From cb21b3efd656be43c32a426b10844d0c26fa0601 Mon Sep 17 00:00:00 2001 From: kinoshita-eos Date: Thu, 20 Nov 2014 14:30:59 +0900 Subject: [PATCH] Modify: tutorial3 for PIONE-package(About Creating Annotation File) new file: SampleCode/PIONE/Package3/Annotation.pione modified: SampleCode/PIONE/Package3/Main.pione deleted: SampleCode/PIONE/Packages/CenterGet(Kinoshita)+v0.0.3.ppg new file: SampleCode/PIONE/Packages/CenterGet(Kinoshita)+v0.0.4.ppg Add: tutorail4 for PIONE-package new file: SampleCode/PIONE/Package4/Annotation1.0.pione new file: SampleCode/PIONE/Package4/Initial2.pione new file: SampleCode/PIONE/Packages/CenterGet(Kinoshita)+v0.1.0.ppg --- SampleCode/PIONE/Package3/Annotation.pione | 3 +++ SampleCode/PIONE/Package3/Main.pione | 4 ---- SampleCode/PIONE/Package4/Annotation1.0.pione | 3 +++ SampleCode/PIONE/Package4/Initial2.pione | 12 ++++++++++++ .../PIONE/Packages/CenterGet(Kinoshita)+v0.0.3.ppg | Bin 1669 -> 0 bytes .../PIONE/Packages/CenterGet(Kinoshita)+v0.0.4.ppg | Bin 0 -> 1795 bytes .../PIONE/Packages/CenterGet(Kinoshita)+v0.1.0.ppg | Bin 0 -> 1896 bytes 7 files changed, 18 insertions(+), 4 deletions(-) create mode 100644 SampleCode/PIONE/Package3/Annotation.pione create mode 100644 SampleCode/PIONE/Package4/Annotation1.0.pione create mode 100644 SampleCode/PIONE/Package4/Initial2.pione delete mode 100644 SampleCode/PIONE/Packages/CenterGet(Kinoshita)+v0.0.3.ppg create mode 100644 SampleCode/PIONE/Packages/CenterGet(Kinoshita)+v0.0.4.ppg create mode 100644 SampleCode/PIONE/Packages/CenterGet(Kinoshita)+v0.1.0.ppg diff --git a/SampleCode/PIONE/Package3/Annotation.pione b/SampleCode/PIONE/Package3/Annotation.pione new file mode 100644 index 0000000..a2fa625 --- /dev/null +++ b/SampleCode/PIONE/Package3/Annotation.pione @@ -0,0 +1,3 @@ +.@ PackageName :: "CenterGet" +.@ Editor :: "Kinoshita" +.@ Tag :: "v0.0.4" diff --git a/SampleCode/PIONE/Package3/Main.pione b/SampleCode/PIONE/Package3/Main.pione index c5fc996..e8de3a0 100644 --- a/SampleCode/PIONE/Package3/Main.pione +++ b/SampleCode/PIONE/Package3/Main.pione @@ -1,7 +1,3 @@ -.@ PackageName :: "CenterGet" -.@ Editor :: "Kinoshita" -.@ Tag :: "v0.0.3" - Rule Main input '*.mrc'.all output '*.roi' diff --git a/SampleCode/PIONE/Package4/Annotation1.0.pione b/SampleCode/PIONE/Package4/Annotation1.0.pione new file mode 100644 index 0000000..94fe6fa --- /dev/null +++ b/SampleCode/PIONE/Package4/Annotation1.0.pione @@ -0,0 +1,3 @@ +.@ PackageName :: "CenterGet" +.@ Editor :: "Kinoshita" +.@ Tag :: "v0.1.0" diff --git a/SampleCode/PIONE/Package4/Initial2.pione b/SampleCode/PIONE/Package4/Initial2.pione new file mode 100644 index 0000000..7c0ea5d --- /dev/null +++ b/SampleCode/PIONE/Package4/Initial2.pione @@ -0,0 +1,12 @@ +Rule Initial + input '*.mrc' + output '{$I[1][1]}.parameters' +Action + mrcInfo -i {$I[1]} \ + | head -1 \ + | awk '{printf("%s %s %s", $4, $5, $6)}' \ + | tr -c '[0-9]' ' ' \ + > TMP + awk '{printf("%d %d %d", $1*4/5, $2*4/5, $3*4/5)}' TMP \ + > {$O[1]} +End diff --git a/SampleCode/PIONE/Packages/CenterGet(Kinoshita)+v0.0.3.ppg b/SampleCode/PIONE/Packages/CenterGet(Kinoshita)+v0.0.3.ppg deleted file mode 100644 index ee41bf9ecf757b747cbf007704afc2c6b3df6c40..0000000000000000000000000000000000000000 GIT binary patch literal 0 HcmV?d00001 literal 1669 zcmWIWW@Zs#U|`^2FbFGgUBmof;F-e=9Cyl)yb&4eYpH#aq0L2sP z{lbQefR29;^aMAMcFW95%+UjTgaXK2CcGu~$&K00$oTSGT6;QFQ0x?W-J#j8VY z7V{=It_WMNVK1yPFFvYCC2)22ittG@r?sgiwsm2F(Rc5=1t@G)(X z%|3&0Cs_m23Uo(uHCejtW;rKq?B z;uYOqTmB{k5!dJ6!tV(9T#Zm#(cInHtTxvtX5zw!&e97f1U*vtQ_el(`@0W*e)sm4 zr}nKjTD#Qc<+9BQuNN3;E?)BPO-X&NVEah{jo2$a^MY4r`F0k&sLtP6AQID{{m0ct z6OWi1+*SQbg$9&Ukzj`3;y3_{|oqL~>4;l0w zRu3>mD{hUe{hj`< zX#2S>cIy4l7>+~<+E0?$UF4jzhWY(gF3)LtY@7b;TqzB^ZntMk*Zh9j$pSxGv$_`R z{A}`l@J+o!DpYtsBWn1GTyH*n1?b}6zy!?$q=QqF^Yc<5ZtuN#kgLf-fbGHN-y+Tu zVJQjotXo`4ZZ7CkRor$o=-sJpL3uyk_0Dt(dXQW9T(~aH{N~hy(~btobRKn`m0936 z+2yF8@ceIC&s&eSbWhHyuhqZg;mUd0=Wc`i>=@bkNgPFwH!|G!@P=l`qvfBUjt=pX*K7Zxp()Ub%$p;w>eY(*w#W*lF}3Qcxru^)Hz zQGKtml`~Qa=xYTaW(Q)ul+5(h;u7NxCI*{LybQg({me`}P0YN!O^i&8%*;%Uj6J-} zHh6%t5+jodGw#9-Xchx7L>ZPef>@YE9lCz>as{LdqW>t6g;dI*Yedh*2#phf`rR_& zc^X|Kdd5L$3}ZseM(A46Q#(TI9iUc3+DF%ip4JfhrZJjHQKekWgd{H#mK-Q1f&Zx^Yc=53lfvF6Vp@mvWoNbV$a!f zA9CPfd$4!^qaBf6?CR$Bt2#7VcXc}NXp`E~8MC|NRJ+Q|v7YA^7_?+|e@&D?5#`o!# zO+f)gerL5kb&LFU10P)~4k++FsdG~Q5zFa{^k+}S(^ICYG^IKTUA9zwl*(4cR;A_@ z!+>g|dcUyYBA`w0f#Jsuq}?*}5_2GyaciCR3@tc)#{0~}M`zAxYv=|BT)%W$*DI{O zcy*}FV&3G&6=CZ&?1eSv#YZ)%1g_3r5k6_=v^KTG7H_5{hdHM6&1gw3@=U9f6IZ{W zIB#d?%ax3-KOvgdf|kiM+$$+xo3QT_rcHa z-rn-mzSTx+m%6-MwmIST0wc}EOWwUHsjn4mKPjLQd!=Vy@ainz&SDqU`8x|lVj8sn zxY}sE{CFyrO>SZP)Kx6}={olL-!~e1-A;O`8|Cvl_rd#^Z+h)l52Rg}`XHin?^E(2 zgTBM+;l~Vu%kxE(m(byqk%q10%Beu_RPyH$wY~g4`)v6ob*ADl;@Am=<70m zM#PN5Mh!#rttwkrM9e*HxKqX0zQ5bp)KWR#@#GN)#tt9eDI#w~R)zj?T(vXibI=a7 zux$I7l@boLy$XoAfY>)N6Pg6Usp5n0nKO@36UBA!Gbe%RL|?bDOY~{_D&^1KMwc&L z*?Fhv)9IZS-41CL&r+wQs6BJ2%$wE3N^UObQ&rq{H0a%_Z9#cI z-u2FO3VM)R_guIx&HU!ngVT-%$#fodot0VOHreH$ar;^{!F&%ho3)t;3aeYeWAb3X*6ftCuUDcHu5!^x@<)zXJ#B<#tKb#XR#l5^ih+*#`%^GN!oC-rxuqO z8~d4>dHEXq8ygvzn0T6OH}N;~@GocAkI)*|C#J=nYd(T+&3(vr`MyE=ka%(iIBzK}5cgz2u1|97*srrg93x$;`q9MC>ePYur&b>~6H?Ed109LL2riBpC@quRG52Q?L$U11jBS9Mp9`LpJ~M)`>co^Jhm zo$ixX{r3LylPLhjLvJHjc)I{S;tRyWK8mtT@t0`!)lo`D|NdzXs?I6QpL`T6*N z^*-bKbjzlofFi%M+Mc>a{;;T4IYg(~`p+)A?q!Bo}$6 z)yavgUr?O4v-9OjM%SN_D-#S^@A|N=Fyz|x(_q=WK(2_5f*#hBgcex1OttTDpH$h# zwQDC=+YTSo7Rl_M`w_}58{I7CWVSr=Q5HIT_^FR_Nct>>-qN$)51G)sa_@-m>A65J z><40qSBi>DAYRe!wdHRz5OIC}E&Psv&(#Q}70un9&1!RfVkRzp=q$Z(LeL|HKjqvr zzQ6n6=XY;!d1~KkqqR$2UM}05@Opuf=Heyq-jvkW3bvmV(1^X#GcR~`mTzaVi|YKH z1tKvG+J9VaG+ur@mC7c!uzl((7XEY{`~2@44ZUtBz0{5Jd7b;FgJ->0j7UBZS%Xe%)4}4}JnM9}s)yWtL_t{GL6#oQ{3KPX?0zP$UULrj?V0?7#}uHQ8oqtj{|e*f&cD6ifg zI8B)C;-#W%_V**U`xHNC*jvBx{=>;r=_SpbEwRl>3UQ( zpsXOPs4k8xMu~sL3DFbmXsJZxdh_8cKx=;k6Fd))4o*$Z&r5+gp!ecIt|kWowg;Pk zi#SV!r6kO=ZgDBOxu8!~aof?Lcc-=m<^6cqJJTuXL2li1;kq>Qn^O-?I~pX@dDL}Q zW`Wyem!p2d^S@<1Z#~-5JvpboR{xTRE9YgOy9K(&ckgMRlr`!%o!%6|D6GNXKhw73 zop{O0M^5wE_WsM&uS(vqH}Rpv&+jHWZN2CJ|9a`4|F7!*?aO+hfB4^CShP%*D?}uJ zuh$~u)m{2C*`^