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
+ /usr/include/bits/inf.h /usr/include/bits/nan.h \
+ /usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/string.h \
+ /usr/include/xlocale.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/Vector.h lmrcImageLabeling.h \
+ lmrcImageEdge.h
 lmrcImageSymmetryFind.o: lmrcImageSymmetryFind.c /usr/include/stdio.h \
  /usr/include/features.h /usr/include/sys/cdefs.h \
  /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Source b/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Source
index bc8abdf..fe81f38 100644 (file)
--- a/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Source
+++ b/src/Objects/DataManip/mrcImage/src/X86LINUX64/.Source
@@ -64,6 +64,7 @@ lmrcImageHighPassFilter.c \
 lmrcImageHighlighting.c \
 lmrcImageHoughTransform.c \
 lmrcImageLabeling.c \
+lmrcImageLocalMaximumValuesFind.c \
 lmrcImageLogicalOperation.c \
 lmrcImageLowPassFilter.c \
 lmrcImageMasking.c \
@@ -121,6 +122,7 @@ lmrcImageStack.c \
 lmrcImageStudentCalculate.c \
 lmrcImageSubtractionCalc.c \
 lmrcImageSummationCalculate.c \
+lmrcImageSurfaceAreaCalc.c \
 lmrcImageSymmetryFind.c \
 lmrcImageTfunction.c \
 lmrcImageToneReversal.c \
@@ -238,6 +240,7 @@ lmrcImageHighPassFilter.o \
 lmrcImageHighlighting.o \
 lmrcImageHoughTransform.o \
 lmrcImageLabeling.o \
+lmrcImageLocalMaximumValuesFind.o \
 lmrcImageLogicalOperation.o \
 lmrcImageLowPassFilter.o \
 lmrcImageMasking.o \
@@ -295,6 +298,7 @@ lmrcImageStack.o \
 lmrcImageStudentCalculate.o \
 lmrcImageSubtractionCalc.o \
 lmrcImageSummationCalculate.o \
+lmrcImageSurfaceAreaCalc.o \
 lmrcImageSymmetryFind.o \
 lmrcImageTfunction.o \
 lmrcImageToneReversal.o \
@@ -412,6 +416,7 @@ lmrcImageHighPassFilter.sharedo \
 lmrcImageHighlighting.sharedo \
 lmrcImageHoughTransform.sharedo \
 lmrcImageLabeling.sharedo \
+lmrcImageLocalMaximumValuesFind.sharedo \
 lmrcImageLogicalOperation.sharedo \
 lmrcImageLowPassFilter.sharedo \
 lmrcImageMasking.sharedo \
@@ -469,6 +474,7 @@ lmrcImageStack.sharedo \
 lmrcImageStudentCalculate.sharedo \
 lmrcImageSubtractionCalc.sharedo \
 lmrcImageSummationCalculate.sharedo \
+lmrcImageSurfaceAreaCalc.sharedo \
 lmrcImageSymmetryFind.sharedo \
 lmrcImageTfunction.sharedo \
 lmrcImageToneReversal.sharedo \
@@ -586,6 +592,7 @@ X86LINUX64/lmrcImageHighPassFilter.o \
 X86LINUX64/lmrcImageHighlighting.o \
 X86LINUX64/lmrcImageHoughTransform.o \
 X86LINUX64/lmrcImageLabeling.o \
+X86LINUX64/lmrcImageLocalMaximumValuesFind.o \
 X86LINUX64/lmrcImageLogicalOperation.o \
 X86LINUX64/lmrcImageLowPassFilter.o \
 X86LINUX64/lmrcImageMasking.o \
@@ -643,6 +650,7 @@ X86LINUX64/lmrcImageStack.o \
 X86LINUX64/lmrcImageStudentCalculate.o \
 X86LINUX64/lmrcImageSubtractionCalc.o \
 X86LINUX64/lmrcImageSummationCalculate.o \
+X86LINUX64/lmrcImageSurfaceAreaCalc.o \
 X86LINUX64/lmrcImageSymmetryFind.o \
 X86LINUX64/lmrcImageTfunction.o \
 X86LINUX64/lmrcImageToneReversal.o \
@@ -760,6 +768,7 @@ X86LINUX64/lmrcImageHighPassFilter.sharedo \
 X86LINUX64/lmrcImageHighlighting.sharedo \
 X86LINUX64/lmrcImageHoughTransform.sharedo \
 X86LINUX64/lmrcImageLabeling.sharedo \
+X86LINUX64/lmrcImageLocalMaximumValuesFind.sharedo \
 X86LINUX64/lmrcImageLogicalOperation.sharedo \
 X86LINUX64/lmrcImageLowPassFilter.sharedo \
 X86LINUX64/lmrcImageMasking.sharedo \
@@ -817,6 +826,7 @@ X86LINUX64/lmrcImageStack.sharedo \
 X86LINUX64/lmrcImageStudentCalculate.sharedo \
 X86LINUX64/lmrcImageSubtractionCalc.sharedo \
 X86LINUX64/lmrcImageSummationCalculate.sharedo \
+X86LINUX64/lmrcImageSurfaceAreaCalc.sharedo \
 X86LINUX64/lmrcImageSymmetryFind.sharedo \
 X86LINUX64/lmrcImageTfunction.sharedo \
 X86LINUX64/lmrcImageToneReversal.sharedo \
@@ -934,6 +944,7 @@ lmrcImageHighPassFilter.debugo \
 lmrcImageHighlighting.debugo \
 lmrcImageHoughTransform.debugo \
 lmrcImageLabeling.debugo \
+lmrcImageLocalMaximumValuesFind.debugo \
 lmrcImageLogicalOperation.debugo \
 lmrcImageLowPassFilter.debugo \
 lmrcImageMasking.debugo \
@@ -991,6 +1002,7 @@ lmrcImageStack.debugo \
 lmrcImageStudentCalculate.debugo \
 lmrcImageSubtractionCalc.debugo \
 lmrcImageSummationCalculate.debugo \
+lmrcImageSurfaceAreaCalc.debugo \
 lmrcImageSymmetryFind.debugo \
 lmrcImageTfunction.debugo \
 lmrcImageToneReversal.debugo \
@@ -1105,6 +1117,7 @@ X86LINUX64/lmrcImageHighPassFilter.debugo \
 X86LINUX64/lmrcImageHighlighting.debugo \
 X86LINUX64/lmrcImageHoughTransform.debugo \
 X86LINUX64/lmrcImageLabeling.debugo \
+X86LINUX64/lmrcImageLocalMaximumValuesFind.debugo \
 X86LINUX64/lmrcImageLogicalOperation.debugo \
 X86LINUX64/lmrcImageLowPassFilter.debugo \
 X86LINUX64/lmrcImageMasking.debugo \
@@ -1162,6 +1175,7 @@ X86LINUX64/lmrcImageStack.debugo \
 X86LINUX64/lmrcImageStudentCalculate.debugo \
 X86LINUX64/lmrcImageSubtractionCalc.debugo \
 X86LINUX64/lmrcImageSummationCalculate.debugo \
+X86LINUX64/lmrcImageSurfaceAreaCalc.debugo \
 X86LINUX64/lmrcImageSymmetryFind.debugo \
 X86LINUX64/lmrcImageTfunction.debugo \
 X86LINUX64/lmrcImageToneReversal.debugo \
@@ -1279,6 +1293,7 @@ lmrcImageHighPassFilter.cudagdb.o \
 lmrcImageHighlighting.cudagdb.o \
 lmrcImageHoughTransform.cudagdb.o \
 lmrcImageLabeling.cudagdb.o \
+lmrcImageLocalMaximumValuesFind.cudagdb.o \
 lmrcImageLogicalOperation.cudagdb.o \
 lmrcImageLowPassFilter.cudagdb.o \
 lmrcImageMasking.cudagdb.o \
@@ -1336,6 +1351,7 @@ lmrcImageStack.cudagdb.o \
 lmrcImageStudentCalculate.cudagdb.o \
 lmrcImageSubtractionCalc.cudagdb.o \
 lmrcImageSummationCalculate.cudagdb.o \
+lmrcImageSurfaceAreaCalc.cudagdb.o \
 lmrcImageSymmetryFind.cudagdb.o \
 lmrcImageTfunction.cudagdb.o \
 lmrcImageToneReversal.cudagdb.o \
@@ -1453,6 +1469,7 @@ X86LINUX64/lmrcImageHighPassFilter.cudagdb.o \
 X86LINUX64/lmrcImageHighlighting.cudagdb.o \
 X86LINUX64/lmrcImageHoughTransform.cudagdb.o \
 X86LINUX64/lmrcImageLabeling.cudagdb.o \
+X86LINUX64/lmrcImageLocalMaximumValuesFind.cudagdb.o \
 X86LINUX64/lmrcImageLogicalOperation.cudagdb.o \
 X86LINUX64/lmrcImageLowPassFilter.cudagdb.o \
 X86LINUX64/lmrcImageMasking.cudagdb.o \
@@ -1510,6 +1527,7 @@ X86LINUX64/lmrcImageStack.cudagdb.o \
 X86LINUX64/lmrcImageStudentCalculate.cudagdb.o \
 X86LINUX64/lmrcImageSubtractionCalc.cudagdb.o \
 X86LINUX64/lmrcImageSummationCalculate.cudagdb.o \
+X86LINUX64/lmrcImageSurfaceAreaCalc.cudagdb.o \
 X86LINUX64/lmrcImageSymmetryFind.cudagdb.o \
 X86LINUX64/lmrcImageTfunction.cudagdb.o \
 X86LINUX64/lmrcImageToneReversal.cudagdb.o \

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.debug.a b/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.debug.a
index d417380..cd6f4f6 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.debug.a and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/libmrcImage.debug.a differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTExpression.o b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTExpression.o
index 8a36ec4..e2dd87c 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTExpression.o and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTExpression.o differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTFGconj.o b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTFGconj.o
index b647fcb..a9fd6f7 100644 (file)
Binary files a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTFGconj.o and b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTFGconj.o differ

diff --git a/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTFxG.o b/src/Objects/DataManip/mrcImage/src/X86LINUX64/lmrcFFTFxG.o
index 12dadb1..be053e5 100644 (file)
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--- a/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/.Depend
+++ b/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/.Depend
@@ -66,14 +66,12 @@ ctfEnvelopFunctionEstimate.o: ctfEnvelopFunctionEstimate.c \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h \
  /home/people/tacyas/Eos/include/ctfInfo.h \
- /home/people/tacyas/Eos/include/./lctfDetermination.h \
- /home/people/tacyas/Eos/include/./mrcImage.h \
- /home/people/tacyas/Eos/include/./ctfInfo.h \
- /home/people/tacyas/Eos/include/./powerspectraTangentLine.h \
- /home/people/tacyas/Eos/include/./lctfDetermination.h \
- /home/people/tacyas/Eos/include/./ctfInfoWrite2.h \
- /home/people/tacyas/Eos/include/./lmrcFSInfoScatteringAngularDistributionAverageSection.h \
- /home/people/tacyas/Eos/include/./Vector.h
+ /home/people/tacyas/Eos/include/lctfDetermination.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/powerspectraTangentLine.h \
+ /home/people/tacyas/Eos/include/lctfDetermination.h \
+ /home/people/tacyas/Eos/include/ctfInfoWrite2.h \
+ /home/people/tacyas/Eos/include/lmrcFSInfoScatteringAngularDistributionAverageSection.h
 init.o: init.c /usr/include/stdio.h /usr/include/features.h \
  /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
  /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \

diff --git a/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/ctfEnvelopFunctionEstimate b/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/ctfEnvelopFunctionEstimate
index 8569252..ebcdedf 100755 (executable)
Binary files a/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/ctfEnvelopFunctionEstimate and b/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/ctfEnvelopFunctionEstimate differ

diff --git a/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/ctfEnvelopFunctionEstimate.o b/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/ctfEnvelopFunctionEstimate.o
index bbeadd9..c0e0c5a 100644 (file)
Binary files a/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/ctfEnvelopFunctionEstimate.o and b/src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/X86LINUX64/ctfEnvelopFunctionEstimate.o differ

diff --git a/src/Tools/ctfInfo/ctfFunction/src/X86LINUX64/ctfFunction b/src/Tools/ctfInfo/ctfFunction/src/X86LINUX64/ctfFunction
index e63f236..e39a181 100755 (executable)
Binary files a/src/Tools/ctfInfo/ctfFunction/src/X86LINUX64/ctfFunction and b/src/Tools/ctfInfo/ctfFunction/src/X86LINUX64/ctfFunction differ

diff --git a/src/Tools/ctfInfo/ctfMultiFunction/src/X86LINUX64/ctfMultiFunction b/src/Tools/ctfInfo/ctfMultiFunction/src/X86LINUX64/ctfMultiFunction
index 5895499..b79eff5 100755 (executable)
Binary files a/src/Tools/ctfInfo/ctfMultiFunction/src/X86LINUX64/ctfMultiFunction and b/src/Tools/ctfInfo/ctfMultiFunction/src/X86LINUX64/ctfMultiFunction differ

diff --git a/src/Tools/ctfInfo/ctfWeightMapCreation/src/X86LINUX64/ctfWeightMapCreation b/src/Tools/ctfInfo/ctfWeightMapCreation/src/X86LINUX64/ctfWeightMapCreation
index e9d10c4..7317219 100755 (executable)
Binary files a/src/Tools/ctfInfo/ctfWeightMapCreation/src/X86LINUX64/ctfWeightMapCreation and b/src/Tools/ctfInfo/ctfWeightMapCreation/src/X86LINUX64/ctfWeightMapCreation differ

diff --git a/src/Tools/ctfInfo/defocusDeterminationFromThonRing/src/X86LINUX64/defocusDeterminationFromThonRing b/src/Tools/ctfInfo/defocusDeterminationFromThonRing/src/X86LINUX64/defocusDeterminationFromThonRing
index a69a211..977769f 100755 (executable)
Binary files a/src/Tools/ctfInfo/defocusDeterminationFromThonRing/src/X86LINUX64/defocusDeterminationFromThonRing and b/src/Tools/ctfInfo/defocusDeterminationFromThonRing/src/X86LINUX64/defocusDeterminationFromThonRing differ

diff --git a/src/Tools/ctfInfo/electronWaveLength/src/X86LINUX64/electronWaveLength b/src/Tools/ctfInfo/electronWaveLength/src/X86LINUX64/electronWaveLength
index 6dbc90e..871728a 100755 (executable)
Binary files a/src/Tools/ctfInfo/electronWaveLength/src/X86LINUX64/electronWaveLength and b/src/Tools/ctfInfo/electronWaveLength/src/X86LINUX64/electronWaveLength differ

diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/.Depend b/src/Tools/filter/mrc2bild/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..08598e5
--- /dev/null
+++ b/src/Tools/filter/mrc2bild/src/X86LINUX64/.Depend
@@ -0,0 +1,127 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h ../inc/../inc/mrc2bild.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h ../inc/../inc/mrc2bild.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrc2bild.o: mrc2bild.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h ../inc/../inc/mrc2bild.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/bildFile.h \
+ /home/people/tacyas/Eos/include/mrcImage.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrc2bild.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrc2bild.h

diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/Makefile b/src/Tools/filter/mrc2bild/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..ec61247
--- /dev/null
+++ b/src/Tools/filter/mrc2bild/src/X86LINUX64/Makefile
@@ -0,0 +1,114 @@
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
+
+LIBFILES   = \
+                       $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
+
+LIBFILESDEBUG   = \
+                       $(LIBPREFIX)EosObjects.debug$(LIBSUFFIX) 
+
+SRCC  = \
+                       $(OBJECTNAME).c \
+                       init.c \
+                       argCheck.c \
+                       usage.c  \
+                       util.c 
+
+SRCCXX  = \
+                       $(OBJECTNAME).cc \
+                       init.cc \
+                       argCheck.cc \
+                       usage.cc  \
+                       util.cc 
+
+MODULES    = \
+                       $(OBJECTNAME).o \
+                       init.o \
+                       argCheck.o \
+                       usage.o  \
+                       util.o 
+
+REALMODULES    = \
+                       $(OSTYPE)/$(OBJECTNAME).o \
+                       $(OSTYPE)/init.o \
+                       $(OSTYPE)/argCheck.o \
+                       $(OSTYPE)/usage.o \
+                       $(OSTYPE)/util.o 
+
+MODULESDEBUG    = \
+                       $(OBJECTNAME).debugo \
+                       init.debugo \
+                       argCheck.debugo \
+                       usage.debugo  \
+                       util.debugo 
+
+MODULESCUDAGDB    = \
+                       $(OBJECTNAME).cudagdb.o \
+                       init.cudagdb.o \
+                       argCheck.cudagdb.o \
+                       usage.cudagdb.o  \
+                       util.cudagdb.o 
+
+REALMODULESDEBUG    = \
+                       $(OSTYPE)/$(OBJECTNAME).debugo \
+                       $(OSTYPE)/init.debugo \
+                       $(OSTYPE)/argCheck.debugo \
+                       $(OSTYPE)/usage.debugo \
+                       $(OSTYPE)/util.debugo 
+
+
+$(OBJECTNAME): $(MODULES) $(LIBFILES)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+       fi
+
+
+$(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+
+$(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
+       echo $(NVCC) "$(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@"
+       $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
+
+include ./.Depend
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc

diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/X86LINUX64 b/src/Tools/filter/mrc2bild/src/X86LINUX64/X86LINUX64
new file mode 120000 (symlink)
index 0000000..938aca9
--- /dev/null
+++ b/src/Tools/filter/mrc2bild/src/X86LINUX64/X86LINUX64
@@ -0,0 +1 @@
+../../../../../hostdepend/X86LINUX64/src/Tools/filter/mrc2bild/src/X86LINUX64
\ No newline at end of file

diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/argCheck.o b/src/Tools/filter/mrc2bild/src/X86LINUX64/argCheck.o
new file mode 100644 (file)
index 0000000..395c72e
Binary files /dev/null and b/src/Tools/filter/mrc2bild/src/X86LINUX64/argCheck.o differ

diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/init.o b/src/Tools/filter/mrc2bild/src/X86LINUX64/init.o
new file mode 100644 (file)
index 0000000..a0b1ae8
Binary files /dev/null and b/src/Tools/filter/mrc2bild/src/X86LINUX64/init.o differ

diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/mrc2bild b/src/Tools/filter/mrc2bild/src/X86LINUX64/mrc2bild
new file mode 100755 (executable)
index 0000000..6193f4f
Binary files /dev/null and b/src/Tools/filter/mrc2bild/src/X86LINUX64/mrc2bild differ

diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/mrc2bild.o b/src/Tools/filter/mrc2bild/src/X86LINUX64/mrc2bild.o
new file mode 100644 (file)
index 0000000..202060b
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diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/usage.o b/src/Tools/filter/mrc2bild/src/X86LINUX64/usage.o
new file mode 100644 (file)
index 0000000..397ce29
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diff --git a/src/Tools/filter/mrc2bild/src/X86LINUX64/util.o b/src/Tools/filter/mrc2bild/src/X86LINUX64/util.o
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index 0000000..a10fc34
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diff --git a/src/Tools/filter/mrc2fld/src/X86LINUX64/mrc2fld b/src/Tools/filter/mrc2fld/src/X86LINUX64/mrc2fld
index 4a837a8..6a94b94 100755 (executable)
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diff --git a/src/Tools/filter/mrc2gif/src/X86LINUX64/argCheck.o b/src/Tools/filter/mrc2gif/src/X86LINUX64/argCheck.o
index 8a5011a..46a5610 100644 (file)
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diff --git a/src/Tools/filter/mrc2gif/src/X86LINUX64/init.o b/src/Tools/filter/mrc2gif/src/X86LINUX64/init.o
index 2676d67..b3e8ffa 100644 (file)
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index 69ed025..4c67815 100644 (file)
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diff --git a/src/Tools/filter/mrc2gif/src/X86LINUX64/usage.o b/src/Tools/filter/mrc2gif/src/X86LINUX64/usage.o
index 173edfc..229b0f4 100644 (file)
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diff --git a/src/Tools/filter/mrc2tiff/src/X86LINUX64/argCheck.o b/src/Tools/filter/mrc2tiff/src/X86LINUX64/argCheck.o
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index 2676d67..b3e8ffa 100644 (file)
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diff --git a/src/Tools/filter/mrc2tiff/src/X86LINUX64/mrc2tiff b/src/Tools/filter/mrc2tiff/src/X86LINUX64/mrc2tiff
index b397793..843983c 100755 (executable)
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diff --git a/src/Tools/filter/mrc2tiff/src/X86LINUX64/mrc2tiff.o b/src/Tools/filter/mrc2tiff/src/X86LINUX64/mrc2tiff.o
index 48eedec..578ad40 100644 (file)
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index 173edfc..4e7e300 100644 (file)
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diff --git a/src/Tools/filter/pdb2ucd/src/X86LINUX64/pdb2ucd b/src/Tools/filter/pdb2ucd/src/X86LINUX64/pdb2ucd
index 343886d..13d08f5 100755 (executable)
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diff --git a/src/Tools/llData/llDataAverage/src/X86LINUX64/llDataAverage b/src/Tools/llData/llDataAverage/src/X86LINUX64/llDataAverage
index 523566a..e8c700c 100755 (executable)
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diff --git a/src/Tools/llData/llDataAxisSearch/src/X86LINUX64/llDataAxisSearch b/src/Tools/llData/llDataAxisSearch/src/X86LINUX64/llDataAxisSearch
index c927414..9e94137 100755 (executable)
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diff --git a/src/Tools/llData/llDataCTFCompensate/src/X86LINUX64/llDataCTFCompensate b/src/Tools/llData/llDataCTFCompensate/src/X86LINUX64/llDataCTFCompensate
index 97a14cf..55d8b78 100755 (executable)
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diff --git a/src/Tools/llData/llDataMultiCTFCompensation/src/X86LINUX64/llDataMultiCTFCompensation b/src/Tools/llData/llDataMultiCTFCompensation/src/X86LINUX64/llDataMultiCTFCompensation
index ef758b9..115b85c 100755 (executable)
Binary files a/src/Tools/llData/llDataMultiCTFCompensation/src/X86LINUX64/llDataMultiCTFCompensation and b/src/Tools/llData/llDataMultiCTFCompensation/src/X86LINUX64/llDataMultiCTFCompensation differ

diff --git a/src/Tools/mrcImage/mrcImageAreaCalc/src/X86LINUX64/mrcImageAreaCalc b/src/Tools/mrcImage/mrcImageAreaCalc/src/X86LINUX64/mrcImageAreaCalc
index 98151de..5d71ae1 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageAreaCalc/src/X86LINUX64/mrcImageAreaCalc and b/src/Tools/mrcImage/mrcImageAreaCalc/src/X86LINUX64/mrcImageAreaCalc differ

diff --git a/src/Tools/mrcImage/mrcImageCTFCompensation/src/X86LINUX64/mrcImageCTFCompensation b/src/Tools/mrcImage/mrcImageCTFCompensation/src/X86LINUX64/mrcImageCTFCompensation
index c0e9d72..f1d2210 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageCTFCompensation/src/X86LINUX64/mrcImageCTFCompensation and b/src/Tools/mrcImage/mrcImageCTFCompensation/src/X86LINUX64/mrcImageCTFCompensation differ

diff --git a/src/Tools/mrcImage/mrcImageCTFDetermination/src/X86LINUX64/mrcImageCTFDetermination b/src/Tools/mrcImage/mrcImageCTFDetermination/src/X86LINUX64/mrcImageCTFDetermination
index a1bd897..5f6b24d 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCTFObservation/src/X86LINUX64/mrcImageCTFObservation b/src/Tools/mrcImage/mrcImageCTFObservation/src/X86LINUX64/mrcImageCTFObservation
index 3f1c88c..d897afb 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageCTFSN/src/X86LINUX64/mrcImageCTFSN b/src/Tools/mrcImage/mrcImageCTFSN/src/X86LINUX64/mrcImageCTFSN
index ae2abe6..1197637 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageCTFSN/src/X86LINUX64/mrcImageCTFSN and b/src/Tools/mrcImage/mrcImageCTFSN/src/X86LINUX64/mrcImageCTFSN differ

diff --git a/src/Tools/mrcImage/mrcImageChainCodeCalc/src/X86LINUX64/X86LINUX64 b/src/Tools/mrcImage/mrcImageChainCodeCalc/src/X86LINUX64/X86LINUX64
new file mode 120000 (symlink)
index 0000000..15bb2f7
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageChainCodeCalc/src/X86LINUX64/X86LINUX64
@@ -0,0 +1 @@
+../../../../../hostdepend/X86LINUX64/src/Tools/mrcImage/mrcImageChainCodeCalc/src/X86LINUX64
\ No newline at end of file

diff --git a/src/Tools/mrcImage/mrcImageChainCodeCalc/src/X86LINUX64/mrcImageChainCodeCalc b/src/Tools/mrcImage/mrcImageChainCodeCalc/src/X86LINUX64/mrcImageChainCodeCalc
index 3f77935..f63927c 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/argCheck.o b/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/argCheck.o
index 5310336..379173f 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/init.o b/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/init.o
index 6642a57..7823162 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/mrcImageClusterAnalysis b/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/mrcImageClusterAnalysis
index 1736d9b..0302cc5 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/mrcImageClusterAnalysis.o b/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/mrcImageClusterAnalysis.o
index ee1d7b3..2497857 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/usage.o b/src/Tools/mrcImage/mrcImageClusterAnalysis/src/X86LINUX64/usage.o
index c863bca..44249e8 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImageEdgeCalc/src/X86LINUX64/mrcImageEdgeCalc b/src/Tools/mrcImage/mrcImageEdgeCalc/src/X86LINUX64/mrcImageEdgeCalc
index e278c78..0415db9 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageEdgeCalc/src/X86LINUX64/mrcImageEdgeCalc and b/src/Tools/mrcImage/mrcImageEdgeCalc/src/X86LINUX64/mrcImageEdgeCalc differ

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..2eea1b5
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/.Depend
@@ -0,0 +1,133 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageFeatureCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageFeatureCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrcImageFeatureCalc.o: mrcImageFeatureCalc.c /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageFeatureCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/lmrcImageFeatureCalc.h \
+ /home/people/tacyas/Eos/include/lmrcImageCalcArea.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/lmrcImageLabeling.h \
+ /home/people/tacyas/Eos/include/lmrcImageEdge.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageFeatureCalc.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageFeatureCalc.h

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/Makefile b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..ec61247
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/Makefile
@@ -0,0 +1,114 @@
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
+
+LIBFILES   = \
+                       $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
+
+LIBFILESDEBUG   = \
+                       $(LIBPREFIX)EosObjects.debug$(LIBSUFFIX) 
+
+SRCC  = \
+                       $(OBJECTNAME).c \
+                       init.c \
+                       argCheck.c \
+                       usage.c  \
+                       util.c 
+
+SRCCXX  = \
+                       $(OBJECTNAME).cc \
+                       init.cc \
+                       argCheck.cc \
+                       usage.cc  \
+                       util.cc 
+
+MODULES    = \
+                       $(OBJECTNAME).o \
+                       init.o \
+                       argCheck.o \
+                       usage.o  \
+                       util.o 
+
+REALMODULES    = \
+                       $(OSTYPE)/$(OBJECTNAME).o \
+                       $(OSTYPE)/init.o \
+                       $(OSTYPE)/argCheck.o \
+                       $(OSTYPE)/usage.o \
+                       $(OSTYPE)/util.o 
+
+MODULESDEBUG    = \
+                       $(OBJECTNAME).debugo \
+                       init.debugo \
+                       argCheck.debugo \
+                       usage.debugo  \
+                       util.debugo 
+
+MODULESCUDAGDB    = \
+                       $(OBJECTNAME).cudagdb.o \
+                       init.cudagdb.o \
+                       argCheck.cudagdb.o \
+                       usage.cudagdb.o  \
+                       util.cudagdb.o 
+
+REALMODULESDEBUG    = \
+                       $(OSTYPE)/$(OBJECTNAME).debugo \
+                       $(OSTYPE)/init.debugo \
+                       $(OSTYPE)/argCheck.debugo \
+                       $(OSTYPE)/usage.debugo \
+                       $(OSTYPE)/util.debugo 
+
+
+$(OBJECTNAME): $(MODULES) $(LIBFILES)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+       fi
+
+
+$(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+
+$(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
+       echo $(NVCC) "$(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@"
+       $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
+
+include ./.Depend
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/X86LINUX64 b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/X86LINUX64
new file mode 120000 (symlink)
index 0000000..83f7534
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/X86LINUX64
@@ -0,0 +1 @@
+../../../../../hostdepend/X86LINUX64/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64
\ No newline at end of file

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/argCheck.o b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/argCheck.o
new file mode 100644 (file)
index 0000000..924102c
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/argCheck.o differ

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/init.o b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/init.o
new file mode 100644 (file)
index 0000000..11be447
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/init.o differ

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/mrcImageFeatureCalc b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/mrcImageFeatureCalc
new file mode 100755 (executable)
index 0000000..1ee5a05
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/mrcImageFeatureCalc differ

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/mrcImageFeatureCalc.o b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/mrcImageFeatureCalc.o
new file mode 100644 (file)
index 0000000..27ba177
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/mrcImageFeatureCalc.o differ

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/usage.o b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/usage.o
new file mode 100644 (file)
index 0000000..c396ae5
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/usage.o differ

diff --git a/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/util.o b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/util.o
new file mode 100644 (file)
index 0000000..a10fc34
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageFeatureCalc/src/X86LINUX64/util.o differ

diff --git a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/argCheck.o b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/argCheck.o
index 0bee7ec..2947401 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/argCheck.o and b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/argCheck.o differ

diff --git a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/init.o b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/init.o
index 591bab6..a555523 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/init.o and b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/init.o differ

diff --git a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/mrcImageLabeling b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/mrcImageLabeling
index 98db7b2..f12524c 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/mrcImageLabeling and b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/mrcImageLabeling differ

diff --git a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/mrcImageLabeling.o b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/mrcImageLabeling.o
index ee7d74f..d15f9b3 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/mrcImageLabeling.o and b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/mrcImageLabeling.o differ

diff --git a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/usage.o b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/usage.o
index f720f1c..ca8c65d 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/usage.o and b/src/Tools/mrcImage/mrcImageLabeling/src/X86LINUX64/usage.o differ

diff --git a/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/.Depend
index 38ca4ae..cd527b9 100644 (file)
--- a/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/.Depend
+++ b/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/.Depend
@@ -94,7 +94,9 @@ mrcImageLocalMaximumValuesFind.o: mrcImageLocalMaximumValuesFind.c \
  /home/people/tacyas/Eos/include/Matrix3D.h \
  /home/people/tacyas/Eos/include/Vector.h \
  /home/people/tacyas/Eos/include/Array.h \
- /home/people/tacyas/Eos/include/ctfInfo.h
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/lmrcImageLocal.h \
+ /home/people/tacyas/Eos/include/mrcImage.h
 usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
  /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
  /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \

diff --git a/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/mrcImageLocalMaximumValuesFind b/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/mrcImageLocalMaximumValuesFind
index 532684f..203b347 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/mrcImageLocalMaximumValuesFind and b/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/mrcImageLocalMaximumValuesFind differ

diff --git a/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/mrcImageLocalMaximumValuesFind.o b/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/mrcImageLocalMaximumValuesFind.o
index dae90f3..4ed4211 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/mrcImageLocalMaximumValuesFind.o and b/src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/X86LINUX64/mrcImageLocalMaximumValuesFind.o differ

diff --git a/src/Tools/mrcImage/mrcImageMontageCreate/src/X86LINUX64/mrcImageMontageCreate b/src/Tools/mrcImage/mrcImageMontageCreate/src/X86LINUX64/mrcImageMontageCreate
index 41f14a8..512be08 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageMontageCreate/src/X86LINUX64/mrcImageMontageCreate and b/src/Tools/mrcImage/mrcImageMontageCreate/src/X86LINUX64/mrcImageMontageCreate differ

diff --git a/src/Tools/mrcImage/mrcImageMultiCTFCompensation/src/X86LINUX64/mrcImageMultiCTFCompensation b/src/Tools/mrcImage/mrcImageMultiCTFCompensation/src/X86LINUX64/mrcImageMultiCTFCompensation
index c065867..6bfa4d0 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageMultiCTFCompensation/src/X86LINUX64/mrcImageMultiCTFCompensation and b/src/Tools/mrcImage/mrcImageMultiCTFCompensation/src/X86LINUX64/mrcImageMultiCTFCompensation differ

diff --git a/src/Tools/mrcImage/mrcImageMultiCTFDetermination/src/X86LINUX64/mrcImageMultiCTFDetermination b/src/Tools/mrcImage/mrcImageMultiCTFDetermination/src/X86LINUX64/mrcImageMultiCTFDetermination
index 2b0d609..ead1b00 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageMultiCTFDetermination/src/X86LINUX64/mrcImageMultiCTFDetermination and b/src/Tools/mrcImage/mrcImageMultiCTFDetermination/src/X86LINUX64/mrcImageMultiCTFDetermination differ

diff --git a/src/Tools/mrcImage/mrcImagePad/src/X86LINUX64/mrcImagePad b/src/Tools/mrcImage/mrcImagePad/src/X86LINUX64/mrcImagePad
index 20cd1c1..f506cdc 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImagePattersonFunctionCalc/src/X86LINUX64/mrcImagePattersonFunctionCalc.o b/src/Tools/mrcImage/mrcImagePattersonFunctionCalc/src/X86LINUX64/mrcImagePattersonFunctionCalc.o
index 27cc815..daf847b 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImagePeakSearch/src/X86LINUX64/mrcImagePeakSearch b/src/Tools/mrcImage/mrcImagePeakSearch/src/X86LINUX64/mrcImagePeakSearch
index 3837b10..3ae7776 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImagePerimeterCalc/src/X86LINUX64/mrcImagePerimeterCalc b/src/Tools/mrcImage/mrcImagePerimeterCalc/src/X86LINUX64/mrcImagePerimeterCalc
index 72adf0b..7e6ba7b 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageProjection/src/X86LINUX64/mrcImageProjection b/src/Tools/mrcImage/mrcImageProjection/src/X86LINUX64/mrcImageProjection
index 53534bb..301343a 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageProjection/src/X86LINUX64/mrcImageProjection.o b/src/Tools/mrcImage/mrcImageProjection/src/X86LINUX64/mrcImageProjection.o
index b9e0b3c..333cbc2 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageProjection/src/X86LINUX64/mrcImageProjection.o and b/src/Tools/mrcImage/mrcImageProjection/src/X86LINUX64/mrcImageProjection.o differ

diff --git a/src/Tools/mrcImage/mrcImageROIs/src/X86LINUX64/mrcImageROIs b/src/Tools/mrcImage/mrcImageROIs/src/X86LINUX64/mrcImageROIs
index e26915f..0aea063 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/argCheck.o b/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/argCheck.o
index 53e21f9..20b9e54 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/init.o b/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/init.o
index a555523..3d5ffff 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/mrcImageSectionGet b/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/mrcImageSectionGet
index a66bf67..ef47bb6 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/mrcImageSectionGet and b/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/mrcImageSectionGet differ

diff --git a/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/mrcImageSectionGet.o b/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/mrcImageSectionGet.o
index 3ca9d12..14ed7cb 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/mrcImageSectionGet.o and b/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/mrcImageSectionGet.o differ

diff --git a/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/usage.o b/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/usage.o
index 8ed8b5e..d79b843 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/usage.o and b/src/Tools/mrcImage/mrcImageSectionGet/src/X86LINUX64/usage.o differ

diff --git a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/.Depend
index c28eb63..6f207a1 100644 (file)
--- a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/.Depend
+++ b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/.Depend
@@ -97,7 +97,8 @@ mrcImageShapeSearch.o: mrcImageShapeSearch.c /usr/include/stdio.h \
  /home/people/tacyas/Eos/include/mrcImage.h \
  /home/people/tacyas/Eos/include/genUtil.h \
  /home/people/tacyas/Eos/include/Matrix3D.h \
- /home/people/tacyas/Eos/include/ctfInfo.h
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/avsFile.h
 usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
  /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
  /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \

diff --git a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/argCheck.o b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/argCheck.o
index 7e9a914..0178c5c 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/argCheck.o and b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/argCheck.o differ

diff --git a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/init.o b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/init.o
index 33eb5a7..ed744a6 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/mrcImageShapeSearch b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/mrcImageShapeSearch
index a62a9a8..63c7485 100755 (executable)
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diff --git a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/mrcImageShapeSearch.o b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/mrcImageShapeSearch.o
index 44d2a63..305c040 100644 (file)
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diff --git a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/usage.o b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/usage.o
index 6f0f57c..ad3b4f4 100644 (file)
Binary files a/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/usage.o and b/src/Tools/mrcImage/mrcImageShapeSearch/src/X86LINUX64/usage.o differ

diff --git a/src/Tools/mrcImage/mrcImageSimilarityEstimate/src/X86LINUX64/mrcImageSimilarityEstimate b/src/Tools/mrcImage/mrcImageSimilarityEstimate/src/X86LINUX64/mrcImageSimilarityEstimate
index a20c542..e1ef98c 100755 (executable)
Binary files a/src/Tools/mrcImage/mrcImageSimilarityEstimate/src/X86LINUX64/mrcImageSimilarityEstimate and b/src/Tools/mrcImage/mrcImageSimilarityEstimate/src/X86LINUX64/mrcImageSimilarityEstimate differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..4ad8c2e
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/.Depend
@@ -0,0 +1,133 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceAreaCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceAreaCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrcImageSurfaceAreaCalc.o: mrcImageSurfaceAreaCalc.c /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceAreaCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/lmrcImageFeatureCalc.h \
+ /home/people/tacyas/Eos/include/lmrcImageCalcArea.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h \
+ /home/people/tacyas/Eos/include/lmrcImageLabeling.h \
+ /home/people/tacyas/Eos/include/lmrcImageEdge.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceAreaCalc.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceAreaCalc.h

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/Makefile b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..ec61247
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/Makefile
@@ -0,0 +1,114 @@
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
+
+LIBFILES   = \
+                       $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
+
+LIBFILESDEBUG   = \
+                       $(LIBPREFIX)EosObjects.debug$(LIBSUFFIX) 
+
+SRCC  = \
+                       $(OBJECTNAME).c \
+                       init.c \
+                       argCheck.c \
+                       usage.c  \
+                       util.c 
+
+SRCCXX  = \
+                       $(OBJECTNAME).cc \
+                       init.cc \
+                       argCheck.cc \
+                       usage.cc  \
+                       util.cc 
+
+MODULES    = \
+                       $(OBJECTNAME).o \
+                       init.o \
+                       argCheck.o \
+                       usage.o  \
+                       util.o 
+
+REALMODULES    = \
+                       $(OSTYPE)/$(OBJECTNAME).o \
+                       $(OSTYPE)/init.o \
+                       $(OSTYPE)/argCheck.o \
+                       $(OSTYPE)/usage.o \
+                       $(OSTYPE)/util.o 
+
+MODULESDEBUG    = \
+                       $(OBJECTNAME).debugo \
+                       init.debugo \
+                       argCheck.debugo \
+                       usage.debugo  \
+                       util.debugo 
+
+MODULESCUDAGDB    = \
+                       $(OBJECTNAME).cudagdb.o \
+                       init.cudagdb.o \
+                       argCheck.cudagdb.o \
+                       usage.cudagdb.o  \
+                       util.cudagdb.o 
+
+REALMODULESDEBUG    = \
+                       $(OSTYPE)/$(OBJECTNAME).debugo \
+                       $(OSTYPE)/init.debugo \
+                       $(OSTYPE)/argCheck.debugo \
+                       $(OSTYPE)/usage.debugo \
+                       $(OSTYPE)/util.debugo 
+
+
+$(OBJECTNAME): $(MODULES) $(LIBFILES)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+       fi
+
+
+$(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+
+$(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
+       echo $(NVCC) "$(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@"
+       $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
+
+include ./.Depend
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/X86LINUX64 b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/X86LINUX64
new file mode 120000 (symlink)
index 0000000..626b3cb
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/X86LINUX64
@@ -0,0 +1 @@
+../../../../../hostdepend/X86LINUX64/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64
\ No newline at end of file

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/argCheck.o b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/argCheck.o
new file mode 100644 (file)
index 0000000..2eba669
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/argCheck.o differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/init.o b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/init.o
new file mode 100644 (file)
index 0000000..0a3cbba
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/init.o differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/mrcImageSurfaceAreaCalc b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/mrcImageSurfaceAreaCalc
new file mode 100755 (executable)
index 0000000..095c7bd
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/mrcImageSurfaceAreaCalc differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/mrcImageSurfaceAreaCalc.o b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/mrcImageSurfaceAreaCalc.o
new file mode 100644 (file)
index 0000000..6fd11e2
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/mrcImageSurfaceAreaCalc.o differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/usage.o b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/usage.o
new file mode 100644 (file)
index 0000000..06c30e4
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/usage.o differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/util.o b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/util.o
new file mode 100644 (file)
index 0000000..a10fc34
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceAreaCalc/src/X86LINUX64/util.o differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/.Depend b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/.Depend
new file mode 100644 (file)
index 0000000..787453a
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/.Depend
@@ -0,0 +1,130 @@
+argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+init.o: init.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/String.h \
+ /home/people/tacyas/Eos/include/File.h \
+ /home/people/tacyas/Eos/include/Memory.h
+mrcImageSurfaceCalc.o: mrcImageSurfaceCalc.c /usr/include/stdio.h \
+ /usr/include/features.h /usr/include/sys/cdefs.h \
+ /usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
+ /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
+ /usr/include/string.h /usr/include/xlocale.h /usr/include/math.h \
+ /usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
+ /usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
+ /usr/include/bits/nan.h /usr/include/bits/mathdef.h \
+ /usr/include/bits/mathcalls.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceCalc.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
+ /home/people/tacyas/Eos/include/lmrcImageEdge.h \
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/Matrix3D.h \
+ /home/people/tacyas/Eos/include/Vector.h \
+ /home/people/tacyas/Eos/include/Array.h \
+ /home/people/tacyas/Eos/include/ctfInfo.h
+usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceCalc.h
+util.o: util.c /usr/include/stdio.h /usr/include/features.h \
+ /usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
+ /usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
+ /usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
+ /usr/include/bits/select.h /usr/include/bits/sigset.h \
+ /usr/include/bits/time.h /usr/include/sys/sysmacros.h \
+ /usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+ ../inc/../inc/mrcImageSurfaceCalc.h

diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/Makefile b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/Makefile
new file mode 100755 (executable)
index 0000000..ec61247
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/Makefile
@@ -0,0 +1,114 @@
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/Config/Define.inc
+include $(EOS_HOME)/src/$(WORLDNAME)/Config/Define.inc
+include $(EOS_HOME)/src/Config/DefineTool.inc
+
+LIBFILES   = \
+                       $(LIBPREFIX)EosObjects$(LIBSUFFIX) 
+
+LIBFILESDEBUG   = \
+                       $(LIBPREFIX)EosObjects.debug$(LIBSUFFIX) 
+
+SRCC  = \
+                       $(OBJECTNAME).c \
+                       init.c \
+                       argCheck.c \
+                       usage.c  \
+                       util.c 
+
+SRCCXX  = \
+                       $(OBJECTNAME).cc \
+                       init.cc \
+                       argCheck.cc \
+                       usage.cc  \
+                       util.cc 
+
+MODULES    = \
+                       $(OBJECTNAME).o \
+                       init.o \
+                       argCheck.o \
+                       usage.o  \
+                       util.o 
+
+REALMODULES    = \
+                       $(OSTYPE)/$(OBJECTNAME).o \
+                       $(OSTYPE)/init.o \
+                       $(OSTYPE)/argCheck.o \
+                       $(OSTYPE)/usage.o \
+                       $(OSTYPE)/util.o 
+
+MODULESDEBUG    = \
+                       $(OBJECTNAME).debugo \
+                       init.debugo \
+                       argCheck.debugo \
+                       usage.debugo  \
+                       util.debugo 
+
+MODULESCUDAGDB    = \
+                       $(OBJECTNAME).cudagdb.o \
+                       init.cudagdb.o \
+                       argCheck.cudagdb.o \
+                       usage.cudagdb.o  \
+                       util.cudagdb.o 
+
+REALMODULESDEBUG    = \
+                       $(OSTYPE)/$(OBJECTNAME).debugo \
+                       $(OSTYPE)/init.debugo \
+                       $(OSTYPE)/argCheck.debugo \
+                       $(OSTYPE)/usage.debugo \
+                       $(OSTYPE)/util.debugo 
+
+
+$(OBJECTNAME): $(MODULES) $(LIBFILES)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+               $(NVCC) $(NVCCOPTS) $(MODULES) $(LIBFILES) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) $(CUDALIB) $(CUDAINC) -o $@ ;  \
+       fi
+
+
+$(OBJECTNAME).debug: $(MODULESDEBUG) $(LIBFILESDEBUG)
+       @if [ -f $(VPATH)/$(OBJECTNAME).c ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cc ] ; \
+       then \
+               echo $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(CXX) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).ccm ] ; \
+       then \
+               echo "MICO"; \
+               echo $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+               $(MICOLD) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@  ; \
+       fi
+       @if [ -f $(VPATH)/$(OBJECTNAME).cu ] ; \
+       then \
+               echo $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+               $(CC) $(CCOPTSDEBUG) $(MODULESDEBUG) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@ ;  \
+       fi
+
+$(OBJECTNAME).cudagdb: $(MODULESCUDAGDB) $(LIBFILESDEBUG)
+       echo $(NVCC) "$(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@"
+       $(NVCC) $(NVCCOPTSCUDAGDB) $(MODULESCUDAGDB) $(LIBFILESDEBUG) $(EXTRA_LIB) $(KHOROS_LIBS) $(LIBPVM) $(STANDARDLIB) $(HOSTDEPENDENTLIB) -o $@
+
+include ./.Depend
+include  $(EOS_HOME)/src/$(WORLDNAME)/$(CLASSNAME)/$(OBJECTNAME)/Config/Target.inc

diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/X86LINUX64 b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/X86LINUX64
new file mode 120000 (symlink)
index 0000000..0d9ee93
--- /dev/null
+++ b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/X86LINUX64
@@ -0,0 +1 @@
+../../../../../hostdepend/X86LINUX64/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64
\ No newline at end of file

diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/argCheck.o b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/argCheck.o
new file mode 100644 (file)
index 0000000..2947401
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/argCheck.o differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/init.o b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/init.o
new file mode 100644 (file)
index 0000000..96cbfff
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/init.o differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/mrcImageSurfaceCalc b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/mrcImageSurfaceCalc
new file mode 100755 (executable)
index 0000000..9cebc3c
Binary files /dev/null and b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/mrcImageSurfaceCalc differ

diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/mrcImageSurfaceCalc.o b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/mrcImageSurfaceCalc.o
new file mode 100644 (file)
index 0000000..a535ca0
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diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/usage.o b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/usage.o
new file mode 100644 (file)
index 0000000..05fe86f
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diff --git a/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/util.o b/src/Tools/mrcImage/mrcImageSurfaceCalc/src/X86LINUX64/util.o
new file mode 100644 (file)
index 0000000..a10fc34
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diff --git a/src/Tools/pdbUtil/pdb2mrc2dWithCTF/src/X86LINUX64/pdb2mrc2dWithCTF b/src/Tools/pdbUtil/pdb2mrc2dWithCTF/src/X86LINUX64/pdb2mrc2dWithCTF
index 70c6a6e..51fb2c4 100755 (executable)
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diff --git a/src/Tools/rec3d/llExtractCtfinfFileCreate/src/X86LINUX64/llExtractCtfinfFileCreate b/src/Tools/rec3d/llExtractCtfinfFileCreate/src/X86LINUX64/llExtractCtfinfFileCreate
index a51049b..8e7e8b9 100755 (executable)
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diff --git a/src/Tools/rec3d/llExtractWithLayerSeparation/src/X86LINUX64/llExtractWithLayerSeparation b/src/Tools/rec3d/llExtractWithLayerSeparation/src/X86LINUX64/llExtractWithLayerSeparation
index 01b9285..94ea97b 100755 (executable)
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