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molby/Molby.git
2012-07-05 toshinagata1964Experimental: trying to implement minimizaion of cell...
2012-07-05 toshinagata1964Handling of flexible cells were still inconsistent.
2012-07-04 toshinagata1964Molecule#cell_flexibility and set_cell_flexibility...
2012-07-04 toshinagata1964Figures for the Ruby tutorial are added to the repository.
2012-07-04 toshinagata1964Handling of periodic box during MD is being reworked.
2012-07-04 toshinagata1964Ruby: Molecule#box= was not working as expected. Fixed.
2012-07-04 toshinagata1964Memory leak bugs are examined and removed.
2012-07-04 toshinagata1964amend_by_symmetry in MD was still broken. Hopefully...
2012-07-03 toshinagata1964Tutorial for the Ruby interpreter was (finally) written.
2012-07-03 toshinagata1964amend_by_symmetry during MD run was causing crash....
2012-07-02 toshinagata1964Graphite potential calculation is further modified...
2012-06-30 toshinagata1964When no molecule is open, Ruby scripts are evaluated...
2012-06-29 toshinagata1964Improving graphite potential calculation (hopefully...
2012-06-29 toshinagata1964Graphite potential calculation is improved.
2012-06-29 toshinagata1964The graphite potential calculation is being reworked.
2012-06-29 toshinagata1964The current working directory is set to the document...
2012-06-29 toshinagata1964The anisotropic parameters for the symmetry expanded...
2012-06-29 toshinagata1964Pressure control and surface potential are removed...
2012-06-28 toshinagata1964The load commands can now include error messages in...
2012-06-28 toshinagata1964MD minimize was not working properly (especially for...
2012-06-28 toshinagata1964Symmetry expansion in CIF import is improved. (May...
2012-06-27 toshinagata1964Molecule#expand_by_symmetry now returns an array of...
2012-06-27 toshinagata1964Molecule#symop_for_transform and transform_for_symop...
2012-06-26 toshinagata1964Molecule#is_atom_hidden and AtomRef#hidden, hidden...
2012-06-26 toshinagata1964Molecule#set/get_view_rotation: the sign of the angle...
2012-06-25 toshinagata1964The restriction on the number of bonds (12) is removed...
2012-06-22 toshinagata1964Include periodicity flags in the 'define unit cell...
2012-06-21 toshinagata1964Problem on guessing UFF angle parameter was fixed.
2012-06-21 toshinagata1964Fixed a very stupid bug in drawing unit cell.
2012-06-21 toshinagata1964Handling of frame-specific cell parameters was very...
2012-06-20 toshinagata1964Graphite potential in MM/MD gets recalculated much...
2012-06-20 toshinagata1964Building verlet list seems to be working. Handling...
2012-06-20 toshinagata1964Building verlet list is being reworked to implement...
2012-06-20 toshinagata1964Symmetry operations from the CIF file were not read...
2012-06-19 toshinagata1964Mac (only 10.6?): when the graphite display is on,...
2012-06-18 toshinagata1964Version 0.6.3
2012-06-18 toshinagata1964Features of Molecule#cell and Molecule#box are modified...
2012-06-18 toshinagata1964Mbsf format now retains anisotropic parameters and...
2012-06-18 toshinagata1964Crash during creating bonds when ellipsoid display...
2012-06-17 toshinagata1964Ruby: Molecule#fit_coordinates seems to be working...
2012-06-16 toshinagata1964Ruby: Molecule#fit_coordinates is being implemented...
2012-06-15 toshinagata1964LAMatrix#new, #zero, #submatrix now accept arguments...
2012-06-14 toshinagata1964MM forces are updated even after 'run(0)'
2012-06-14 toshinagata1964Load/save mbsf files were broken when atom type variant...
2012-06-13 toshinagata1964The order of parameters in cmd_edit_local_parameter_in_...
2012-06-07 toshinagata1964Molecule#transform, rotate, invert, etc. are now aware...
2012-06-06 toshinagata1964MoleculeGetTransformForSymop() and MoleculeGetSymopForT...
2012-06-06 toshinagata1964Ruby: AtomRef#symop can now be set from script.
2012-06-06 toshinagata1964Ruby: Molecule#amend_by_symmetry is implemented.
2012-06-04 toshinagata1964Ruby: Molecule#set(get)_view_translation is now obsolet...
2012-06-04 toshinagata1964Undoing change in revision 207 (forgot to commit differ...
2012-06-04 toshinagata1964The order of the anisotropic thermal parameters is...
2012-06-04 toshinagata1964Ruby: Molecule#hidden_atoms and Molecule#set_hidden_ato...
2012-05-09 toshinagata1964The order of columns for MD parameters in the bond...
2012-05-09 toshinagata1964UFF parameter guess is implemented.
2012-05-09 toshinagata1964Molecule.neutralize was not working correctly. Fixed...
2012-05-08 toshinagata1964Fix the position of load/unload global parameters dialog.
2012-05-08 toshinagata1964Windows version does not display last build date in...
2012-05-08 toshinagata1964MyAppCallback_lookupScriptMenu() is added to cmdtool_st...
2012-05-08 toshinagata1964Parameters now can be specified by using both explicit...
2012-05-08 toshinagata1964Parameter editing is under overhaul.
2012-05-07 toshinagata1964Handling of parameters are being improved, but still...
2012-05-07 toshinagata1964Handling of parameters is being reworked (still going on)
2012-05-07 toshinagata1964Restructure MolAction.c
2012-05-07 toshinagata1964Atom range specification for the vdw cutoff parameter...
2012-05-03 toshinagata1964LAMatrix.html was added to the repository.
2012-05-03 toshinagata1964Vector3D[] and Transform[] are modified to accept an...
2012-05-03 toshinagata1964Load Script Menu caused crash when no window is open...
2012-05-03 toshinagata1964Ruby: Kernel.lookup_menu is implemented.
2012-05-03 toshinagata1964LAMatrix.multiply was not working correctly when on...
2012-05-02 toshinagata1964Execute Script command was broken. Fixed.
2012-03-29 toshinagata1964CIF import may fail when _geom_bond_site_symmetry_1...
2012-03-01 toshinagata1964Figures for the document are added
2012-02-26 toshinagata1964Document was written for the collaboration with other...
2012-02-26 toshinagata1964.log and .out are both accepted as the extension of...
2012-02-11 toshinagata1964update_version.rb is improved.
2012-02-11 toshinagata1964version 0.6.2
2012-02-01 toshinagata1964Document is updated to include new graphic objects...
2012-01-31 toshinagata1964Ruby: Molecule#make_front, set_name, get_view_rotation...
2012-01-30 toshinagata1964Drawing custom graphics on the model view is being...
2012-01-30 toshinagata1964Ruby Dialog: modeless dialog is now implemented; interv...
2012-01-17 toshinagata1964Dialog#layout: the :align and :vertical_align options...
2012-01-17 toshinagata1964The separator line in the Ruby Dialog was not working...
2012-01-17 toshinagata1964Vector3D and Transform objects are converted to LAMatri...
2012-01-16 toshinagata1964LAMatrix#new errornously allows matrix with dimension...
2012-01-16 toshinagata1964AtomRef#molecule is implemented.
2012-01-16 toshinagata1964Empty Console Window command is implemented.
2012-01-13 toshinagata1964LAMatrix.multiply was not working correctly when the...
2011-12-22 toshinagata1964General matrix calculation (LAMatrix class in Ruby...
2011-12-21 toshinagata1964Some of the document figures are updated.
2011-12-21 toshinagata1964General matrix calculation is being implemented (still...
2011-12-20 toshinagata1964Figures in the MD section of the document are added.
2011-12-20 toshinagata1964In the document, navigation between the English/Japanes...
2011-12-20 toshinagata1964Document for MD calculation is written.
2011-12-19 toshinagata1964The "log file" field is set to blank unless explicitly...
2011-12-19 toshinagata1964Document for MD calculation is being written.
2011-12-07 toshinagata1964The structure Mat33 and Transform are now column-first...
2011-11-30 toshinagata1964Rms of crystallographic parameters (from the CIF file...
2011-11-30 toshinagata1964Memo update for 0.6.1; also updated molby.iss for build...
2011-11-26 toshinagata1964Version 0.6.1
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