doc/SmallTools/mrcImageBinalization.html

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   2 <HEAD>
   3 <TITLE>mrcImageBinalization</TITLE>
   4 </HEAD>
   5 <BODY>
   6 <H1>mrcImageBinalization</H1>
   7 <H2>Usage</H2>
   8 <PRE>
   9 Usage: mrcImageBinalization
  10 Options:
  11     [-i[nput]            In                  (NULL      ).as(inFile::mrcImage    ) ] :Essential :Input:mrcImage
  12     [-o[utput]           Out                 (NULL      ).as(outFile::mrcImage   ) ] :Essential :Output:mrcImage
  13     [-O[utput]           OutParam            (stdout    ).as(outFile::ASCII      ) ] :Optional  :Output:Parameters
  14     [-t[hreshold]        t                   (0         ).as(Real                ) ] :Optional  :Value of threshold
  15     [-d[elta]t[hreshold] deltaThreshold      (0         ).as(Real                ) ] :Optional  :Difference threshold
  16     [-s[igma]t[hreshold] sigmaThreshold      (0.5       ).as(Real                ) ] :Optional  :Sigma threshold(BandPath)
  17     [-v[alue]            v                   (0         ).as(Real                ) ] :Optional  :Value
  18     [-near               near                (0         ).as(Real                ) ] :Optional  :Near[pixel]: Near-area also binary
  19     [-nLevel             nLevel              (256       ).as(Integer             ) ] :Optional  :nLevel: For creating histgram by Kittler and Ohtsu
  20     [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
  21     [-p[tile]            p                   (0.5       ).as(Real                ) ] :Optional  :p
  22     [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
  23 ----- Additional Usage -----
  24 ----- Additional Usage -----
  25 mode 0: Under thresHold, 0.     Above thresHold, 1.
  26      1: Above thresHold, 0.     Under thresHold, 1.
  27      2: Under thresHold, value. Above thresHold, unchanged.
  28      3: Above thresHold, value. Under thresHold, unchanged.
  29      4: thresHold +- sigma, 1.     Others 0.
  30      5: thresHold +- sigma, 0.     Others 1.
  31      6: thresHold +- sigma, unchanged. Others value.
  32      7: thresHold +- sigma, value.     Others unchanged.
  33      +16: Automatically Determine threshold by Kittler Method
  34      +32: Automatically Determine threshold by Ohtsu Method
  35      +48: Automatically Determine threshold by p-tile Method
  36           p range: 0.0 - 1.0
  37      +64: Automatically Determine threshold by Differential-Histogram Method
  38      +80: Automatically Determine threshold by Laplacian-Histogram Method
  39 </PRE>
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