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Takuo Yasunaga [Sat, 9 Apr 2016 10:21:00 +0000 (19:21 +0900)]
Display2 update: hidden angleLock
modified: bin/wish/Display2/Display2InfoROI.wish
modified: bin/wish/Display2/Display2MenuROI.wish
modified: src/Tools/Integration/Display2/src/wish/Display2InfoROI.wish
modified: src/Tools/Integration/Display2/src/wish/Display2MenuROI.wish
Takuo Yasunaga [Sat, 9 Apr 2016 10:13:20 +0000 (19:13 +0900)]
Display2 update: for angleLock
modified: bin/wish/Display2/Display2InfoROI.wish
modified: bin/wish/Display2/Display2Init.wish
modified: bin/wish/Display2/Display2Menu.wish
modified: bin/wish/Display2/Display2MenuROI.wish
modified: bin/wish/Display2/RoiAreaCreate.wish
modified: lib/fileSave.wish
modified: src/Objects/DataExpress/TclTk/src/fileSave.wish
modified: src/Objects/DataManip/mrcImage/src/mrcImageToIntImage.c
modified: src/Tools/Integration/Display2/src/Display2.html
modified: src/Tools/Integration/Display2/src/wish/Display2InfoROI.wish
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified: src/Tools/Integration/Display2/src/wish/Display2Menu.wish
modified: src/Tools/Integration/Display2/src/wish/Display2MenuROI.wish
modified: src/Tools/Integration/Display2/src/wish/RoiAreaCreate.wish
modified: src/Tools/Integration/Display2/src/wish/tclIndex
Takuo Yasunaga [Fri, 1 Apr 2016 09:17:03 +0000 (18:17 +0900)]
deleted: src/Objects/DataManip/dmFile/src/Image
Takuo Yasunaga [Fri, 1 Apr 2016 09:15:36 +0000 (18:15 +0900)]
modified: src/Objects/DataManip/dmFile/src/ldm2mrc.c
Takuo Yasunaga [Mon, 28 Mar 2016 05:32:02 +0000 (14:32 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Mon, 28 Mar 2016 05:31:48 +0000 (14:31 +0900)]
Bug fixed:
modified: bin/wish/ctfDisplay/tclIndex
modified: src/Objects/DataManip/mrcImage/src/lmrcFFTInfo.c
modified: src/Objects/DataManip/mrcImage/src/mrcImageGet.c
中野沙紀 [Thu, 24 Mar 2016 02:20:54 +0000 (11:20 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
中野沙紀 [Tue, 22 Mar 2016 04:02:38 +0000 (13:02 +0900)]
"push"
Takuo Yasunaga [Sun, 20 Mar 2016 00:02:22 +0000 (09:02 +0900)]
-Owall and -Oball were added: mrcImageMeanFreePathCalc
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.c
Takuo Yasunaga [Sat, 19 Mar 2016 05:27:47 +0000 (14:27 +0900)]
Bug fixed: CharImage did not be added. -> All Image and FT files can be added now.
modified: src/Tools/mrcImage/mrcImageAdd/src/mrcImageAdd.c
中野沙紀 [Fri, 18 Mar 2016 06:24:20 +0000 (15:24 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
中野沙紀 [Fri, 18 Mar 2016 06:07:45 +0000 (15:07 +0900)]
modified: Objects/DataManip/mrcImage/src/lmrcMultiFFTCentralSectionsCompare.c
new file: Tools/rec3d/mrc2DFTto3DFT/inc/mrc2DFTto3DFT.h
new file: Tools/rec3d/mrc3Dto2DFFT/inc/mrc3Dto2DFFT.h
new file: Tools/rec3d/mrc3Dto2DFFT/src/mrc3Dto2DFFT.c
Takuo Yasunaga [Thu, 17 Mar 2016 07:09:02 +0000 (16:09 +0900)]
Rebuild:
modified: src/Objects/DataExpress/.Source.org
modified: src/Objects/DataExpress/Contour/src/Makefile
modified: src/Objects/DataExpress/avsFile/src/Makefile
modified: src/Objects/DataExpress/eosAlsa/src/Makefile
modified: src/Objects/DataExpress/eosOpenGL/src/Makefile
modified: src/Objects/DataExpress/gifFile/src/Makefile
new file: src/Objects/DataExpress/pngFile/.Source.org
modified: src/Objects/DataExpress/pngFile/src/Makefile
modified: src/Objects/DataExpress/psFile/src/Makefile
Takuo Yasunaga [Thu, 17 Mar 2016 07:06:09 +0000 (16:06 +0900)]
Source Code refactoring
new file: include/lmrcImageMeanFreePath.h
modified: src/Objects/DataManip/mrcImageShape/inc/mrcImageShape.h
new file: src/Objects/DataManip/mrcImageShape/src/lmrcImageMeanFreePath.c
new file: src/Objects/DataManip/mrcImageShape/src/lmrcImageMeanFreePath.h
modified: src/Objects/DataManip/mrcImageShape/src/lmrcImageShapeSearch.c
-Length:
modified: src/Tools/mrcImage/mrcImageInfo/src/mrcImageInfo.c
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.c
Takuo Yasunaga [Wed, 16 Mar 2016 03:11:29 +0000 (12:11 +0900)]
Add a fuction of default environments: Display2Init
modified: bin/wish/Display2/Display2Init.wish
Source code fixed for OSX
modified: src/Tools/mrcImage/mrcImageFourierPowerSpectrum/src/mrcImageFourierPowerSpectrum.c
New functions were added: any directions
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/inc/mrcImageMeanFreePathCalc.h
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/argCheck.c
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/init.c
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.c
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.html
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.pane
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/test/Makefile
modified: src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/usage.c
Takuo Yasunaga [Sat, 27 Feb 2016 23:30:05 +0000 (08:30 +0900)]
New Tool:
new file: bin/mrcImage2FFT
new file: include/lmrcImageToFFT.h
modified: src/Objects/DataManip/transform/src/.CHeader
new file: src/Objects/DataManip/transform/src/lmrcImageToFFT.c
new file: src/Objects/DataManip/transform/src/lmrcImageToFFT.h
modified: src/Tools/Config/Define.inc
typechange: src/Tools/Makefile
modified: src/Tools/filter/.Source
new file: src/Tools/filter/mrcImage2FFT/
Modified:
modified: env/Eos_env
中野沙紀 [Sun, 21 Feb 2016 08:17:28 +0000 (17:17 +0900)]
modified: mrc2DFTto3DFT.c
Takuo Yasunaga [Sun, 21 Feb 2016 07:18:42 +0000 (16:18 +0900)]
new file: bin/.DS_Store
new file: bin/mrcMultiFFTCentralSectionsCompare
modified: env/Eos_env
modified: include/lmrc3Dto2D.h
modified: include/lmrcFFTCentralSection.h
new file: src/.DS_Store
new file: src/Objects/.DS_Store
modified: src/Objects/DataExpress/eosRuby/src/Swig/mkmf.log
new file: src/Objects/DataManip/.DS_Store
new file: src/Objects/DataManip/mrcImage/.DS_Store
new file: src/Objects/DataManip/mrcImage/src/#lmrcMultiFFTCentralSectionsCompare.c#
new file: src/Objects/DataManip/mrcImage/src/.DS_Store
new file: src/Objects/DataManip/mrcImage/src/1
modified: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c
new file: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c~
modified: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.h
new file: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSectionCompare.c
new file: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSectionCompareInfoWrite.c
new file: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSectionsGet.c
new file: src/Objects/DataManip/mrcImage/src/lmrcMultiFFTCentralSectionsCompare.c
modified: src/Objects/DataManip/transform/src/lmrc3Dto2D.h
new file: src/Objects/DataManip/transform/src/lmrc3Dto2DFFT.c
new file: src/Tools/.DS_Store
modified: src/Tools/.Source
modified: src/Tools/Config/Define.inc
typechange: src/Tools/Makefile
new file: src/Tools/mrcImage/.DS_Store
modified: src/Tools/mrcImage/.Source
modified: src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/mrcFFTCentralSectionCompare.c
new file: src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Makefile
new file: src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out.txt
new file: src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out2.txt
new file: src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out3.txt
new file: src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out4.txt
new file: src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out5.txt
new file: src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/data
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/.DS_Store
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/Config/Define.inc
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/Config/OptionControlFile
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/Config/Target.inc
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/Makefile
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/doc/Makefile
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/inc/config.h
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/inc/mrcMultiFFTCentralSectionsCompare.h
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/#mrcMultiFFTCentralSectionsCompare.c#
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/.DS_Store
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/.Depend
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/.Source
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/Makefile
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/X86MAC64
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/argCheck.c
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/init.c
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/mrcMultiFFTCentralSectionsCompare.c
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/mrcMultiFFTCentralSectionsCompare.html
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/mrcMultiFFTCentralSectionsCompare.pane
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/#Out1.txt#
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/#OutOutOut3.txt#
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/.DS_Store
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/Makefile
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/Out-21-5.txt
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/Out-22-5.txt
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/OutN-21-5.txt
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/OutN-22-5.txt
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/data
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/usage.c
new file: src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/util.c
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/.Depend
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/.Source
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/Makefile
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/X86MAC64
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/argCheck.c
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/init.c
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/mrc2DFTto3DFT.c
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/mrc2DFTto3DFT.html
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/mrc2DFTto3DFT.pane
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/test/Makefile
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/test/Outdata.3d
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/test/TestOutdata.3d
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/test/data
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/usage.c
new file: src/Tools/rec3d/mrc2DFTto3DFT/src/util.c
typechange: util/src/CUDA/Makefile
typechange: util/src/Graphics/Makefile
new file: util/src/ImageAnalysis/Makefile
Takuo Yasunaga [Sat, 20 Feb 2016 08:35:41 +0000 (17:35 +0900)]
Under contraction
modified: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c
-m 5/9 message
modified: src/Objects/DataManip/mrcImage/src/lmrcImagePad.c
modified: src/Tools/Config/Define.inc
-R: 2.5 -> 1.0
modified: src/Tools/filter/tiff2mrc/Config/OptionControlFile
modified: src/Tools/filter/tiff2mrc/src/init.c
modified: src/Tools/filter/tiff2mrc/src/tiff2mrc.html
modified: src/Tools/filter/tiff2mrc/src/tiff2mrc.pane
modified: src/Tools/filter/tiff2mrc/src/usage.c
中野沙紀 [Sat, 20 Feb 2016 03:38:56 +0000 (12:38 +0900)]
"create Tool"
中野沙紀 [Sat, 20 Feb 2016 02:51:36 +0000 (11:51 +0900)]
Merge branch 'master' of git://git.sourceforge.jp/gitroot/eos/base
中野沙紀 [Sat, 13 Feb 2016 05:07:27 +0000 (14:07 +0900)]
"resolve conflict"
中野沙紀 [Sat, 13 Feb 2016 05:05:34 +0000 (14:05 +0900)]
"rebuld"
Takuo Yasunaga [Sat, 13 Feb 2016 04:16:45 +0000 (13:16 +0900)]
modified: bin/wish/Display2/tclIndex
modified: include/lmrcImageConnectivityNumberCalc.h
modified: include/lmrcImageFeatureCalc.h
modified: lib/tclIndex
modified: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageConnectivityNumberCalc.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageConnectivityNumberCalc.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageDistanceConversion.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.h
modified: src/Objects/DataManip/mrcImageShape/inc/mrcImageShape.h
modified: src/Objects/DataManip/mrcImageShape/src/lmrcImageShapeSearch.c
new file: src/Tools/mrcImage/mrcImageDistanceConversion/src/test/Makefile
new file: src/Tools/mrcImage/mrcImageDistanceConversion/src/test/data
中野沙紀 [Sat, 6 Feb 2016 13:28:26 +0000 (22:28 +0900)]
"create new Tool mrc3Dto2DFFT"
中野沙紀 [Fri, 29 Jan 2016 01:02:20 +0000 (10:02 +0900)]
"debug"
中野沙紀 [Thu, 28 Jan 2016 07:36:59 +0000 (16:36 +0900)]
"debug for lmrcMultiFFTCentralSectionsCompare.c"
中野沙紀 [Fri, 22 Jan 2016 14:14:50 +0000 (23:14 +0900)]
"modified lmrcMultiFFTCentralSectionsCompare"
中野沙紀 [Fri, 22 Jan 2016 13:24:54 +0000 (22:24 +0900)]
"rebuid"
中野沙紀 [Fri, 22 Jan 2016 12:44:03 +0000 (21:44 +0900)]
"rebuid"
中野沙紀 [Fri, 22 Jan 2016 01:36:46 +0000 (10:36 +0900)]
"modified lmrcMultiFFTCentralSectionsCompare"
中野沙紀 [Fri, 22 Jan 2016 01:24:50 +0000 (10:24 +0900)]
"commit for modified Object"
中野沙紀 [Fri, 22 Jan 2016 00:37:29 +0000 (09:37 +0900)]
"modified OptionControlFile"
中野沙紀 [Fri, 22 Jan 2016 00:31:34 +0000 (09:31 +0900)]
"commit for add likelihood calc function"
中野沙紀 [Mon, 18 Jan 2016 11:01:04 +0000 (20:01 +0900)]
commit for add function
中野沙紀 [Fri, 15 Jan 2016 13:45:36 +0000 (22:45 +0900)]
commit for conflict
中野沙紀 [Fri, 15 Jan 2016 13:39:36 +0000 (22:39 +0900)]
change mrcMultiFFTCentralSectionsCompare.c
yonghong1969 [Fri, 15 Jan 2016 13:36:02 +0000 (22:36 +0900)]
first commit
中野沙紀 [Thu, 14 Jan 2016 12:05:29 +0000 (21:05 +0900)]
create mrcMultiFFTCentralSectionsCompare
Takuo Yasunaga [Tue, 12 Jan 2016 17:08:17 +0000 (18:08 +0100)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Tue, 12 Jan 2016 17:06:40 +0000 (18:06 +0100)]
Display2:ROI
modified: bin/wish/Display2/Display2Init.wish
modified: bin/wish/Display2/RoiAreaFile.wish
Eos_env
modified: env/Eos_env
lmrcImageDisptance: under construction
modified: include/lmrcImageDistanceConversion.h
mrcImageShapePCA: 2D support Wcircle
modified: include/lmrcImageShapePCA.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageDistanceConversion.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageDistanceConversion.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageDistanceConversion.h.org
modified: src/Objects/DataManip/mrcImage/src/lmrcImageShapePCA.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageShapePCA.h
modified: src/Objects/DataManip/mrcImageShape/src/lmrcImageShapeModePrint.c
modified: src/Tools/Config/Define.inc
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified: src/Tools/Integration/Display2/src/wish/RoiAreaFile.wish
modified: src/Tools/mrcImage/mrcImageShapePCA/src/test/Makefile
modified: src/Tools/mrcImage/mrcImageShapeSearch/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageShapeSearch/inc/mrcImageShapeSearch.h
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/argCheck.c
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/init.c
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/mrcImageShapeSearch.c
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/mrcImageShapeSearch.pane
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/usage.c
Eos [Mon, 30 Nov 2015 11:12:34 +0000 (20:12 +0900)]
Makefile modified:
modified: Makefile
modified: src/Config/Template/ObjectsTemplate.Dir/src/Makefile
modified: src/Config/x86Linux64.inc
Display2
modified: bin/wish/Display2/Display2Init.wish
for TclTkBLT
modified: include/tkImgFmtMRC.h
modified: lib/CommandEntry.wish
modified: lib/ctfInfo.wish
new file: lib/defaultLoad.wish
modified: lib/tclUtil.wish
modified: src/Config/x86Linux64.inc
modified: src/Objects/DataExpress/TclTk/src/Makefile
modified: src/Objects/DataExpress/TclTk/src/tkImgFmtMRC.c
modified: src/Objects/DataExpress/TclTk/src/tkImgFmtMRC.h
modified: src/Objects/DataExpress/eosRuby/src/Makefile
modified: src/Objects/DataExpress/eosRuby/src/Swig/molvieRuby_wrap.c
deleted: src/Tools/Integration/ctfDisplay/src/#%2Amerge%2A#164246YY#
modified: util/src/TclTk/Makefile
Eos [Sun, 29 Nov 2015 22:34:38 +0000 (07:34 +0900)]
Verion up git:
Makefile version up
Eos [Sun, 29 Nov 2015 22:33:33 +0000 (07:33 +0900)]
modified: util/src/Admin/Makefile
GIT:
Eos [Sun, 29 Nov 2015 22:10:35 +0000 (07:10 +0900)]
For CUDA
modified: env/Eos_env
Eos [Sun, 29 Nov 2015 19:37:17 +0000 (04:37 +0900)]
For LINUX: .bashrc and .bash_profile
modified: env/install-eos.sh
new file: env/template.bashrc
modified: env/update-eos.sh
Takuo Yasunaga [Sat, 28 Nov 2015 05:51:19 +0000 (14:51 +0900)]
Tcl/Tk Newversion
modified: util/src/TclTk/Makefile
Takuo Yasunaga [Fri, 27 Nov 2015 01:21:29 +0000 (10:21 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Fri, 27 Nov 2015 01:20:33 +0000 (10:20 +0900)]
Bug fixed: makegeneral ln Makfile -> cp Makefile
modified: sbin/makegeneral
typechange: src/Tools/Makefile
Takuo Yasunaga [Fri, 27 Nov 2015 01:15:05 +0000 (10:15 +0900)]
mrcImageCTFObservation : add -ctf
modified: src/Tools/mrcImage/mrcImageCTFObservation/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageCTFObservation/src/mrcImageCTFObservation.c
Under construction:mrcImage3DCTFObservation
Takuo Yasunaga [Sat, 21 Nov 2015 03:21:47 +0000 (12:21 +0900)]
ctfDisplay: modified
modified: bin/wish/ctfDisplay/ctfDisplay.wish
modified: src/Objects/DataExpress/TclTk/src/CommandEntry.wish
modified: src/Tools/Integration/ctfDisplay/src/wish/ctfDisplay.wish
Takuo Yasunaga [Sat, 21 Nov 2015 02:46:44 +0000 (11:46 +0900)]
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
Takuo Yasunaga [Sat, 21 Nov 2015 02:06:47 +0000 (11:06 +0900)]
Display2: modified
modified: bin/wish/Display2/Display2Binding.wish
modified: bin/wish/Display2/Display2ETCSet.wish
modified: bin/wish/Display2/Display2Init.wish
Takuo Yasunaga [Sat, 21 Nov 2015 00:21:08 +0000 (09:21 +0900)]
Display2: Mode
modified: bin/wish/Display2/Display2.wish
modified: bin/wish/Display2/Display2Image.wish
modified: bin/wish/Display2/Display2Init.wish
modified: bin/wish/Display2/RoiAreaCreate.wish
modified: bin/wish/Display2/RoiAreaFile.wish
modified: bin/wish/Display2/tclIndex
modified: src/Objects/DataExpress/TclTk/src/tclUtil.wish
modified: src/Tools/Integration/Display2/src/wish/Display2.wish
modified: src/Tools/Integration/Display2/src/wish/Display2Image.wish
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified: src/Tools/Integration/Display2/src/wish/RoiAreaCreate.wish
modified: src/Tools/Integration/Display2/src/wish/RoiAreaFile.wish
Takuo Yasunaga [Wed, 18 Nov 2015 20:59:18 +0000 (05:59 +0900)]
typechange: src/Tools/Makefile
Takuo Yasunaga [Wed, 18 Nov 2015 20:55:20 +0000 (05:55 +0900)]
deleted: .Source.org
modified: src/Tools/Config/Define.inc
typechange: src/Tools/Makefile
Change Unit : pixel -> angstrom
modified: src/Tools/mrcImage/mrcImageSymmetryFind/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/mrcImageSymmetryFind.html
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/mrcImageSymmetryFind.pane
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/usage.c
Takuo Yasunaga [Wed, 18 Nov 2015 13:09:16 +0000 (22:09 +0900)]
modified: Makefile
Takuo Yasunaga [Wed, 18 Nov 2015 13:08:18 +0000 (22:08 +0900)]
modified: env/update-eos.sh
Takuo Yasunaga [Wed, 18 Nov 2015 13:05:50 +0000 (22:05 +0900)]
modified: env/update-eos.sh
Takuo Yasunaga [Wed, 18 Nov 2015 12:55:12 +0000 (21:55 +0900)]
modified: env/update-eos.sh
Takuo Yasunaga [Wed, 18 Nov 2015 12:52:28 +0000 (21:52 +0900)]
modified: Makefile
Takuo Yasunaga [Wed, 18 Nov 2015 12:51:06 +0000 (21:51 +0900)]
modified: Makefile
Takuo Yasunaga [Wed, 18 Nov 2015 12:38:25 +0000 (21:38 +0900)]
modified: Makefile
Y -> Y|y
Takuo Yasunaga [Wed, 18 Nov 2015 12:36:12 +0000 (21:36 +0900)]
update-eos.sh: changed
modified: env/update-eos.sh
modified: Display2
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
Takuo Yasunaga [Tue, 17 Nov 2015 23:08:11 +0000 (08:08 +0900)]
Installation commamnds:
modified: env/Eos_env
modified: env/install-eos.sh
Takuo Yasunaga [Tue, 17 Nov 2015 21:24:34 +0000 (06:24 +0900)]
-rrange for byAdd
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.c
Takuo Yasunaga [Tue, 17 Nov 2015 20:45:35 +0000 (05:45 +0900)]
Under consturction
new file: include/pngFile.h
modified: src/Objects/DataExpress/.Source
modified: src/Objects/DataExpress/Makefile
new file: src/Objects/DataExpress/pngFile/.Source
each avgFile
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.c
modified: src/Objects/Makefile
Takuo Yasunaga [Tue, 17 Nov 2015 20:25:40 +0000 (05:25 +0900)]
Delete src/Tools/Test from repository
Takuo Yasunaga [Tue, 17 Nov 2015 20:24:20 +0000 (05:24 +0900)]
modified: .gitignore
Takuo Yasunaga [Tue, 17 Nov 2015 20:21:38 +0000 (05:21 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Tue, 17 Nov 2015 20:19:38 +0000 (05:19 +0900)]
Add -rrange
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.c
modified: include/lmrcImageSymmetryFind.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.h
modified: src/Tools/Config/Define.inc
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/test/Makefile
Modified
modified: env/Eos_env
modified: env/install-eos.sh
Modified: nvcc
modified: src/Config/x86Mac64.inc
久永浩司 [Tue, 17 Nov 2015 11:59:24 +0000 (20:59 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
久永浩司 [Tue, 17 Nov 2015 11:57:33 +0000 (20:57 +0900)]
Changes to be committed:
modified: include/eosBayes.h
modified: src/Objects/General/eosBayes/doc/eosBayes.html
modified: src/Objects/General/eosBayes/inc/eosBayes.h
new file: src/Objects/General/eosBayes/src/eosBayesEstimation.c
new file: src/Objects/General/eosBayes/src/eosBayesEstimation.c~
new file: src/Objects/General/eosBayes/src/eosBayesRead.c
new file: src/Objects/General/eosBayes/src/eosBayesRead.c~
modified: src/Tools/.Source.org
modified: src/Tools/Config/Define.inc
typechange: src/Tools/Makefile
modified: src/Tools/Test/.Source
modified: src/Tools/Test/.Source.org
typechange: src/Tools/Test/Makefile
new file: src/Tools/Test/hisanaga/Config/Define.inc
new file: src/Tools/Test/hisanaga/Config/OptionControlFile
new file: src/Tools/Test/hisanaga/Config/OptionControlFile~
new file: src/Tools/Test/hisanaga/Config/Target.inc
new file: src/Tools/Test/hisanaga/Makefile
new file: src/Tools/Test/hisanaga/doc/Makefile
new file: src/Tools/Test/hisanaga/inc/config.h
new file: src/Tools/Test/hisanaga/inc/hisanaga.h
new file: src/Tools/Test/hisanaga/src/.Depend
new file: src/Tools/Test/hisanaga/src/.Source
new file: src/Tools/Test/hisanaga/src/Makefile
new file: src/Tools/Test/hisanaga/src/X86MAC64
new file: src/Tools/Test/hisanaga/src/argCheck.c
new file: src/Tools/Test/hisanaga/src/hisanaga.c
new file: src/Tools/Test/hisanaga/src/hisanaga.c~
new file: src/Tools/Test/hisanaga/src/hisanaga.pane
new file: src/Tools/Test/hisanaga/src/init.c
new file: src/Tools/Test/hisanaga/src/test/Makefile
new file: src/Tools/Test/hisanaga/src/test/Makefile~
new file: src/Tools/Test/hisanaga/src/test/data
new file: src/Tools/Test/hisanaga/src/usage.c
new file: src/Tools/Test/hisanaga/src/util.c
modified: src/Tools/eosBayes/.Source.org
Takuo Yasunaga [Mon, 16 Nov 2015 23:25:16 +0000 (08:25 +0900)]
modified: env/install-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 23:24:20 +0000 (08:24 +0900)]
Merge git.osdn.jp:/gitroot/eos/base
Takuo Yasunaga [Mon, 16 Nov 2015 23:23:20 +0000 (08:23 +0900)]
modified: env/Eos_env
modified: env/install-eos.sh
modified: env/update-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 23:20:36 +0000 (08:20 +0900)]
modified: env/Eos_env
modified: env/install-eos.sh
modified: env/update-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 23:17:30 +0000 (08:17 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Mon, 16 Nov 2015 23:16:55 +0000 (08:16 +0900)]
modified: Integration/2DClustering/test/all.logps
modified: env/Eos_env
modified: env/install-eos.sh
modified: env/update-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 22:47:29 +0000 (07:47 +0900)]
update install-eos.sh
modified: env/install-eos.sh
Takuo Yasunaga [Mon, 16 Nov 2015 22:05:41 +0000 (07:05 +0900)]
Bug fixed: modified
modified: bin/wish/Display2/Display2.wish
modified: bin/wish/Display2/Display2Init.wish
modified: bin/wish/Display2/LayerLineUtil.wish
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
Takuo Yasunaga [Sat, 14 Nov 2015 05:04:52 +0000 (14:04 +0900)]
mrcImageFeatureCalc: modified
modified: include/lmrcImageFeatureCalc.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSurfaceAreaCalc.c
Takuo Yasunaga [Fri, 13 Nov 2015 02:15:11 +0000 (11:15 +0900)]
Please enter the commit message for your changes. Lines starting
with '#' will be ignored, and an empty message aborts the commit.
On branch master
Changes to be committed:
modified: bin/wish/ctfDisplay/ctfDisplay.wish
modified: bin/wish/ctfDisplay/tclIndex
modified: include/bildFile.h
modified: src/Objects/DataExpress/Makefile
modified: src/Objects/DataExpress/TclTk/src/.Wish
modified: src/Objects/DataExpress/TclTk/src/CommandEntry.wish
new file: src/Objects/DataExpress/TclTk/src/defaultLoad.wish
new file: src/Objects/DataExpress/pngFile/Config/Define.inc
new file: src/Objects/DataExpress/pngFile/Config/Target.inc
new file: src/Objects/DataExpress/pngFile/Makefile
new file: src/Objects/DataExpress/pngFile/doc/.footer
new file: src/Objects/DataExpress/pngFile/doc/.header
new file: src/Objects/DataExpress/pngFile/doc/.pngFile.html
new file: src/Objects/DataExpress/pngFile/doc/Makefile
new file: src/Objects/DataExpress/pngFile/inc/Makefile
new file: src/Objects/DataExpress/pngFile/inc/pngFile.h
new file: src/Objects/DataExpress/pngFile/inc/pngFile.h.org
new file: src/Objects/DataExpress/pngFile/src/.CCHeader
new file: src/Objects/DataExpress/pngFile/src/.CHeader
new file: src/Objects/DataExpress/pngFile/src/.Ruby
new file: src/Objects/DataExpress/pngFile/src/.Wish
new file: src/Objects/DataExpress/pngFile/src/Makefile
new file: src/Objects/DataExpress/pngFile/src/X86MAC64
modified: src/Objects/DataManip/bildFile/doc/bildFile.html
modified: src/Objects/DataManip/bildFile/inc/bildFile.h
modified: src/Objects/DataManip/bildFile/src/lmrc2bild.c
modified: src/Objects/Makefile
modified: src/Objects/Makefile.org
modified: src/Tools/Config/Define.inc
modified: src/Tools/Integration/ctfDisplay/src/wish/ctfDisplay.wish
typechange: src/Tools/Makefile
modified: src/Tools/filter/.Source
modified: src/Tools/filter/mrc2bild/Config/OptionControlFile
modified: src/Tools/filter/mrc2bild/inc/mrc2bild.h
modified: src/Tools/filter/mrc2bild/src/argCheck.c
modified: src/Tools/filter/mrc2bild/src/init.c
modified: src/Tools/filter/mrc2bild/src/mrc2bild.c
modified: src/Tools/filter/mrc2bild/src/mrc2bild.html
modified: src/Tools/filter/mrc2bild/src/mrc2bild.pane
modified: src/Tools/filter/mrc2bild/src/test/Makefile
modified: src/Tools/filter/mrc2bild/src/usage.c
new file: src/Tools/filter/mrc2png/Config/Define.inc
new file: src/Tools/filter/mrc2png/Config/OptionControlFile
new file: src/Tools/filter/mrc2png/Config/Target.inc
new file: src/Tools/filter/mrc2png/Makefile
new file: src/Tools/filter/mrc2png/doc/Makefile
new file: src/Tools/filter/mrc2png/inc/config.h
new file: src/Tools/filter/mrc2png/inc/mrc2png.h
new file: src/Tools/filter/mrc2png/src/.Depend
new file: src/Tools/filter/mrc2png/src/.Source
new file: src/Tools/filter/mrc2png/src/Makefile
new file: src/Tools/filter/mrc2png/src/X86MAC64
new file: src/Tools/filter/mrc2png/src/argCheck.c
new file: src/Tools/filter/mrc2png/src/init.c
new file: src/Tools/filter/mrc2png/src/mrc2png.c
new file: src/Tools/filter/mrc2png/src/mrc2png.pane
new file: src/Tools/filter/mrc2png/src/usage.c
new file: src/Tools/filter/mrc2png/src/util.c
modified: src/Tools/mrcImage/mrcImageAreaCalc/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageAreaCalc/src/mrcImageAreaCalc.html
modified: src/Tools/mrcImage/mrcImageAreaCalc/src/mrcImageAreaCalc.pane
modified: src/Tools/mrcImage/mrcImageAreaCalc/src/usage.c
Takuo Yasunaga [Thu, 12 Nov 2015 22:32:51 +0000 (07:32 +0900)]
Bug fixed:
modified: Makefile
modified: src/Tools/Integration/Display2/src/wish/Display2.wish
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified: src/Tools/Integration/Display2/src/wish/LayerLineUtil.wish
modified: src/Tools/Integration/Display2/src/wish/tclIndex
中野沙紀 [Wed, 11 Nov 2015 11:11:38 +0000 (20:11 +0900)]
Merge branch 'master' of git://git.sourceforge.jp/gitroot/eos/base
中野沙紀 [Wed, 11 Nov 2015 11:06:43 +0000 (20:06 +0900)]
recompile
久永浩司 [Wed, 11 Nov 2015 10:37:52 +0000 (19:37 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
久永浩司 [Wed, 11 Nov 2015 09:54:56 +0000 (18:54 +0900)]
make eosBayesInit
Takuo Yasunaga [Tue, 10 Nov 2015 22:33:22 +0000 (07:33 +0900)]
Display2: update
modified: bin/wish/Display2/Display2Init.wish
modified: bin/wish/Display2/tclIndex
modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish
Takuo Yasunaga [Tue, 10 Nov 2015 22:15:01 +0000 (07:15 +0900)]
Display2 updated: for default
modified: bin/wish/Display2/Display2Init.wish
modified: src/Tools/Config/Define.inc
modified: src/Tools/Integration/Display2/Config/OptionControlFile
modified: src/Tools/Integration/Display2/inc/Display2.h
modified: src/Tools/Integration/Display2/src/Display2.c
Takuo Yasunaga [Tue, 10 Nov 2015 02:20:23 +0000 (11:20 +0900)]
modified: include/lmrcImageSymmetryFind.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageSymmetryFind.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageTransformDescartesIntoPolar.c
modified: src/Tools/Config/Define.inc
modified: src/Tools/mrcImage/mrcImageSymmetryAverage/src/mrcImageSymmetryAverage.c
modified: src/Tools/mrcImage/mrcImageSymmetryAverage/src/mrcImageSymmetryAverage.html
new file: src/Tools/mrcImage/mrcImageSymmetryAverage/src/test/Makefile
new file: src/Tools/mrcImage/mrcImageSymmetryAverage/src/test/data
modified: src/Tools/mrcImage/mrcImageSymmetryCentreFind/src/mrcImageSymmetryCentreFind.c
modified: src/Tools/mrcImage/mrcImageSymmetryCentreFind/src/mrcImageSymmetryCentreFind.html
new file: src/Tools/mrcImage/mrcImageSymmetryCentreFind/src/test/Makefile
new file: src/Tools/mrcImage/mrcImageSymmetryCentreFind/src/test/data
modified: src/Tools/mrcImage/mrcImageSymmetryFind/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageSymmetryFind/inc/mrcImageSymmetryFind.h
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/argCheck.c
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/init.c
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/mrcImageSymmetryFind.c
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/mrcImageSymmetryFind.html
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/mrcImageSymmetryFind.pane
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/test/Makefile
modified: src/Tools/mrcImage/mrcImageSymmetryFind/src/usage.c
Takuo Yasunaga [Thu, 5 Nov 2015 18:23:55 +0000 (03:23 +0900)]
For updating
modified: env/install-eos.sh
new file: env/update-eos.sh
Takuo Yasunaga [Thu, 5 Nov 2015 17:38:14 +0000 (02:38 +0900)]
install-env
modified: env/Eos_env
modified: env/install-eos.sh
mrcImageAreaCalc
modified: include/lmrcImageCalcArea.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageCalcArea.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageCalcArea.h
Takuo Yasunaga [Thu, 29 Oct 2015 10:43:57 +0000 (19:43 +0900)]
Rebuild:
Start to develop mrcFFTCentralSectionCompare
Takuo Yasunaga [Tue, 27 Oct 2015 21:27:08 +0000 (06:27 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Conflicts:
src/Objects/DataManip/mrcImage/doc/mrcImage.html
Takuo Yasunaga [Tue, 27 Oct 2015 21:24:40 +0000 (06:24 +0900)]
Rebuild:
Takuo Yasunaga [Tue, 27 Oct 2015 20:53:17 +0000 (05:53 +0900)]
New tool
new file: bin/mrcFFTCentralSection
under construction
new file: bin/mrcImageShapeRelaxation
new file: include/lmrcFFTCentralSection.h
modified: include/mrcImage.h
new file: include/mrcImageShape.h
new file: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c
new file: src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.h
Add FFTCenterChange
modified: src/Objects/DataManip/mrcImage/src/lmrcImageFFT.c
Add Linear for FFT
modified: src/Objects/DataManip/mrcImage/src/mrcImageGet.c
Takuo Yasunaga [Sun, 18 Oct 2015 13:26:40 +0000 (22:26 +0900)]
mrc2bild completed:
new file: bin/mrc2bild
modified: include/bildFile.h
modified: src/Objects/DataManip/bildFile/src/lmrc2bild.c
modified: src/Tools/filter/mrc2bild/Config/OptionControlFile
Takuo Yasunaga [Sun, 18 Oct 2015 11:53:38 +0000 (20:53 +0900)]
mrcImageShapeSearch: -OVBILD
new tool mrc2bild
new file: include/bildFile.h
new file: src/Objects/DataManip/bildFile/src/lmrc2bild.c
new file: src/Tools/filter/mrc2bild/
modified: src/Tools/mrcImage/mrcImageShapeSearch/Config/OptionControlFile
modified: src/Tools/mrcImage/mrcImageShapeSearch/src/mrcImageShapeSearch.c
Takuo Yasunaga [Sun, 11 Oct 2015 19:40:34 +0000 (04:40 +0900)]
ctfDisplay modifided: Default values set
modified: bin/wish/ctfDisplay/ctfDisplay.wish
modified: src/Tools/Integration/ctfDisplay/src/wish/ctfDisplay.wish
modified: src/Objects/DataExpress/TclTk/src/ctfInfo.wish
mrcImageClusterAnalysis modified: No average
modified: include/lmrcImageClusterAnalysis.h
modified: src/Objects/DataManip/mrcImage/src/lmrcImageClusterAnalysis.c
modified: src/Objects/DataManip/mrcImage/src/lmrcImageClusterAnalysis.h
modified: src/Tools/mrcImage/mrcImageClusterAnalysis/src/mrcImageClusterAnalysis.html
modified: src/Tools/mrcImage/mrcImageClusterAnalysis/src/test/Makefile
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