OSDN Git Service
久永浩司 [Tue, 17 Nov 2015 11:59:24 +0000 (20:59 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
久永浩司 [Tue, 17 Nov 2015 11:57:33 +0000 (20:57 +0900)]
Changes to be committed:
modified: include/eosBayes.h
modified: src/Objects/General/eosBayes/doc/eosBayes.html
modified: src/Objects/General/eosBayes/inc/eosBayes.h
new file: src/Objects/General/eosBayes/src/eosBayesEstimation.c
new file: src/Objects/General/eosBayes/src/eosBayesEstimation.c~
new file: src/Objects/General/eosBayes/src/eosBayesRead.c
new file: src/Objects/General/eosBayes/src/eosBayesRead.c~
modified: src/Tools/.Source.org
modified: src/Tools/Config/Define.inc
typechange: src/Tools/Makefile
modified: src/Tools/Test/.Source
modified: src/Tools/Test/.Source.org
typechange: src/Tools/Test/Makefile
new file: src/Tools/Test/hisanaga/Config/Define.inc
new file: src/Tools/Test/hisanaga/Config/OptionControlFile
new file: src/Tools/Test/hisanaga/Config/OptionControlFile~
new file: src/Tools/Test/hisanaga/Config/Target.inc
new file: src/Tools/Test/hisanaga/Makefile
new file: src/Tools/Test/hisanaga/doc/Makefile
new file: src/Tools/Test/hisanaga/inc/config.h
new file: src/Tools/Test/hisanaga/inc/hisanaga.h
new file: src/Tools/Test/hisanaga/src/.Depend
new file: src/Tools/Test/hisanaga/src/.Source
new file: src/Tools/Test/hisanaga/src/Makefile
new file: src/Tools/Test/hisanaga/src/X86MAC64
new file: src/Tools/Test/hisanaga/src/argCheck.c
new file: src/Tools/Test/hisanaga/src/hisanaga.c
new file: src/Tools/Test/hisanaga/src/hisanaga.c~
new file: src/Tools/Test/hisanaga/src/hisanaga.pane
new file: src/Tools/Test/hisanaga/src/init.c
new file: src/Tools/Test/hisanaga/src/test/Makefile
new file: src/Tools/Test/hisanaga/src/test/Makefile~
new file: src/Tools/Test/hisanaga/src/test/data
new file: src/Tools/Test/hisanaga/src/usage.c
new file: src/Tools/Test/hisanaga/src/util.c
modified: src/Tools/eosBayes/.Source.org
Takuo Yasunaga [Mon, 16 Nov 2015 23:25:16 +0000 (08:25 +0900)]
modified: env/install-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 23:24:20 +0000 (08:24 +0900)]
Merge git.osdn.jp:/gitroot/eos/base
Takuo Yasunaga [Mon, 16 Nov 2015 23:23:20 +0000 (08:23 +0900)]
modified: env/Eos_env
modified: env/install-eos.sh
modified: env/update-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 23:20:36 +0000 (08:20 +0900)]
modified: env/Eos_env
modified: env/install-eos.sh
modified: env/update-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 23:17:30 +0000 (08:17 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Mon, 16 Nov 2015 23:16:55 +0000 (08:16 +0900)]
modified: Integration/2DClustering/test/all.logps
modified: env/Eos_env
modified: env/install-eos.sh
modified: env/update-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 22:47:29 +0000 (07:47 +0900)]
update install-eos.sh
modified: env/install-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 22:05:41 +0000 (07:05 +0900)]
Bug fixed: modified
modified: bin/wish/Display2/Display2.wish
modified: bin/wish/Display2/Display2Init.wish
modified: bin/wish/Display2/LayerLineUtil.wish
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
Takuo Yasunaga [Sat, 14 Nov 2015 05:04:52 +0000 (14:04 +0900)]
mrcImageFeatureCalc: modified
modified: include/lmrcImageFeatureCalc.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSurfaceAreaCalc.c
Takuo Yasunaga [Fri, 13 Nov 2015 02:15:11 +0000 (11:15 +0900)]
Please enter the commit message for your changes. Lines starting
with '#' will be ignored, and an empty message aborts the commit.
On branch master
Changes to be committed:
modified: bin/wish/ctfDisplay/ctfDisplay.wish
modified: bin/wish/ctfDisplay/tclIndex
modified: include/bildFile.h
modified: src/Objects/DataExpress/Makefile
modified: src/Objects/DataExpress/TclTk/src/.Wish
modified: src/Objects/DataExpress/TclTk/src/CommandEntry.wish
new file: src/Objects/DataExpress/TclTk/src/defaultLoad.wish
new file: src/Objects/DataExpress/pngFile/Config/Define.inc
new file: src/Objects/DataExpress/pngFile/Config/Target.inc
new file: src/Objects/DataExpress/pngFile/Makefile
new file: src/Objects/DataExpress/pngFile/doc/.footer
new file: src/Objects/DataExpress/pngFile/doc/.header
new file: src/Objects/DataExpress/pngFile/doc/.pngFile.html
new file: src/Objects/DataExpress/pngFile/doc/Makefile
new file: src/Objects/DataExpress/pngFile/inc/Makefile
new file: src/Objects/DataExpress/pngFile/inc/pngFile.h
new file: src/Objects/DataExpress/pngFile/inc/pngFile.h.org
new file: src/Objects/DataExpress/pngFile/src/.CCHeader
new file: src/Objects/DataExpress/pngFile/src/.CHeader
new file: src/Objects/DataExpress/pngFile/src/.Ruby
new file: src/Objects/DataExpress/pngFile/src/.Wish
new file: src/Objects/DataExpress/pngFile/src/Makefile
new file: src/Objects/DataExpress/pngFile/src/X86MAC64
modified: src/Objects/DataManip/bildFile/doc/bildFile.html
modified: src/Objects/DataManip/bildFile/inc/bildFile.h
modified: src/Objects/DataManip/bildFile/src/lmrc2bild.c
modified: src/Objects/Makefile
modified: src/Objects/Makefile.org
modified: src/Tools/Config/Define.inc
modified: src/Tools/Integration/ctfDisplay/src/wish/ctfDisplay.wish
typechange: src/Tools/Makefile
modified: src/Tools/filter/.Source
modified: src/Tools/filter/mrc2bild/Config/OptionControlFile
modified: src/Tools/filter/mrc2bild/inc/mrc2bild.h
modified: src/Tools/filter/mrc2bild/src/argCheck.c
modified: src/Tools/filter/mrc2bild/src/init.c
modified: src/Tools/filter/mrc2bild/src/mrc2bild.c
modified: src/Tools/filter/mrc2bild/src/mrc2bild.html
modified: src/Tools/filter/mrc2bild/src/mrc2bild.pane
modified: src/Tools/filter/mrc2bild/src/test/Makefile
modified: src/Tools/filter/mrc2bild/src/usage.c
new file: src/Tools/filter/mrc2png/Config/Define.inc
new file: src/Tools/filter/mrc2png/Config/OptionControlFile
new file: src/Tools/filter/mrc2png/Config/Target.inc
new file: src/Tools/filter/mrc2png/Makefile
new file: src/Tools/filter/mrc2png/doc/Makefile
new file: src/Tools/filter/mrc2png/inc/config.h
new file: src/Tools/filter/mrc2png/inc/mrc2png.h
new file: src/Tools/filter/mrc2png/src/.Depend
new file: src/Tools/filter/mrc2png/src/.Source
new file: src/Tools/filter/mrc2png/src/Makefile
new file: src/Tools/filter/mrc2png/src/X86MAC64
new file: src/Tools/filter/mrc2png/src/argCheck.c
new file: src/Tools/filter/mrc2png/src/init.c
new file: src/Tools/filter/mrc2png/src/mrc2png.c
new file: src/Tools/filter/mrc2png/src/mrc2png.pane
new file: src/Tools/filter/mrc2png/src/usage.c
new file: src/Tools/filter/mrc2png/src/util.c
modified: src/Tools/mrcImage/mrcImageAreaCalc/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageAreaCalc/src/mrcImageAreaCalc.html
modified: src/Tools/mrcImage/mrcImageAreaCalc/src/mrcImageAreaCalc.pane
modified: src/Tools/mrcImage/mrcImageAreaCalc/src/usage.c
Takuo Yasunaga [Thu, 12 Nov 2015 22:32:51 +0000 (07:32 +0900)]
Bug fixed:
modified: Makefile
modified: src/Tools/Integration/Display2/src/wish/Display2.wish
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified: src/Tools/Integration/Display2/src/wish/LayerLineUtil.wish
modified: src/Tools/Integration/Display2/src/wish/tclIndex
久永浩司 [Wed, 11 Nov 2015 10:37:52 +0000 (19:37 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
久永浩司 [Wed, 11 Nov 2015 09:54:56 +0000 (18:54 +0900)]
make eosBayesInit
Takuo Yasunaga [Tue, 10 Nov 2015 22:33:22 +0000 (07:33 +0900)]
Display2: update
modified: bin/wish/Display2/Display2Init.wish
modified: bin/wish/Display2/tclIndex
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
Takuo Yasunaga [Tue, 10 Nov 2015 22:15:01 +0000 (07:15 +0900)]
Display2 updated: for default
modified: bin/wish/Display2/Display2Init.wish
modified: src/Tools/Config/Define.inc
modified: src/Tools/Integration/Display2/Config/OptionControlFile
modified: src/Tools/Integration/Display2/inc/Display2.h
modified: src/Tools/Integration/Display2/src/Display2.c
Takuo Yasunaga [Tue, 10 Nov 2015 02:20:23 +0000 (11:20 +0900)]
modified: include/lmrcImageSymmetryFind.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageTransformDescartesIntoPolar.c
modified: src/Tools/Config/Define.inc
modified: src/Tools/mrcImage/mrcImageSymmetryAverage/src/mrcImageSymmetryAverage.c
modified: src/Tools/mrcImage/mrcImageSymmetryAverage/src/mrcImageSymmetryAverage.html
new file: src/Tools/mrcImage/mrcImageSymmetryAverage/src/test/Makefile
new file: src/Tools/mrcImage/mrcImageSymmetryAverage/src/test/data
modified: src/Tools/mrcImage/mrcImageSymmetryCentreFind/src/mrcImageSymmetryCentreFind.c
modified: src/Tools/mrcImage/mrcImageSymmetryCentreFind/src/mrcImageSymmetryCentreFind.html
new file: src/Tools/mrcImage/mrcImageSymmetryCentreFind/src/test/Makefile
new file: src/Tools/mrcImage/mrcImageSymmetryCentreFind/src/test/data
modified: src/Tools/mrcImage/mrcImageSymmetryFind/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageSymmetryFind/inc/mrcImageSymmetryFind.h
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/argCheck.c
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/init.c
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/mrcImageSymmetryFind.c
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/mrcImageSymmetryFind.html
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/mrcImageSymmetryFind.pane
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/test/Makefile
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/usage.c
Takuo Yasunaga [Thu, 5 Nov 2015 18:23:55 +0000 (03:23 +0900)]
For updating
modified: env/install-eos.sh
new file: env/update-eos.sh
Takuo Yasunaga [Thu, 5 Nov 2015 17:38:14 +0000 (02:38 +0900)]
install-env
modified: env/Eos_env
modified: env/install-eos.sh
mrcImageAreaCalc
modified: include/lmrcImageCalcArea.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageCalcArea.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageCalcArea.h
Takuo Yasunaga [Thu, 29 Oct 2015 10:43:57 +0000 (19:43 +0900)]
Rebuild:
Start to develop mrcFFTCentralSectionCompare
Takuo Yasunaga [Tue, 27 Oct 2015 21:27:08 +0000 (06:27 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Conflicts:
src/Objects/DataManip/mrcImage/doc/mrcImage.html
Takuo Yasunaga [Tue, 27 Oct 2015 21:24:40 +0000 (06:24 +0900)]
Rebuild:
Takuo Yasunaga [Tue, 27 Oct 2015 20:53:17 +0000 (05:53 +0900)]
New tool
new file: bin/mrcFFTCentralSection
under construction
new file: bin/mrcImageShapeRelaxation
new file: include/lmrcFFTCentralSection.h
modified: include/mrcImage.h
new file: include/mrcImageShape.h
new file: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c
new file: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.h
Add FFTCenterChange
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFFT.c
Add Linear for FFT
modified: src/Objects/DataManip/mrcImage/src/mrcImageGet.c
Takuo Yasunaga [Sun, 18 Oct 2015 13:26:40 +0000 (22:26 +0900)]
mrc2bild completed:
new file: bin/mrc2bild
modified: include/bildFile.h
modified: src/Objects/DataManip/bildFile/src/lmrc2bild.c
modified: src/Tools/filter/mrc2bild/Config/OptionControlFile
Takuo Yasunaga [Sun, 18 Oct 2015 11:53:38 +0000 (20:53 +0900)]
mrcImageShapeSearch: -OVBILD
new tool mrc2bild
new file: include/bildFile.h
new file: src/Objects/DataManip/bildFile/src/lmrc2bild.c
new file: src/Tools/filter/mrc2bild/
modified: src/Tools/mrcImage/mrcImageShapeSearch/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/mrcImageShapeSearch.c
Takuo Yasunaga [Sun, 11 Oct 2015 19:40:34 +0000 (04:40 +0900)]
ctfDisplay modifided: Default values set
modified: bin/wish/ctfDisplay/ctfDisplay.wish
modified: src/Tools/Integration/ctfDisplay/src/wish/ctfDisplay.wish
modified: src/Objects/DataExpress/TclTk/src/ctfInfo.wish
mrcImageClusterAnalysis modified: No average
modified: include/lmrcImageClusterAnalysis.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageClusterAnalysis.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageClusterAnalysis.h
modified: src/Tools/mrcImage/mrcImageClusterAnalysis/src/mrcImageClusterAnalysis.html
modified: src/Tools/mrcImage/mrcImageClusterAnalysis/src/test/Makefile
Takuo Yasunaga [Sat, 3 Oct 2015 22:46:31 +0000 (07:46 +0900)]
mrcImageLocalMaximumValuesFind
new file: include/lmrcImageLocal.h
new file: src/Objects/DataManip/mrcImage/src/lmrcImageLocal.h
copied: src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/mrcImageLocalMaximumValuesFind.c -> src/Objects/DataManip/mrcImage/src/lmrcImageLocalMaximumValuesFind.c
modified: src/Tools/mrcImage/mrcImageLocalMaximumValuesFind/src/mrcImageLocalMaximumValuesFind.c
Takuo Yasunaga [Sat, 3 Oct 2015 21:47:14 +0000 (06:47 +0900)]
Apply -e for extension format
modified: src/Tools/filter/mrc2gif/Config/OptionControlFile
modified: src/Tools/filter/mrc2tiff/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageSectionGet/inc/mrcImageSectionGet.h
Takuo Yasunaga [Sat, 3 Oct 2015 21:38:10 +0000 (06:38 +0900)]
Display2/ctfDisplay for Tcl/Tk 8.6
modified: bin/wish/Display2/Display2.wish
modified: bin/wish/Display2/Display2Init.wish
modified: bin/wish/ctfDisplay/ctfDisplay.wish
modified: bin/wish/ctfDisplay/tclIndex
modified: include/ctfInfo.h
modified: include/lmrcImageClusterAnalysis.h
modified: src/Config/x86Mac64.inc
modified: src/Objects/DataExpress/TclTk/doc/TclTk.html
modified: src/Objects/DataExpress/TclTk/src/CommandEntry.wish
modified: src/Objects/DataExpress/TclTk/src/ctfInfo.wish
modified: src/Objects/DataExpress/TclTk/src/tclUtil.wish
modified: src/Objects/DataExpress/TclTk/src/tkImgFmtMRC.c
modified: src/Objects/DataExpress/TclTk/src/tkImgFmtlargeIP.c
modified: src/Objects/DataExpress/TclTk/src/tkctfInfo.c
modified: src/Objects/DataManip/ctfInfo/doc/ctfInfo.html
modified: src/Objects/DataManip/ctfInfo/inc/ctfInfo.h
mrcImageClusterAnalysis
modified: src/Objects/DataManip/ctfInfo/src/powerspectraTangentLine.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageClusterAnalysis.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageClusterAnalysis.h
modified: src/Tools/ctfInfo/ctfEnvelopFunctionEstimate/src/ctfEnvelopFunctionEstimate.c
mrc2gif/mrc2tiff/mrcImageSEctionGet for serial sections
modified: src/Tools/filter/mrc2tiff/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageSectionGet/Config/OptionControlFile
Takuo Yasunaga [Sat, 19 Sep 2015 00:53:41 +0000 (09:53 +0900)]
change X11 and Tcl/Tk
modified: src/Config/x86Mac64.inc
modified: src/Objects/DataExpress/TclTk/src/tkImgFmtMRC.c
modified mrc2gif
modified: src/Objects/DataExpress/gifFile/src/lmrc2gif.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSurfaceAreaCalc.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageTranspose.c
modified: src/Tools/Config/Define.inc
modified: src/Tools/Integration/Display2/src/Display2.c
Takuo Yasunaga [Wed, 16 Sep 2015 13:46:19 +0000 (22:46 +0900)]
Bug fixed:
modified: src/Objects/DataManip/mrcImage/src/lmrcImageProjection.c
modified: src/Tools/mrcImage/mrcImageProjection/src/mrcImageProjection.c
Takuo Yasunaga [Wed, 16 Sep 2015 01:21:50 +0000 (10:21 +0900)]
New tools create:
new file: bin/mrcImageFeatureCalc
new file: bin/mrcImageSurfaceAreaCalc
new file: bin/mrcImageSurfaceCalc
modified: include/lmrcImageEdge.h
modified: include/lmrcImageFeatureCalc.h
modified: include/lmrcImageLabeling.h
modified: src/Objects/DataExpress/avsFile/src/avsFileInit.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageEdge.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageEdge.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.h
Bug fixed: lmrcImageLabeling(3D)
modified: src/Objects/DataManip/mrcImage/src/lmrcImageLabeling.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageLabeling.h
new file: src/Objects/DataManip/mrcImage/src/lmrcImageSurfaceAreaCalc.c
modified: src/Tools/mrcImage/mrcImageLabeling/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageShapeSearch/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageSphereCheck/src/mrcImageSphereCheck.html
new file: src/Tools/mrcImage/mrcImageSurfaceAreaCalc/Config/Define.inc
new file: src/Tools/mrcImage/mrcImageSurfaceCalc/Config/OptionControlFile
Takuo Yasunaga [Sun, 13 Sep 2015 01:23:19 +0000 (10:23 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Sun, 13 Sep 2015 01:21:59 +0000 (10:21 +0900)]
deleted: bin/mrcImateToPointsSet
modified: src/Tools/mrcImage/mrcImageChainCodeCalc/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageEdgeCalc/Config/OptionControlFile
deleted: src/Tools/mrcImage/mrcImateToPointsSet/
Takuo Yasunaga [Sat, 12 Sep 2015 13:58:41 +0000 (22:58 +0900)]
Merge
Changes to be committed:
Takuo Yasunaga [Sat, 12 Sep 2015 12:44:57 +0000 (21:44 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Sat, 12 Sep 2015 12:39:26 +0000 (21:39 +0900)]
New Tool:
new file: bin/mrcImageChainCodeCalc
Bug fixed
typechange: src/Tools/Makefile
Takuo Yasunaga [Sat, 12 Sep 2015 12:37:36 +0000 (21:37 +0900)]
link->real
new file: src/Makefile
Takuo Yasunaga [Sat, 12 Sep 2015 12:35:05 +0000 (21:35 +0900)]
rebuild:
Takuo Yasunaga [Sat, 12 Sep 2015 12:05:41 +0000 (21:05 +0900)]
Add mrcImageEdgeCalc/mrcImagePerimeterCalc
Bug fixed: lmrcImageIsEdge
new file: bin/mrcImageEdgeCalc
new file: bin/mrcImagePerimeterCalc
modified: src/Objects/DataManip/mrcImage/src/lmrcImageEdge.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageEdge.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.h
Takuo Yasunaga [Thu, 10 Sep 2015 05:20:05 +0000 (14:20 +0900)]
mrcImageBinarization: version up : density band extraction
modified: include/lmrcImageBinarization.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageBinarization.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageBinarization.h
modified: src/Tools/mrcImage/mrcImageBinalization/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageBinalization/src/mrcImageBinalization.c
Takuo Yasunaga [Thu, 10 Sep 2015 03:01:56 +0000 (12:01 +0900)]
modified: include/lmrcImageCorrelation.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageCorrelation.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageCorrelation.h
new file: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.c
new file: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.h
modified: src/Tools/mrcImage/mrcImageAutoRotationCorrelation/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageAutoRotationCorrelation/inc/mrcImageAutoRotationCorrelation.h
modified: src/Tools/mrcImage/mrcImageAutoRotationCorrelation/src/mrcImageAutoRotationCorrelation.c
modified: src/Tools/mrcImage/mrcImageShapeSearch/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/mrcImageShapeSearch.c
Takuo Yasunaga [Tue, 1 Sep 2015 00:27:06 +0000 (09:27 +0900)]
Modified mrcImageShapeSearch
Takuo Yasunaga [Sun, 23 Aug 2015 06:40:39 +0000 (15:40 +0900)]
Add -O : threshold printing
modified: include/lmrcImageBinarization.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageBinarization.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageBinarization.h
modified: src/Tools/mrcImage/mrcImageBinalization/src/mrcImageBinalization.c
Takuo Yasunaga [Sun, 23 Aug 2015 05:57:06 +0000 (14:57 +0900)]
mrcImageBinarization: function added -dt -O
new file: bin/eosBayesInit
modified: include/String.h
modified: include/lmrcImageBinarization.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageBinarization.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageBinarization.h
modified: src/Tools/Config/Define.inc
new file: src/Tools/eosBayes/eosBayesInit/src/eosBayesInit.html
modified: src/Tools/mrcImage/mrcImageBinalization/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageBinalization/inc/mrcImageBinalization.h
modified: src/Tools/mrcImage/mrcImageBinalization/src/argCheck.c
modified: src/Tools/mrcImage/mrcImageBinalization/src/init.c
modified: src/Tools/mrcImage/mrcImageBinalization/src/mrcImageBinalization.c
modified: src/Tools/mrcImage/mrcImageBinalization/src/usage.c
Takuo Yasunaga [Mon, 10 Aug 2015 11:11:36 +0000 (20:11 +0900)]
Start eosBayes development:w
Takuo Yasunaga [Sat, 8 Aug 2015 17:34:28 +0000 (02:34 +0900)]
rebuild: mrcImagePattersonFunctionCalc
Takuo Yasunaga [Sat, 8 Aug 2015 17:26:57 +0000 (02:26 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Sat, 8 Aug 2015 17:25:09 +0000 (02:25 +0900)]
New tool: mrcImagePattersonFunctionCalc
Takuo Yasunaga [Sat, 8 Aug 2015 08:12:27 +0000 (17:12 +0900)]
rebase:
Takuo Yasunaga [Sat, 8 Aug 2015 08:06:20 +0000 (17:06 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Sat, 8 Aug 2015 08:03:50 +0000 (17:03 +0900)]
Modified and Bug fixed:
modified: src/Objects/DataManip/mrcImage/src/lmrcImageTranspose.c
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.c
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/test/Makefile
new file: src/Tools/mrcImage/mrcImageTranspose/src/test/Makefile
new file: src/Tools/mrcImage/mrcImageTranspose/src/test/data
Takuo Yasunaga [Sat, 8 Aug 2015 03:07:50 +0000 (12:07 +0900)]
modified: src/Objects/DataManip/mrcImage/src/lmrcImageTranspose.c
new file: src/Tools/mrcImage/mrcImageTranspose/src/test/Makefile
new file: src/Tools/mrcImage/mrcImageTranspose/src/test/data
Takuo Yasunaga [Sat, 8 Aug 2015 02:55:31 +0000 (11:55 +0900)]
Modified: lmrcImageTranspose
new file: include/lmrcImageTranspose.h
modified: src/Objects/DataManip/mrcImage/src/.CHeader
new file: src/Objects/DataManip/mrcImage/src/lmrcImageTranspose.c
new file: src/Objects/DataManip/mrcImage/src/lmrcImageTranspose.h
modified: src/Tools/mrcImage/mrcImageTranspose/src/mrcImageTranspose.c
Takuo Yasunaga [Sun, 12 Jul 2015 04:17:26 +0000 (13:17 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Sun, 12 Jul 2015 04:14:43 +0000 (13:14 +0900)]
bug fixed: lmrc2Dto3D
Takuo Yasunaga [Wed, 8 Jul 2015 09:01:56 +0000 (18:01 +0900)]
rebuild: lmrcImageUnsharpening
Takuo Yasunaga [Wed, 8 Jul 2015 08:54:14 +0000 (17:54 +0900)]
modified: mrcImageUnsharpening: -m 2
Takuo Yasunaga [Wed, 8 Jul 2015 08:32:18 +0000 (17:32 +0900)]
new tool: mrcImageUnsharpening
Takuo Yasunaga [Fri, 3 Jul 2015 03:37:06 +0000 (12:37 +0900)]
bug fixed:
Takuo Yasunaga [Fri, 3 Jul 2015 03:33:39 +0000 (12:33 +0900)]
bug fixed:
2 Memory Allocation
Takuo Yasunaga [Fri, 3 Jul 2015 01:22:39 +0000 (10:22 +0900)]
rebuild mrc3Dto2D
Takuo Yasunaga [Fri, 3 Jul 2015 01:17:59 +0000 (10:17 +0900)]
faster 3Dto2D
Takuo Yasunaga [Sun, 21 Jun 2015 02:19:51 +0000 (11:19 +0900)]
Link Change: util
Takuo Yasunaga [Sun, 21 Jun 2015 00:04:20 +0000 (09:04 +0900)]
MOdified: dm2mrc , Length information
Takuo Yasunaga [Thu, 18 Jun 2015 16:12:01 +0000 (01:12 +0900)]
rebuild: for dm2mrc dmInfo mrcImageShapeSearch
Takuo Yasunaga [Thu, 18 Jun 2015 15:19:42 +0000 (00:19 +0900)]
dm2mrc: fixed
Takuo Yasunaga [Thu, 18 Jun 2015 15:19:13 +0000 (00:19 +0900)]
dm2mrc: added
Takuo Yasunaga [Thu, 18 Jun 2015 00:18:43 +0000 (09:18 +0900)]
dmFileInfo: pointer added
Takuo Yasunaga [Wed, 10 Jun 2015 12:34:42 +0000 (21:34 +0900)]
Rebuild for bug fixation
Takuo Yasunaga [Mon, 8 Jun 2015 03:14:52 +0000 (12:14 +0900)]
Bug fixed:
mrcImageToneReversal
Takuo Yasunaga [Mon, 8 Jun 2015 02:08:01 +0000 (11:08 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Sun, 7 Jun 2015 21:03:19 +0000 (06:03 +0900)]
check for cuda
Takuo Yasunaga [Sun, 7 Jun 2015 20:55:07 +0000 (05:55 +0900)]
Bug fixed and rebuild:
lmrcImageCopy
Takuo Yasunaga [Sun, 7 Jun 2015 10:57:42 +0000 (19:57 +0900)]
Modified:
make Zephyr detach from base
modified: .gitignore
modified: Makefile
modified: src/Config/x86Mac64.inc
modified: src/Objects/DataManip/dmFile/inc/dmFile.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageRadialDistribution.h
modified: src/Objects/DataManip/pdbFile/src/pdbTrans.c
New Class: eosBayes
new file: src/Objects/General/eosBayes/
mrcImage3DPeakGet: under constrution
new file: src/Tools/mrcImage/mrcImage3DPeakGet/
mrcImageSNEstimate::
new file: src/Tools/mrcImage/mrcImageSNEstimate/src/usage.c
new file: src/Tools/mrcImage/mrcImageSNEstimate/src/util.c
mrcImageShapeSearch::
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/mrcImageShapeSearch.c
pdb2mrc2d::
modified: src/Tools/pdbUtil/pdb2mrc2d/Config/OptionControlFile
himatani_cafe [Sun, 7 Jun 2015 07:30:52 +0000 (16:30 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
himatani_cafe [Sun, 7 Jun 2015 07:27:38 +0000 (16:27 +0900)]
ditached zephyr directory
himatani_cafe [Sun, 7 Jun 2015 07:16:39 +0000 (16:16 +0900)]
tmp
Takuo Yasunaga [Sun, 17 May 2015 20:02:42 +0000 (05:02 +0900)]
merge
Changes to be committed:
modified: bin/wish/Display2/tclIndex
Takuo Yasunaga [Sat, 16 May 2015 06:10:51 +0000 (15:10 +0900)]
merge:
rebuild
Takuo Yasunaga [Sat, 16 May 2015 00:37:40 +0000 (09:37 +0900)]
No vacancy: Labeling
modified: include/lmrcImageLabeling.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageLabeling.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageLabeling.h
modified: src/Tools/mrcImage/mrcImageLabeling/src/mrcImageLabeling.c
Takuo Yasunaga [Sat, 16 May 2015 00:06:24 +0000 (09:06 +0900)]
Labeling Modified:
modified: src/Objects/DataManip/mrcImage/src/lmrcImageLabeling.c
modified: src/Tools/Config/Define.inc
modified: src/Tools/mrcImage/mrcImageLabeling/src/mrcImageLabeling.c
Takuo Yasunaga [Mon, 4 May 2015 13:00:38 +0000 (22:00 +0900)]
modified: src/Objects/DataManip/dmFile/src/dmFileInfo.c
Takuo Yasunaga [Mon, 4 May 2015 09:50:53 +0000 (18:50 +0900)]
modified: .gitignore
Takuo Yasunaga [Mon, 4 May 2015 09:49:24 +0000 (18:49 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Mon, 4 May 2015 09:18:28 +0000 (18:18 +0900)]
Bugfixed: YAML-format
for dmInfo
Takuo Yasunaga [Wed, 22 Apr 2015 09:43:11 +0000 (18:43 +0900)]
rebuid: dmInfo
Takuo Yasunaga [Wed, 22 Apr 2015 09:33:36 +0000 (18:33 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Wed, 22 Apr 2015 09:32:01 +0000 (18:32 +0900)]
Modified: dmInfo
Assign array of UInt2 as string of UTF-16
Takuo Yasunaga [Wed, 22 Apr 2015 00:10:18 +0000 (09:10 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Rebuild: dmInfo
Conflicts:
bin/wish/Display2/tclIndex
Takuo Yasunaga [Wed, 22 Apr 2015 00:08:13 +0000 (09:08 +0900)]
modified: bin/wish/Display2/tclIndex
Takuo Yasunaga [Wed, 22 Apr 2015 00:02:21 +0000 (09:02 +0900)]
Create a new tool:
dmInfo
Takuo Yasunaga [Wed, 1 Apr 2015 21:19:19 +0000 (06:19 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Conflicts:
src/Objects/DataManip/dmFile/doc/dmFile.html
src/Tools/mrcImage/mrcImageDensityInfo/src/mrcImageDensityInfo.html
Takuo Yasunaga [Wed, 1 Apr 2015 21:15:55 +0000 (06:15 +0900)]
rebuild:
Takuo Yasunaga [Wed, 1 Apr 2015 20:37:54 +0000 (05:37 +0900)]
rebuid
Takuo Yasunaga [Wed, 1 Apr 2015 20:10:16 +0000 (05:10 +0900)]
for merge
Makefile
Takuo Yasunaga [Wed, 1 Apr 2015 20:08:25 +0000 (05:08 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Conflicts:
bin/wish/Display2/tclIndex
Takuo Yasunaga [Wed, 1 Apr 2015 20:06:31 +0000 (05:06 +0900)]
for merge
CUDA install
Takuo Yasunaga [Wed, 1 Apr 2015 19:39:17 +0000 (04:39 +0900)]
ticket #35034
Sphere index, Disk index, Cylinder index
Larger values indicate its shape.
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