-/bin/bash: pdb2mrc2d: そのようなファイルやディレクトリはありません
+<HTML>
+<HEAD>
+<TITLE>pdb2mrc2d</TITLE>
+</HEAD>
+<BODY>
+<H1>pdb2mrc2d</H1>
+<H2>Usage</H2>
+<PRE>
+Usage: pdb2mrc2d
+Options:
+ [-i[nput] In (NULL ).as(inFile ) ] :Essential :InputDataFile
+ [-o[utput] Out (NULL ).as(outFile ) ] :Optional :OutputDataFile(2D)
+ [-O[utput] Out3D (NULL ).as(outFile ) ] :Optional :OutputDataFile(3D)
+ [-d[elta] dx (5.0 ).as(Real )
+ dy (5.0 ).as(Real ) ] :Essential :delta: dx[A] dy[A]
+ [-s[tart] sx (0.0 ).as(Real )
+ sy (0.0 ).as(Real ) ] :Optional :start: startx[A] starty[A]: When -s was not set, image centre is the origin(0,0,0)
+ [-n[umber] nx (0 ).as(Integer )
+ ny (0 ).as(Integer ) ] :Essential :N: nx ny (image size)
+ [-Rot[ation] rotnx (1 ).as(Integer )
+ rotny (1 ).as(Integer ) ] :Optional :rotnx rotny
+ [-S[tart] srotx (0.0 ).as(Real )
+ sroty (0.0 ).as(Real )
+ srotz (0.0 ).as(Real ) ] :Optional :start(rotx roty rotz):ZXY
+ [-startE[uler]A[ngle]sRotMode (YOYS ).as(String )
+ sRot1 (0.0 ).as(Real )
+ sRot2 (0.0 ).as(Real )
+ sRot3 (0.0 ).as(Real ) ] :Optional :EulerAngle: Start Angle
+ [-E[uler]A[ngle]Mode RotMode (YOYS ).as(String ) ] :Optional :RotationMode
+ [-E[uler]A[ngle]Rot1 dRot1 (5.0 ).as(Real )
+ minRot1 (0.0 ).as(Real )
+ maxRot1 (180.0 ).as(Real ) ] :Optional :FirstRotation
+ [-E[uler]A[ngle]Rot2 dRot2 (5.0 ).as(Real )
+ minRot2 (0.0 ).as(Real )
+ maxRot2 (180.0 ).as(Real ) ] :Optional :SecondRotation
+ [-w[eight] Weight (1.0 ).as(Real ) ] :Optional :weight
+ [-sig[ma] Sigma (0.0 ).as(Real ) ] :Optional :Sigma[A]:Atom radius
+ [-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
+ [-cuda cudaDeviceID (0 ).as(Integer ) ] :Optional :UseCuda
+ [-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode: 0 Merc; 1: Earth
+----- Attention1 -----
+If both of -s and -startEA, first -s and second -startEA will be performed
+----- Attention2 -----
+Bug fixed: rotation around x-axis. + is changed to -
+----- Mode -----
+1: 0: equal angle 1: equal area
+2: 0: Mercatol 1: Morwide
+</PRE>
+</BODY>
+</HTML>
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