@echo ">> Help"
@echo ">>>> Download"
@echo "---- To register new/Modified source codes. ----"
- @echo " $$ make git-add or git-add[-all|-data|-tutorial|-optional|-others]"
- @echo " $$ make git-commit or git-commit[-all|-data|-tutorial|-optional|-others]"
+ @echo " $$ make git-add or git-add[-all|-data|-tutorial|-optional|-others|-others2]"
+ @echo " $$ make git-commit or git-commit[-all|-data|-tutorial|-optional|-others|-others2]"
@echo " $$ git tag "
@echo " $$ git tag newtag "
@echo " $$ make git-push or git-push[-all|-data|-tutorial|-optional|-others]"
@echo " [-tutorial] : tutorial"
@echo " [-optional] : optional(for documents)"
@echo " [-others] : other source codes for utils"
+ @echo " [-others2] : other source codes for utils"
@echo " [-all] : all"
@echo ""
@echo ">>>> Setting"
git-add-others::
cd others; git add .
+git-add-others2::
+ cd others2; git add .
+
git-commit-all:: git-commit git-commit-data git-commit-optional git-commit-tutorial git-commit-others
git-commit::
git-commit-others::
cd others; git commit
+git-commit-others2::
+ cd others2; git commit
+
git-backup::
git push $(EOS_GIT_BACKUPSITE) master --tags
then \
git clone --depth 1 $${EOS_GITUSER}@$(EOS_GIT_REPOSITRY_OTHERS) ./ ; \
fi
+ cd others ; git remote add others $${EOS_GIT_USER}@$(EOS_GIT_REPOSITRY_OTHERS)
+
+git-init-others2::
+ if [ ! -d others2 ] ; then mkdir others2; fi
+ cd others2 ; git remote add others2 $${EOS_GIT_USER}@$(EOS_GIT_REPOSITRY_OTHERS)
+
/usr/include/features.h /usr/include/sys/cdefs.h \
/usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
/usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/math.h \
/usr/include/bits/huge_val.h /usr/include/bits/huge_valf.h \
/usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
/usr/include/bits/nan.h /usr/include/bits/mathdef.h \
/usr/include/bits/mathcalls.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/Memory.h /usr/include/stdlib.h \
- /usr/include/sys/types.h /usr/include/time.h /usr/include/endian.h \
- /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
- /usr/include/sys/select.h /usr/include/bits/select.h \
+ /usr/include/bits/waitflags.h /usr/include/bits/waitstatus.h \
+ /usr/include/endian.h /usr/include/bits/endian.h \
+ /usr/include/bits/byteswap.h /usr/include/sys/types.h \
+ /usr/include/time.h /usr/include/sys/select.h /usr/include/bits/select.h \
/usr/include/bits/sigset.h /usr/include/bits/time.h \
/usr/include/sys/sysmacros.h /usr/include/bits/pthreadtypes.h \
/usr/include/alloca.h /home/people/tacyas/Eos/include/Vector.h \
/usr/include/features.h /usr/include/sys/cdefs.h \
/usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
/usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
/home/people/tacyas/Eos/include/Memory.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h /usr/include/stdlib.h \
- /usr/include/sys/types.h /usr/include/time.h /usr/include/endian.h \
- /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
- /usr/include/sys/select.h /usr/include/bits/select.h \
+ /usr/include/bits/waitflags.h /usr/include/bits/waitstatus.h \
+ /usr/include/endian.h /usr/include/bits/endian.h \
+ /usr/include/bits/byteswap.h /usr/include/sys/types.h \
+ /usr/include/time.h /usr/include/sys/select.h /usr/include/bits/select.h \
/usr/include/bits/sigset.h /usr/include/bits/time.h \
/usr/include/sys/sysmacros.h /usr/include/bits/pthreadtypes.h \
/usr/include/alloca.h ../inc/Cluster.h
/usr/include/features.h /usr/include/sys/cdefs.h \
/usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
/usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /home/people/tacyas/Eos/include/Memory.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
- /usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
- /home/people/tacyas/Eos/include/Memory.h /usr/include/stdlib.h \
- /usr/include/sys/types.h /usr/include/time.h /usr/include/endian.h \
- /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
- /usr/include/sys/select.h /usr/include/bits/select.h \
+ /usr/include/bits/posix2_lim.h /usr/include/stdlib.h \
+ /usr/include/bits/waitflags.h /usr/include/bits/waitstatus.h \
+ /usr/include/endian.h /usr/include/bits/endian.h \
+ /usr/include/bits/byteswap.h /usr/include/sys/types.h \
+ /usr/include/time.h /usr/include/sys/select.h /usr/include/bits/select.h \
/usr/include/bits/sigset.h /usr/include/bits/time.h \
/usr/include/sys/sysmacros.h /usr/include/bits/pthreadtypes.h \
/usr/include/alloca.h /home/people/tacyas/Eos/include/String.h \
/usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
/usr/include/bits/inf.h /usr/include/bits/nan.h \
/usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
+ /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/mrcImage.h \
/home/people/tacyas/Eos/include/genUtil.h \
/home/people/tacyas/Eos/include/ctfInfo.h \
/usr/include/bits/inf.h /usr/include/bits/nan.h \
/usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
/usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/Memory.h /usr/include/stdio.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/features.h /usr/include/sys/cdefs.h \
/usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
/usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
- /usr/include/sys/types.h /usr/include/bits/types.h \
- /usr/include/bits/typesizes.h /usr/include/time.h /usr/include/endian.h \
- /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
- /usr/include/sys/select.h /usr/include/bits/select.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
+ /usr/include/bits/waitflags.h /usr/include/bits/waitstatus.h \
+ /usr/include/endian.h /usr/include/bits/endian.h \
+ /usr/include/bits/byteswap.h /usr/include/sys/types.h \
+ /usr/include/bits/types.h /usr/include/bits/typesizes.h \
+ /usr/include/time.h /usr/include/sys/select.h /usr/include/bits/select.h \
/usr/include/bits/sigset.h /usr/include/bits/time.h \
/usr/include/sys/sysmacros.h /usr/include/bits/pthreadtypes.h \
/usr/include/alloca.h /usr/include/stdio.h /usr/include/libio.h \
/usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
/usr/include/math.h /usr/include/bits/huge_val.h \
/usr/include/bits/huge_valf.h /usr/include/bits/huge_vall.h \
/usr/include/bits/mathdef.h /usr/include/bits/mathcalls.h \
/usr/include/string.h /usr/include/xlocale.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/Memory.h \
/home/people/tacyas/Eos/include/mrcImage.h \
@COMPILEDOBJ=`ls $(SHAREDOBJ)` ; echo "#### Compiled Objects"; echo $${COMPILEDOBJ}; echo "################"; \
$(SHARED) $(SHAREDLIB) $${COMPILEDOBJ}
+debug: $(LIBNAMEDEBUG) $(LIBNAMECUDAGDB)
+
$(LIBNAMEDEBUG): $(OBJDEBUG)
@echo LIBNAME:$(LIBNAMEDEBUG)
$(AR) rs $(LIBNAMEDEBUG) $(OBJDEBUG)
argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageAddValue.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/File.h \
/home/people/tacyas/Eos/include/Memory.h
init.o: init.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageAddValue.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/File.h \
/home/people/tacyas/Eos/include/Memory.h
/usr/include/features.h /usr/include/sys/cdefs.h \
/usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
/usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageAddValue.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/mrcImage.h \
/home/people/tacyas/Eos/include/genUtil.h \
/home/people/tacyas/Eos/include/ctfInfo.h \
/home/people/tacyas/Eos/include/Matrix3D.h \
/home/people/tacyas/Eos/include/Array.h \
/home/people/tacyas/Eos/include/lmrcImageAddValue.h \
- /home/people/tacyas/Eos/include/mrcImage.h
+ /home/people/tacyas/Eos/include/mrcImage.h \
+ /home/people/tacyas/Eos/include/eosCuda.h
usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
util.o: util.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageClusterAnalysis.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/File.h \
/home/people/tacyas/Eos/include/Memory.h
init.o: init.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageClusterAnalysis.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/File.h \
/home/people/tacyas/Eos/include/Memory.h
/usr/include/features.h /usr/include/sys/cdefs.h \
/usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
/usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/huge_vall.h /usr/include/bits/inf.h \
/usr/include/bits/nan.h /usr/include/bits/mathdef.h \
/usr/include/bits/mathcalls.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h ../inc/config.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h ../inc/config.h \
../inc/../inc/mrcImageClusterAnalysis.h \
/home/people/tacyas/Eos/include/genUtil.h \
/home/people/tacyas/Eos/include/mrcImage.h \
usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
util.o: util.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageDilation.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/File.h \
/home/people/tacyas/Eos/include/Memory.h
init.o: init.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageDilation.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/File.h \
/home/people/tacyas/Eos/include/Memory.h
/usr/include/features.h /usr/include/sys/cdefs.h \
/usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
/usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageDilation.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/mrcImage.h \
/home/people/tacyas/Eos/include/genUtil.h \
/home/people/tacyas/Eos/include/ctfInfo.h \
usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
util.o: util.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
argCheck.o: argCheck.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageOrientationSearchBySimultaneousMinimization.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/File.h \
/home/people/tacyas/Eos/include/Memory.h
init.o: init.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageOrientationSearchBySimultaneousMinimization.h \
/home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
/usr/include/limits.h /usr/include/bits/posix1_lim.h \
/usr/include/bits/local_lim.h /usr/include/linux/limits.h \
/usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/String.h \
/home/people/tacyas/Eos/include/File.h \
/home/people/tacyas/Eos/include/Memory.h
/usr/include/stdio.h /usr/include/features.h /usr/include/sys/cdefs.h \
/usr/include/bits/wordsize.h /usr/include/gnu/stubs.h \
/usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/values.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/limits.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include-fixed/syslimits.h \
- /usr/include/limits.h /usr/include/bits/posix1_lim.h \
- /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
- /usr/include/bits/posix2_lim.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/float.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h \
/usr/include/bits/nan.h /usr/include/bits/mathdef.h \
/usr/include/bits/mathcalls.h ../inc/config.h \
../inc/../inc/mrcImageOrientationSearchBySimultaneousMinimization.h \
- /home/people/tacyas/Eos/include/genUtil.h \
+ /home/people/tacyas/Eos/include/genUtil.h /usr/include/values.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/limits.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/syslimits.h \
+ /usr/include/limits.h /usr/include/bits/posix1_lim.h \
+ /usr/include/bits/local_lim.h /usr/include/linux/limits.h \
+ /usr/include/bits/posix2_lim.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/float.h \
/home/people/tacyas/Eos/include/Memory.h \
/home/people/tacyas/Eos/include/mrcImage.h \
/home/people/tacyas/Eos/include/genUtil.h \
usage.o: usage.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
util.o: util.c /usr/include/stdio.h /usr/include/features.h \
/usr/include/sys/cdefs.h /usr/include/bits/wordsize.h \
/usr/include/gnu/stubs.h /usr/include/gnu/stubs-64.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stddef.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stddef.h \
/usr/include/bits/types.h /usr/include/bits/typesizes.h \
/usr/include/libio.h /usr/include/_G_config.h /usr/include/wchar.h \
- /usr/lib64/gcc/x86_64-suse-linux/4.4/include/stdarg.h \
+ /usr/lib/gcc/x86_64-redhat-linux/4.4.7/include/stdarg.h \
/usr/include/bits/stdio_lim.h /usr/include/bits/sys_errlist.h \
- /usr/include/stdlib.h /usr/include/sys/types.h /usr/include/time.h \
- /usr/include/endian.h /usr/include/bits/endian.h \
- /usr/include/bits/byteswap.h /usr/include/sys/select.h \
+ /usr/include/stdlib.h /usr/include/bits/waitflags.h \
+ /usr/include/bits/waitstatus.h /usr/include/endian.h \
+ /usr/include/bits/endian.h /usr/include/bits/byteswap.h \
+ /usr/include/sys/types.h /usr/include/time.h /usr/include/sys/select.h \
/usr/include/bits/select.h /usr/include/bits/sigset.h \
/usr/include/bits/time.h /usr/include/sys/sysmacros.h \
/usr/include/bits/pthreadtypes.h /usr/include/alloca.h ../inc/config.h \
+++ /dev/null
-../eosCuda.c
\ No newline at end of file
$(DSTDIR)/$(OSTYPE)/$(OBJECTNAME):$(OSTYPE)/$(OBJECTNAME) $(DSTDIR)/$(OBJECTNAME)
@echo ---- Installing to bin
+ @echo $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
@if [ ! -d $(DSTDIR)/$(OSTYPE) ]; \
then \
mkdir $(DSTDIR)/$(OSTYPE); \
fi
- @if [ -x $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME) ]; \
+ @if [ -x $(OSTYPE)/$(OBJECTNAME) ]; \
then \
+ echo "Compilation is complete"; \
$(RM) -f $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ $(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE); \
+ $(CHMOD) 555 ../$(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ else \
+ echo "Compilation is incomplete. $(OBJECTNAME)"; \
fi
- @$(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE)
- @$(CHMOD) 555 $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
- @echo $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
@echo ---- end of bin
install-wish:
double
lmrcImageDistanceCalc0(mrcImage* out, mrcImage* cor, mrcImage* clusterN, mrcImage* clusterM, int numN, int numM, lmrcImageClusterAnalysisInfo* linfo) {
double distance = 0;
+ mrcImageParaTypeRealCoord offset;
+
+ offset.x = offset.y = offset.z = 0;
DEBUGPRINT("n lmrcImageDistanceCalc0:");
switch(linfo->mode) {
clusterN, clusterM,
numN, numM,
linfo->mode);
- *out = *clusterN;
+ //*out = *clusterN;
+ out->Header = clusterN->Header;
+ mrcInit(out, NULL);
+ lmrcImageCopy(out, clusterN, offset);
cor->Image = NULL;
}
break;
typedef enum lmrc2Dto3DMode {
mrc2Dto3DModeSimpleBackProjection = 0,
- mrc2Dto3DModeFilteredBackProjection = 1
+ mrc2Dto3DModeFilteredBackProjection = 1,
+ mrc2Dto3DModeWeightedBackProjection = 2
} lmrc2Dto3DMode;
typedef struct lmrc2Dto3DInfo {
*/
/* $Log$ */
#include <stdio.h>
+/*
#include <values.h>
-
+*/
#include "Memory.h"
#include "String.h"
#include "../inc/Cluster.h"
+++ /dev/null
-include ../Config/Define.inc
-include Config/Define.inc
-include .Source
-
-include Config/Target.inc
+++ /dev/null
-include ../Config/Define.inc
-include Config/Define.inc
-include .Source
-
-include Config/Target.inc
$(DSTDIR)/$(OSTYPE)/$(OBJECTNAME):$(OSTYPE)/$(OBJECTNAME) $(DSTDIR)/$(OBJECTNAME)
@echo ---- Installing to bin
+ @echo $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
@if [ ! -d $(DSTDIR)/$(OSTYPE) ]; \
then \
mkdir $(DSTDIR)/$(OSTYPE); \
fi
- @if [ -x $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME) ]; \
+ @if [ -x $(OSTYPE)/$(OBJECTNAME) ]; \
then \
+ echo "Compilation is complete"; \
$(RM) -f $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ $(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE); \
+ $(CHMOD) 555 ../$(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ else \
+ echo "Compilation is incomplete. $(OBJECTNAME)"; \
fi
- @$(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE)
- @$(CHMOD) 555 $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
- @echo $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
@echo ---- end of bin
install-wish:
#include <stdlib.h>
#include <string.h>
#include <math.h>
-#include <values.h>
#define GLOBAL_DECLARATION
#include "../inc/config.h"
-/bin/bash: mrcImageClusterAnalysis: No such file or directory
+<HTML>
+<HEAD>
+<TITLE>mrcImageClusterAnalysis</TITLE>
+</HEAD>
+<BODY>
+<H1>mrcImageClusterAnalysis</H1>
+<H2>Usage</H2>
+<PRE>
+Usage: mrcImageClusterAnalysis
+Options:
+ [-I[nput array of file]In (NULL )] :Essential :InputDataFiles
+ [-o[utput] Out (stdout )] :Optional :OutputDataFile
+ [-O[utput] ] :Optional :Output: averaged images: filename is xxxx.avg: xxxx is input filename.
+ [-N[umberOfClusters] N (1 )] :Optional :Number of clusters
+ [-Min[imumCorrelation]Min (0.0 )] :Optional :Minimum: Correlation: Conditions for ending
+ [-Iter[ation] ] :Optional :IterationFlag
+ [-A[uto]R[otation] AutoRotation (72 )] :Optional :AutoRotation: rotation divided by this value
+ [-A[utoRot]Range ARMin (0 )ARMax (360 )] :Optional :AutoRotationRange
+ [-A[uto]R[otation]iter[ation]AutoRotationIteration(2 )] :Optional :AutoRotationIteration
+ [-A[uto]R[otation]MethodAutoRotationMethod (0 )] :Optional :Method for Correlation for Auto Rotation
+ [-M[odeForCorrelation]correlationMode (19 )] :Optional :Correlation Mode for AutoRotation
+ [-pvm ] :Optional :Parallel Analysis by PVM
+ [-pvmList pvmList (NULL )] :Optional :pvmList: Input
+ [-Log Log (stdout )] :Optional :Log: Output
+ [-Log2 Log2 (NULL )] :Optional :Log2: Output: ClusterNode Only
+ [-LogIn LogIn (NULL )] :Optional :previousLog: Input
+ [-prevF[ileNum] prevFileNum (0 )] :Optional :previousLogFileNum: Input
+ [-c[onfig] configFile (NULL )] :Optional :ConfigurationFile
+ [-m[ode] mode (2 )] :Optional :Mode
+----- Additional Usage -----
+Distance between clusters: mode
+ mode 0: By Correlation
+ mode 1: By Euclid Distance
+ mode 2: By Ward Method (default) : Euclid Length (no rotation) or its square (rotation)
+ mode 3: By Ward Method using Linear Correlation : (1 - Correlation)/(1 + Correlation)
+ mode 4: By Linear Correlation : (1 - Correlation)/(1 + Correlation)
+</PRE>
+</BODY>
+</HTML>
then \
mkdir $(DSTDIR)/$(OSTYPE); \
fi
- @if [ -x $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME) ]; \
+ @if [ -x $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME) -a -x $(OSTYPE)/$(OBJECTNAME) ]; \
then \
+ echo "TEST"; \
$(RM) -f $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ $(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE); \
fi
- @$(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE)
@$(CHMOD) 555 $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
@echo $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
@echo ---- end of bin
then \
mkdir $(DSTDIR)/$(OSTYPE); \
fi
- @if [ -x $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME) ]; \
+ @if [ -x $(OSTYPE)/$(OBJECTNAME) ]; \
then \
+ echo "Installing"; \
$(RM) -f $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ $(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE); \
+ else \
+ echo "Compilation is incomplete."; \
fi
- @$(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE)
- @$(CHMOD) 555 $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
+ @$(CHMOD) 555 $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME);
@echo $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
@echo ---- end of bin
then \
mkdir $(DSTDIR)/$(OSTYPE); \
fi
- @if [ -x $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME) ]; \
+ @if [ -x $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME) -a -x $(OSTYPE)/$(OBJECTNAME) ]; \
then \
$(RM) -f $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ $(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE); \
+ $(CHMOD) 555 $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ echo $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME); \
+ echo ---- end of bin ; \
fi
- @$(CD) $(OSTYPE); $(INSTALL) -m 555 $(OBJECTNAME) ../$(DSTDIR)/$(OSTYPE)
- @$(CHMOD) 555 $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
- @echo $(DSTDIR)/$(OSTYPE)/$(OBJECTNAME)
- @echo ---- end of bin
install-wish:
@if [ -d wish ]; \
OBJECTNAME = pdbChargeFit
-EXTRA_LIB =
+EXTRA_LIB = $(LIBCUDA)
EXTRA_CCOPTS =
EXTRA_INC =
tmpPdb.nAtom=0;
- tmpPdb.PDB=NULL;
+ tmpPdb.top = tmpPdb.PDB=NULL;
inFixCA.nAtom=0;
- inFixCA.PDB=NULL;
+ inFixCA.top = inFixCA.PDB=NULL;
inMoveCA.nAtom=0;
- inMoveCA.PDB=NULL;
+ inMoveCA.top = inMoveCA.PDB=NULL;
lengthV=floatVectorInit(lengthV,3);
fprintf(stderr, "-m Option\n");
fprintf(stderr, " %d:SimpleBackProjection\n", mrc2Dto3DModeSimpleBackProjection);
fprintf(stderr, " %d:FilteredBackProjection\n", mrc2Dto3DModeFilteredBackProjection);
+ fprintf(stderr, " %d:WeightedBackProjection\n", mrc2Dto3DModeWeightedBackProjection);
fprintf(stderr, "-single 0|1 \n");
fprintf(stderr, " 0: tilt axis is parallel to x-axis\n");
fprintf(stderr, " 1: tilt axis is parallel to y-axis\n");
#
*/
#include <stdio.h>
-#include <values.h>
#include <stdlib.h>
#include <string.h>
#include <math.h>
-/bin/bash: mrcImageOrientationSearchBySimultaneousMinimization: No such file or directory
+<HTML>
+<HEAD>
+<TITLE>mrcImageOrientationSearchBySimultaneousMinimization</TITLE>
+</HEAD>
+<BODY>
+<H1>mrcImageOrientationSearchBySimultaneousMinimization</H1>
+<H2>Usage</H2>
+<PRE>
+Usage: mrcImageOrientationSearchBySimultaneousMinimization
+Options:
+ [-I[nputFileList] In (NULL )] :Essential :InputDataFileList
+ [-o[utput] Out (NULL )] :Essential :OutputDataFile
+ [-c[onfig] configFile (NULL )] :Optional :ConfigurationFile
+ [-m[ode] mode (0 )] :Optional :Mode
+ [-dt[heta] dtheta (1 )] :Optional :dtheta
+ [-dp[si] dpsi (1 )] :Optional :dpsi
+ [-m[odeof]s[election]ms (0 )] :Optional :modeofselection
+ [-i[nitial]r[andom]d[ata]ird (1 )] :Optional :InitialRandomData
+ [-M[ax]C[ount] MC (100 )] :Optional :MaxCount
+ [-F[ileName]H[eader] FileNameHeader (EulerAngle)] :Optional :FileNameHeader
+ [-m[odeof]i[nitial]d[ada]mid (0 )] :Optional :modeofinitialdata
+ [-i[nputFile]i[nitial]d[ata]InInitial (NULL )] :Optional :InputDataFileOfInitialData
+ [-m[odeof]s[tart]p[oint]msp (0 )] :Optional :mode of start point
+ [-m[odeof]a[ngular]a[rea]maa (0 )] :Optional :mode of angular area
+ [-p[revious]dt[heta] pdtheta (0 )] :Optional :previous dtheta
+ [-p[revious]dp[si] pdpsi (0 )] :Optional :previous dpsi
+ [-m[ode]L[calculation]modeL (0 )] :Optional :Mode of L calculation
+ [-m[ode]T[hreshold]A[ngularweight]modeTA (0 )] :Optional :Mode of Threshold of AngularWeight
+ [-m[ode]c[alculation]a[rea]modeCA (0 )] :Optional :mode of Lvalue of calculation area
+ [-t[hreshold]c[alculation]a[rea]TCA (0 )] :Optional :Threshold of Lvalue of calculation area
+ [-m[ode]f[ix] modeF (0 )] :Optional :mode of fix
+
+----- ModeSelection -----
+-ms : 0 : random
+ : 1 : myself (-ird)
+
+----- Mode --------------
+-m : 0 : input data --> sinogram
+ : 1 : --> sinogramFT
+
+----- Angle -------------
+-dt : DEGREE
+-dp : DEGREE
+-pdt : DEGREE
+-pdp : DEGREE
+
+----- ModeOfInitialData -------------
+-mid : 0 : There is not initial data
+ 1 : There is initial data (-iid)
+
+----- ModeOfLcalculation -------------
+-mL : 0 : differential of length
+ 1 : differential of phase
+ 2 : addition to derivation1D (multiply)
+ 3 : addition to derivation1D (difference)
+
+----- ModeOfThresholdAngularWeight -------------
+-mTA : 0 : 1.0e-4
+ 1 : 1 degree
+ 2 : dpsi
+
+----- ModeOfStartPoint -------------
+-msp : 0 : origin
+ 1 : initial data (-iid)
+
+----- ModeOfAngularArea -------------
+-maa : 0 : all area
+ 1 : aroud previous delta (-pdt -pdp)
+
+----- ModeOfCalculationArea -------------
+-mca : 0 : all area
+ 1 : cut under -tca(1/angstrom)
+
+----- ModeOfFix -------------
+-mf : 0 : don't fix one plane
+ 1 : fix one plane (first file is fixed)
+
+</PRE>
+</BODY>
+</HTML>