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eos/base.git
7 years agomodified eosBayesCondition v2.3.9p0190
久永浩司 [Thu, 29 Dec 2016 14:54:39 +0000 (23:54 +0900)]
modified eosBayesCondition

7 years agomodified ctfdeterminsationBybayes v2.3.9p0189
久永浩司 [Wed, 28 Dec 2016 17:18:05 +0000 (02:18 +0900)]
modified ctfdeterminsationBybayes

7 years agomodified ctfbayescheck.c v2.3.9p0188
久永浩司 [Mon, 19 Dec 2016 04:17:16 +0000 (13:17 +0900)]
modified ctfbayescheck.c

7 years agoMerge branch 'master' of git.osdn.net:/gitroot/eos/base v2.3.9p0187
久永浩司 [Thu, 15 Dec 2016 10:54:34 +0000 (19:54 +0900)]
Merge branch 'master' of git.osdn.net:/gitroot/eos/base

7 years agomodified ctfforbayes.c
久永浩司 [Thu, 15 Dec 2016 10:52:16 +0000 (19:52 +0900)]
modified ctfforbayes.c

7 years ago modified: src/Objects/DataManip/mrcImage/src/lmrcImageHoleFilling.c v2.3.45p0266 v2.3.45p0267
Takuo Yasunaga [Sat, 10 Dec 2016 08:18:42 +0000 (17:18 +0900)]
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageHoleFilling.c
modified:   src/Tools/mrcImage/mrcImageHoleFilling/src/mrcImageHoleFilling.c

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.45p0265
飛松亜美 [Fri, 9 Dec 2016 10:04:08 +0000 (19:04 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years agolmrc3Dto2DFFT: Bug fixed
飛松亜美 [Fri, 9 Dec 2016 09:38:35 +0000 (18:38 +0900)]
lmrc3Dto2DFFT: Bug fixed

7 years agomodified ctfforbayes v2.3.9p0186
Koji HISANAGA [Sun, 4 Dec 2016 07:57:11 +0000 (16:57 +0900)]
modified ctfforbayes

7 years agomodified ctfforbayes.c v2.3.9p0185 v2.3.9p185
Koji HISANAGA [Tue, 8 Nov 2016 12:39:11 +0000 (21:39 +0900)]
modified ctfforbayes.c

7 years agomodified ctfforbayes.c v2.3.9p0184
Koji HISANAGA [Mon, 7 Nov 2016 14:03:25 +0000 (14:03 +0000)]
modified ctfforbayes.c

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Koji HISANAGA [Sun, 6 Nov 2016 13:10:08 +0000 (22:10 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years agomodified ctfforbayes.c
Koji HISANAGA [Sun, 6 Nov 2016 13:09:06 +0000 (22:09 +0900)]
modified ctfforbayes.c

7 years agomodified ctfforbayes.c v2.3.9p0183
久永浩司 [Fri, 4 Nov 2016 12:27:55 +0000 (21:27 +0900)]
modified ctfforbayes.c

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Koji HISANAGA [Mon, 31 Oct 2016 06:38:05 +0000 (15:38 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years agocompiled hostdepend of X86LINUX64
Koji HISANAGA [Mon, 31 Oct 2016 06:35:40 +0000 (15:35 +0900)]
compiled hostdepend of X86LINUX64

7 years agomodfied ctfforbayescheck.c v2.3.9p0182
久永浩司 [Mon, 31 Oct 2016 05:51:23 +0000 (14:51 +0900)]
modfied ctfforbayescheck.c

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.9p0181
久永浩司 [Thu, 27 Oct 2016 13:07:02 +0000 (22:07 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years agomodified eosBayesWrite.c
久永浩司 [Thu, 27 Oct 2016 13:00:37 +0000 (22:00 +0900)]
modified eosBayesWrite.c

7 years ago deleted: "src/Tools/mrcImage/mrcImageCorrelation/src/]\177" v2.3.45p0264
Takuo Yasunaga [Wed, 19 Oct 2016 02:14:33 +0000 (11:14 +0900)]
deleted:    "src/Tools/mrcImage/mrcImageCorrelation/src/]\177"
modified:   src/Tools/mrcImage/mrcImageCorrelation/src/test/Makefile
modified:   src/Tools/rec3d/mrc3Dto2DFFT/src/mrc3Dto2DFFT.html

7 years agomrc2png : -z v2.3.45p0262
Takuo Yasunaga [Tue, 18 Oct 2016 05:43:22 +0000 (14:43 +0900)]
mrc2png : -z
modified:   src/Tools/filter/mrc2png/Config/OptionControlFile
modified:   src/Tools/filter/mrc2png/src/mrc2png.c

7 years agoBug fixed: In-Out v2.3.45p0261
Takuo Yasunaga [Tue, 18 Oct 2016 05:31:21 +0000 (14:31 +0900)]
Bug fixed: In-Out
modified:   src/Tools/filter/mrc2png/src/mrc2png.c

7 years agoAdd linfo.z: lmrc2png for 3D v2.3.45p0260
Takuo Yasunaga [Tue, 18 Oct 2016 05:25:44 +0000 (14:25 +0900)]
Add linfo.z: lmrc2png for 3D
modified:   include/pngFile.h
modified:   src/Objects/DataExpress/pngFile/inc/pngFile.h
modified:   src/Objects/DataExpress/pngFile/src/lmrc2png.c

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.44p0259
Takuo Yasunaga [Tue, 18 Oct 2016 05:16:19 +0000 (14:16 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years ago modified: include/lmrcImageRadialDistribution.h v2.3.44p0258
Takuo Yasunaga [Tue, 18 Oct 2016 05:13:01 +0000 (14:13 +0900)]
modified:   include/lmrcImageRadialDistribution.h
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageRadialDistribution.c
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageRadialDistribution.h

modified:   src/Tools/filter/mrc2png/src/mrc2png.c

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.9p0179 v2.3.9p0180 v2.3.9p179
久永浩司 [Fri, 7 Oct 2016 08:02:39 +0000 (17:02 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years agomake eosBayesParameterOfMaxPosterior.c:
久永浩司 [Fri, 7 Oct 2016 07:54:44 +0000 (16:54 +0900)]
make eosBayesParameterOfMaxPosterior.c:

7 years agobug fixed: v2.3.43p0257 v2.3.45p0263
Takuo Yasunaga [Sun, 2 Oct 2016 08:49:58 +0000 (17:49 +0900)]
bug fixed:
modified:   Makefile
New tool: mrc2png
modified:   include/pngFile.h

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
Takuo Yasunaga [Sun, 25 Sep 2016 22:39:15 +0000 (07:39 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years agoNew tool mrcImageHoleFilling v2.3.42p0253
Takuo Yasunaga [Sun, 25 Sep 2016 22:36:53 +0000 (07:36 +0900)]
New tool mrcImageHoleFilling
new file:   bin/mrcImageHoleFilling
new file:   include/lmrcImageHoleFilling.h
modified:   src/Objects/DataManip/mrcImage/src/.CHeader
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageConnectivityNumberCalc.c
new file:   src/Objects/DataManip/mrcImage/src/lmrcImageHoleFilling.c.org
modified:   src/Tools/Config/Define.inc
modified:   src/Tools/mrcImage/.Source
modified:   src/Tools/mrcImage/mrcImageDistanceConversion/src/test/Makefile

7 years ago modified: Makefile v2.3.42p0256
Eos [Tue, 6 Sep 2016 12:43:05 +0000 (21:43 +0900)]
modified:   Makefile

7 years agoMerge branch 'master' of git.osdn.jp:/gitroot/eos/base
Eos [Tue, 6 Sep 2016 12:42:43 +0000 (21:42 +0900)]
Merge branch 'master' of git.osdn.jp:/gitroot/eos/base

7 years agoRebuild:
Eos [Tue, 6 Sep 2016 12:32:33 +0000 (21:32 +0900)]
Rebuild:

7 years agoMerge branch 'master' of git.osdn.jp:/gitroot/eos/base
Takuo Yasunaga [Tue, 6 Sep 2016 07:04:50 +0000 (16:04 +0900)]
Merge branch 'master' of git.osdn.jp:/gitroot/eos/base

7 years agobug fixed: --unshallow v2.3.42p0255
Takuo Yasunaga [Tue, 6 Sep 2016 06:51:31 +0000 (15:51 +0900)]
bug fixed: --unshallow
modified:   Makefile

7 years agoRebuild: Display2 ctfDisplay v2.3.41p0254
Eos [Sun, 4 Sep 2016 12:49:35 +0000 (21:49 +0900)]
Rebuild: Display2 ctfDisplay

7 years ago modified: Makefile
Eos [Thu, 1 Sep 2016 21:32:11 +0000 (06:32 +0900)]
modified:   Makefile

7 years ago modified: src/Tools/filter/mrcImage2FFT/src/mrcImage2FFT.html v2.3.41p0253
Eos [Thu, 1 Sep 2016 11:58:58 +0000 (20:58 +0900)]
modified:   src/Tools/filter/mrcImage2FFT/src/mrcImage2FFT.html

7 years agorebuid
Eos [Wed, 3 Aug 2016 23:49:13 +0000 (08:49 +0900)]
rebuid

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.9p0178
久永浩司 [Sun, 10 Jul 2016 05:20:31 +0000 (14:20 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years agoedit source file of eosbayesclass
久永浩司 [Sun, 10 Jul 2016 05:12:04 +0000 (14:12 +0900)]
edit source file of eosbayesclass

7 years ago deleted: src/Tools/Integration/Display2/src/test.ps v2.3.41p0252
Takuo Yasunaga [Sat, 4 Jun 2016 22:17:30 +0000 (07:17 +0900)]
deleted:    src/Tools/Integration/Display2/src/test.ps

7 years agoDisplay2: FileSave Re-check
Takuo Yasunaga [Sat, 4 Jun 2016 22:16:40 +0000 (07:16 +0900)]
Display2: FileSave Re-check
modified:   Makefile
modified:   bin/wish/Display2/Display2Init.wish
modified:   bin/wish/Display2/Display2Menu.wish
modified:   include/ctffuncforbayes.h
modified:   include/mrcImageShape.h
modified:   src/Objects/DataExpress/TclTk/doc/TclTk.html
modified:   src/Objects/DataExpress/eosRuby/src/Swig/mkmf.log
modified:   src/Objects/DataExpress/eosRuby/src/Swig/molvieRuby_wrap.c
modified:   src/Objects/DataManip/mrcImageShape/doc/mrcImageShape.html
modified:   src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2Menu.wish

7 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.40p0250 v2.3.40p0251
Takuo Yasunaga [Sat, 4 Jun 2016 20:52:38 +0000 (05:52 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

7 years agoAdd TiltRect: v2.3.40p0249
Takuo Yasunaga [Sat, 4 Jun 2016 20:48:46 +0000 (05:48 +0900)]
Add TiltRect:
modified:   bin/wish/Display2/Display2.wish
modified:   bin/wish/Display2/Display2Desktop.wish
modified:   bin/wish/Display2/Display2InfoROI.wish
modified:   bin/wish/Display2/Display2Init.wish
modified:   bin/wish/Display2/Display2Menu.wish
modified:   bin/wish/Display2/Display2MenuROI.wish
modified:   bin/wish/Display2/RoiAreaCreate.wish
modified:   bin/wish/Display2/RoiAreaFile.wish
modified:   bin/wish/Display2/RoiAreaMove.wish
modified:   bin/wish/Display2/RoiAreaResize.wish
modified:   bin/wish/Display2/RoiAreaRotate.wish
modified:   bin/wish/Display2/RoiAreaSelect.wish
modified:   bin/wish/Display2/tclIndex
modified:   include/lmrcImageROI2D.h
modified:   lib/fileSave.wish
modified:   src/Objects/DataExpress/TclTk/src/fileSave.wish
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageROI2D.c
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageROI2D.h
modified:   src/Tools/Config/Define.inc
modified:   src/Tools/Integration/Display2/src/wish/Display2.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2Desktop.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2InfoROI.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2Menu.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2MenuROI.wish
modified:   src/Tools/Integration/Display2/src/wish/RoiAreaCreate.wish
modified:   src/Tools/Integration/Display2/src/wish/RoiAreaFile.wish
modified:   src/Tools/Integration/Display2/src/wish/RoiAreaMove.wish
modified:   src/Tools/Integration/Display2/src/wish/RoiAreaResize.wish
modified:   src/Tools/Integration/Display2/src/wish/RoiAreaRotate.wish
modified:   src/Tools/Integration/Display2/src/wish/RoiAreaSelect.wish
modified:   src/Tools/Integration/Display2/src/wish/tclIndex
modified:   src/Tools/mrcImage/mrcImageROI/Config/OptionControlFile
modified:   src/Tools/mrcImage/mrcImageROI/inc/mrcImageROI.h
modified:   src/Tools/mrcImage/mrcImageROI/src/argCheck.c
modified:   src/Tools/mrcImage/mrcImageROI/src/init.c
modified:   src/Tools/mrcImage/mrcImageROI/src/mrcImageROI.c
modified:   src/Tools/mrcImage/mrcImageROI/src/mrcImageROI.html
modified:   src/Tools/mrcImage/mrcImageROI/src/mrcImageROI.pane
modified:   src/Tools/mrcImage/mrcImageROI/src/usage.c
modified:   src/Tools/mrcImage/mrcImageROIs/Config/OptionControlFile
modified:   src/Tools/mrcImage/mrcImageROIs/inc/mrcImageROIs.h
modified:   src/Tools/mrcImage/mrcImageROIs/src/argCheck.c
modified:   src/Tools/mrcImage/mrcImageROIs/src/init.c
modified:   src/Tools/mrcImage/mrcImageROIs/src/mrcImageROIs.c
modified:   src/Tools/mrcImage/mrcImageROIs/src/mrcImageROIs.html
modified:   src/Tools/mrcImage/mrcImageROIs/src/mrcImageROIs.pane
modified:   src/Tools/mrcImage/mrcImageROIs/src/test/Makefile
modified:   src/Tools/mrcImage/mrcImageROIs/src/usage.c
Compliled:
modified:   src/Tools/rec3d/mrc2DFTto3DFT/src/mrc2DFTto3DFT.html

8 years agochange function of ctfDeterminationByBayes v2.3.9p0177
久永浩司 [Mon, 16 May 2016 06:47:47 +0000 (15:47 +0900)]
change function of ctfDeterminationByBayes

8 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.9p0176
久永浩司 [Sat, 7 May 2016 09:04:49 +0000 (18:04 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

8 years agomake new sourcefile
久永浩司 [Sat, 7 May 2016 07:47:35 +0000 (16:47 +0900)]
make new sourcefile

8 years agoDisplay2 update: hidden angleLock v2.3.39p0248
Takuo Yasunaga [Sat, 9 Apr 2016 10:21:00 +0000 (19:21 +0900)]
Display2 update: hidden angleLock
modified:   bin/wish/Display2/Display2InfoROI.wish
modified:   bin/wish/Display2/Display2MenuROI.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2InfoROI.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2MenuROI.wish

8 years agoDisplay2 update: for angleLock v2.3.39p0247
Takuo Yasunaga [Sat, 9 Apr 2016 10:13:20 +0000 (19:13 +0900)]
Display2 update: for angleLock
modified:   bin/wish/Display2/Display2InfoROI.wish
modified:   bin/wish/Display2/Display2Init.wish
modified:   bin/wish/Display2/Display2Menu.wish
modified:   bin/wish/Display2/Display2MenuROI.wish
modified:   bin/wish/Display2/RoiAreaCreate.wish
modified:   lib/fileSave.wish
modified:   src/Objects/DataExpress/TclTk/src/fileSave.wish
modified:   src/Objects/DataManip/mrcImage/src/mrcImageToIntImage.c
modified:   src/Tools/Integration/Display2/src/Display2.html
modified:   src/Tools/Integration/Display2/src/wish/Display2InfoROI.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2Menu.wish
modified:   src/Tools/Integration/Display2/src/wish/Display2MenuROI.wish
modified:   src/Tools/Integration/Display2/src/wish/RoiAreaCreate.wish
modified:   src/Tools/Integration/Display2/src/wish/tclIndex

8 years ago deleted: src/Objects/DataManip/dmFile/src/Image v2.3.38p0246
Takuo Yasunaga [Fri, 1 Apr 2016 09:17:03 +0000 (18:17 +0900)]
deleted:    src/Objects/DataManip/dmFile/src/Image

8 years ago modified: src/Objects/DataManip/dmFile/src/ldm2mrc.c
Takuo Yasunaga [Fri, 1 Apr 2016 09:15:36 +0000 (18:15 +0900)]
modified:   src/Objects/DataManip/dmFile/src/ldm2mrc.c

8 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.38p0245
Takuo Yasunaga [Mon, 28 Mar 2016 05:32:02 +0000 (14:32 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

8 years agoBug fixed:
Takuo Yasunaga [Mon, 28 Mar 2016 05:31:48 +0000 (14:31 +0900)]
Bug fixed:
modified:   bin/wish/ctfDisplay/tclIndex
modified:   src/Objects/DataManip/mrcImage/src/lmrcFFTInfo.c
modified:   src/Objects/DataManip/mrcImage/src/mrcImageGet.c

8 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
中野沙紀 [Thu, 24 Mar 2016 02:20:54 +0000 (11:20 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

8 years ago"push"
中野沙紀 [Tue, 22 Mar 2016 04:02:38 +0000 (13:02 +0900)]
"push"

8 years ago-Owall and -Oball were added: mrcImageMeanFreePathCalc v2.3.38p0244
Takuo Yasunaga [Sun, 20 Mar 2016 00:02:22 +0000 (09:02 +0900)]
-Owall and -Oball were added: mrcImageMeanFreePathCalc
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/Config/OptionControlFile
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.c

8 years agoBug fixed: CharImage did not be added. -> All Image and FT files can be added now. v2.3.38p0243
Takuo Yasunaga [Sat, 19 Mar 2016 05:27:47 +0000 (14:27 +0900)]
Bug fixed: CharImage did not be added. -> All Image and FT files can be added now.
modified:   src/Tools/mrcImage/mrcImageAdd/src/mrcImageAdd.c

8 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base
中野沙紀 [Fri, 18 Mar 2016 06:24:20 +0000 (15:24 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

8 years ago modified: Objects/DataManip/mrcImage/src/lmrcMultiFFTCentralSectionsCompare.c
中野沙紀 [Fri, 18 Mar 2016 06:07:45 +0000 (15:07 +0900)]
modified:   Objects/DataManip/mrcImage/src/lmrcMultiFFTCentralSectionsCompare.c
new file:   Tools/rec3d/mrc2DFTto3DFT/inc/mrc2DFTto3DFT.h
new file:   Tools/rec3d/mrc3Dto2DFFT/inc/mrc3Dto2DFFT.h
new file:   Tools/rec3d/mrc3Dto2DFFT/src/mrc3Dto2DFFT.c

8 years agoRebuild: v2.3.38p0242
Takuo Yasunaga [Thu, 17 Mar 2016 07:09:02 +0000 (16:09 +0900)]
Rebuild:
modified:   src/Objects/DataExpress/.Source.org
modified:   src/Objects/DataExpress/Contour/src/Makefile
modified:   src/Objects/DataExpress/avsFile/src/Makefile
modified:   src/Objects/DataExpress/eosAlsa/src/Makefile
modified:   src/Objects/DataExpress/eosOpenGL/src/Makefile
modified:   src/Objects/DataExpress/gifFile/src/Makefile
new file:   src/Objects/DataExpress/pngFile/.Source.org
modified:   src/Objects/DataExpress/pngFile/src/Makefile
modified:   src/Objects/DataExpress/psFile/src/Makefile

8 years agoSource Code refactoring
Takuo Yasunaga [Thu, 17 Mar 2016 07:06:09 +0000 (16:06 +0900)]
Source Code refactoring
new file:   include/lmrcImageMeanFreePath.h
modified:   src/Objects/DataManip/mrcImageShape/inc/mrcImageShape.h
new file:   src/Objects/DataManip/mrcImageShape/src/lmrcImageMeanFreePath.c
new file:   src/Objects/DataManip/mrcImageShape/src/lmrcImageMeanFreePath.h
modified:   src/Objects/DataManip/mrcImageShape/src/lmrcImageShapeSearch.c

-Length:
modified:   src/Tools/mrcImage/mrcImageInfo/src/mrcImageInfo.c
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.c

8 years agoAdd a fuction of default environments: Display2Init v2.3.37p0241
Takuo Yasunaga [Wed, 16 Mar 2016 03:11:29 +0000 (12:11 +0900)]
Add a fuction of default environments: Display2Init
modified:   bin/wish/Display2/Display2Init.wish

Source code fixed for OSX
modified:   src/Tools/mrcImage/mrcImageFourierPowerSpectrum/src/mrcImageFourierPowerSpectrum.c

New functions were added: any directions
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/inc/mrcImageMeanFreePathCalc.h
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/argCheck.c
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/init.c
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.c
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.html
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/mrcImageMeanFreePathCalc.pane
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/test/Makefile
modified:   src/Tools/mrcImage/mrcImageMeanFreePathCalc/src/usage.c

8 years agoNew Tool: v2.3.36p0240
Takuo Yasunaga [Sat, 27 Feb 2016 23:30:05 +0000 (08:30 +0900)]
New Tool:
new file:   bin/mrcImage2FFT
new file:   include/lmrcImageToFFT.h
modified:   src/Objects/DataManip/transform/src/.CHeader
new file:   src/Objects/DataManip/transform/src/lmrcImageToFFT.c
new file:   src/Objects/DataManip/transform/src/lmrcImageToFFT.h
modified:   src/Tools/Config/Define.inc

typechange: src/Tools/Makefile
modified:   src/Tools/filter/.Source
new file:   src/Tools/filter/mrcImage2FFT/

Modified:
modified:   env/Eos_env

8 years ago modified: mrc2DFTto3DFT.c
中野沙紀 [Sun, 21 Feb 2016 08:17:28 +0000 (17:17 +0900)]
modified:   mrc2DFTto3DFT.c

8 years ago new file: bin/.DS_Store v2.3.35p0239
Takuo Yasunaga [Sun, 21 Feb 2016 07:18:42 +0000 (16:18 +0900)]
new file:   bin/.DS_Store
new file:   bin/mrcMultiFFTCentralSectionsCompare
modified:   env/Eos_env
modified:   include/lmrc3Dto2D.h
modified:   include/lmrcFFTCentralSection.h
new file:   src/.DS_Store
new file:   src/Objects/.DS_Store
modified:   src/Objects/DataExpress/eosRuby/src/Swig/mkmf.log
new file:   src/Objects/DataManip/.DS_Store
new file:   src/Objects/DataManip/mrcImage/.DS_Store
new file:   src/Objects/DataManip/mrcImage/src/#lmrcMultiFFTCentralSectionsCompare.c#
new file:   src/Objects/DataManip/mrcImage/src/.DS_Store
new file:   src/Objects/DataManip/mrcImage/src/1
modified:   src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c
new file:   src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c~
modified:   src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.h
new file:   src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSectionCompare.c
new file:   src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSectionCompareInfoWrite.c
new file:   src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSectionsGet.c
new file:   src/Objects/DataManip/mrcImage/src/lmrcMultiFFTCentralSectionsCompare.c
modified:   src/Objects/DataManip/transform/src/lmrc3Dto2D.h
new file:   src/Objects/DataManip/transform/src/lmrc3Dto2DFFT.c
new file:   src/Tools/.DS_Store
modified:   src/Tools/.Source
modified:   src/Tools/Config/Define.inc
typechange: src/Tools/Makefile
new file:   src/Tools/mrcImage/.DS_Store
modified:   src/Tools/mrcImage/.Source
modified:   src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/mrcFFTCentralSectionCompare.c
new file:   src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Makefile
new file:   src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out.txt
new file:   src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out2.txt
new file:   src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out3.txt
new file:   src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out4.txt
new file:   src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/Out5.txt
new file:   src/Tools/mrcImage/mrcFFTCentralSectionCompare/src/test/data
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/.DS_Store
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/Config/Define.inc
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/Config/OptionControlFile
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/Config/Target.inc
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/Makefile
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/doc/Makefile
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/inc/config.h
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/inc/mrcMultiFFTCentralSectionsCompare.h
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/#mrcMultiFFTCentralSectionsCompare.c#
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/.DS_Store
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/.Depend
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/.Source
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/Makefile
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/X86MAC64
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/argCheck.c
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/init.c
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/mrcMultiFFTCentralSectionsCompare.c
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/mrcMultiFFTCentralSectionsCompare.html
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/mrcMultiFFTCentralSectionsCompare.pane
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/#Out1.txt#
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/#OutOutOut3.txt#
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/.DS_Store
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/Makefile
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/Out-21-5.txt
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/Out-22-5.txt
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/OutN-21-5.txt
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/OutN-22-5.txt
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/test/data
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/usage.c
new file:   src/Tools/mrcImage/mrcMultiFFTCentralSectionsCompare/src/util.c
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/.Depend
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/.Source
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/Makefile
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/X86MAC64
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/argCheck.c
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/init.c
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/mrc2DFTto3DFT.c
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/mrc2DFTto3DFT.html
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/mrc2DFTto3DFT.pane
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/test/Makefile
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/test/Outdata.3d
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/test/TestOutdata.3d
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/test/data
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/usage.c
new file:   src/Tools/rec3d/mrc2DFTto3DFT/src/util.c
typechange: util/src/CUDA/Makefile
typechange: util/src/Graphics/Makefile
new file:   util/src/ImageAnalysis/Makefile

8 years agoUnder contraction
Takuo Yasunaga [Sat, 20 Feb 2016 08:35:41 +0000 (17:35 +0900)]
Under contraction
modified:   src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c

-m 5/9 message
modified:   src/Objects/DataManip/mrcImage/src/lmrcImagePad.c

modified:   src/Tools/Config/Define.inc

-R: 2.5 -> 1.0
modified:   src/Tools/filter/tiff2mrc/Config/OptionControlFile
modified:   src/Tools/filter/tiff2mrc/src/init.c
modified:   src/Tools/filter/tiff2mrc/src/tiff2mrc.html
modified:   src/Tools/filter/tiff2mrc/src/tiff2mrc.pane
modified:   src/Tools/filter/tiff2mrc/src/usage.c

8 years ago"create Tool"
中野沙紀 [Sat, 20 Feb 2016 03:38:56 +0000 (12:38 +0900)]
"create Tool"

8 years agoMerge branch 'master' of git://git.sourceforge.jp/gitroot/eos/base
中野沙紀 [Sat, 20 Feb 2016 02:51:36 +0000 (11:51 +0900)]
Merge branch 'master' of git://git.sourceforge.jp/gitroot/eos/base

8 years ago"resolve conflict"
中野沙紀 [Sat, 13 Feb 2016 05:07:27 +0000 (14:07 +0900)]
"resolve conflict"

8 years ago"rebuld"
中野沙紀 [Sat, 13 Feb 2016 05:05:34 +0000 (14:05 +0900)]
"rebuld"

8 years ago modified: bin/wish/Display2/tclIndex v2.3.35p0238
Takuo Yasunaga [Sat, 13 Feb 2016 04:16:45 +0000 (13:16 +0900)]
modified:   bin/wish/Display2/tclIndex
modified:   include/lmrcImageConnectivityNumberCalc.h
modified:   include/lmrcImageFeatureCalc.h
modified:   lib/tclIndex
modified:   src/Objects/DataManip/mrcImage/src/lmrcFFTCentralSection.c

modified:   src/Objects/DataManip/mrcImage/src/lmrcImageConnectivityNumberCalc.c
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageConnectivityNumberCalc.h
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageDistanceConversion.c
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.c
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageFeatureCalc.h

modified:   src/Objects/DataManip/mrcImageShape/inc/mrcImageShape.h
modified:   src/Objects/DataManip/mrcImageShape/src/lmrcImageShapeSearch.c

new file:   src/Tools/mrcImage/mrcImageDistanceConversion/src/test/Makefile
new file:   src/Tools/mrcImage/mrcImageDistanceConversion/src/test/data

8 years ago"create new Tool mrc3Dto2DFFT"
中野沙紀 [Sat, 6 Feb 2016 13:28:26 +0000 (22:28 +0900)]
"create new Tool mrc3Dto2DFFT"

8 years ago"debug"
中野沙紀 [Fri, 29 Jan 2016 01:02:20 +0000 (10:02 +0900)]
"debug"

8 years ago"debug for lmrcMultiFFTCentralSectionsCompare.c"
中野沙紀 [Thu, 28 Jan 2016 07:36:59 +0000 (16:36 +0900)]
"debug for lmrcMultiFFTCentralSectionsCompare.c"

8 years ago"modified lmrcMultiFFTCentralSectionsCompare"
中野沙紀 [Fri, 22 Jan 2016 14:14:50 +0000 (23:14 +0900)]
"modified lmrcMultiFFTCentralSectionsCompare"

8 years ago"rebuid"
中野沙紀 [Fri, 22 Jan 2016 13:24:54 +0000 (22:24 +0900)]
"rebuid"

8 years ago"rebuid"
中野沙紀 [Fri, 22 Jan 2016 12:44:03 +0000 (21:44 +0900)]
"rebuid"

8 years ago"modified lmrcMultiFFTCentralSectionsCompare"
中野沙紀 [Fri, 22 Jan 2016 01:36:46 +0000 (10:36 +0900)]
"modified lmrcMultiFFTCentralSectionsCompare"

8 years ago"commit for modified Object"
中野沙紀 [Fri, 22 Jan 2016 01:24:50 +0000 (10:24 +0900)]
"commit for modified Object"

8 years ago"modified OptionControlFile"
中野沙紀 [Fri, 22 Jan 2016 00:37:29 +0000 (09:37 +0900)]
"modified OptionControlFile"

8 years ago"commit for add likelihood calc function"
中野沙紀 [Fri, 22 Jan 2016 00:31:34 +0000 (09:31 +0900)]
"commit for add likelihood calc function"

8 years agocommit for add function
中野沙紀 [Mon, 18 Jan 2016 11:01:04 +0000 (20:01 +0900)]
commit for add function

8 years agocommit for conflict
中野沙紀 [Fri, 15 Jan 2016 13:45:36 +0000 (22:45 +0900)]
commit for conflict

8 years agochange mrcMultiFFTCentralSectionsCompare.c
中野沙紀 [Fri, 15 Jan 2016 13:39:36 +0000 (22:39 +0900)]
change mrcMultiFFTCentralSectionsCompare.c

8 years agofirst commit
yonghong1969 [Fri, 15 Jan 2016 13:36:02 +0000 (22:36 +0900)]
first commit

8 years agocreate mrcMultiFFTCentralSectionsCompare
中野沙紀 [Thu, 14 Jan 2016 12:05:29 +0000 (21:05 +0900)]
create mrcMultiFFTCentralSectionsCompare

8 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.34p0235 v2.3.34p0236 v2.3.34p0237
Takuo Yasunaga [Tue, 12 Jan 2016 17:08:17 +0000 (18:08 +0100)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

8 years agoDisplay2:ROI
Takuo Yasunaga [Tue, 12 Jan 2016 17:06:40 +0000 (18:06 +0100)]
Display2:ROI
modified:   bin/wish/Display2/Display2Init.wish
modified:   bin/wish/Display2/RoiAreaFile.wish
Eos_env
modified:   env/Eos_env

lmrcImageDisptance: under construction
modified:   include/lmrcImageDistanceConversion.h

mrcImageShapePCA: 2D support Wcircle
modified:   include/lmrcImageShapePCA.h
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageDistanceConversion.c
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageDistanceConversion.h
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageDistanceConversion.h.org
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageShapePCA.c
modified:   src/Objects/DataManip/mrcImage/src/lmrcImageShapePCA.h
modified:   src/Objects/DataManip/mrcImageShape/src/lmrcImageShapeModePrint.c
modified:   src/Tools/Config/Define.inc
modified:   src/Tools/Integration/Display2/src/wish/Display2Init.wish
modified:   src/Tools/Integration/Display2/src/wish/RoiAreaFile.wish
modified:   src/Tools/mrcImage/mrcImageShapePCA/src/test/Makefile
modified:   src/Tools/mrcImage/mrcImageShapeSearch/Config/OptionControlFile
modified:   src/Tools/mrcImage/mrcImageShapeSearch/inc/mrcImageShapeSearch.h
modified:   src/Tools/mrcImage/mrcImageShapeSearch/src/argCheck.c
modified:   src/Tools/mrcImage/mrcImageShapeSearch/src/init.c
modified:   src/Tools/mrcImage/mrcImageShapeSearch/src/mrcImageShapeSearch.c
modified:   src/Tools/mrcImage/mrcImageShapeSearch/src/mrcImageShapeSearch.pane
modified:   src/Tools/mrcImage/mrcImageShapeSearch/src/usage.c

8 years agoMakefile modified: v2.3.33p0234
Eos [Mon, 30 Nov 2015 11:12:34 +0000 (20:12 +0900)]
Makefile modified:
modified:   Makefile
modified:   src/Config/Template/ObjectsTemplate.Dir/src/Makefile
modified:   src/Config/x86Linux64.inc

Display2
modified:   bin/wish/Display2/Display2Init.wish

for TclTkBLT
modified:   include/tkImgFmtMRC.h
modified:   lib/CommandEntry.wish
modified:   lib/ctfInfo.wish
new file:   lib/defaultLoad.wish
modified:   lib/tclUtil.wish
modified:   src/Config/x86Linux64.inc
modified:   src/Objects/DataExpress/TclTk/src/Makefile
modified:   src/Objects/DataExpress/TclTk/src/tkImgFmtMRC.c
modified:   src/Objects/DataExpress/TclTk/src/tkImgFmtMRC.h
modified:   src/Objects/DataExpress/eosRuby/src/Makefile
modified:   src/Objects/DataExpress/eosRuby/src/Swig/molvieRuby_wrap.c
deleted:    src/Tools/Integration/ctfDisplay/src/#%2Amerge%2A#164246YY#
modified:   util/src/TclTk/Makefile

8 years agoVerion up git:
Eos [Sun, 29 Nov 2015 22:34:38 +0000 (07:34 +0900)]
Verion up git:

Makefile version up

8 years ago modified: util/src/Admin/Makefile
Eos [Sun, 29 Nov 2015 22:33:33 +0000 (07:33 +0900)]
modified:   util/src/Admin/Makefile

GIT:

8 years agoFor CUDA v2.3.32p0233
Eos [Sun, 29 Nov 2015 22:10:35 +0000 (07:10 +0900)]
For CUDA
modified:   env/Eos_env

8 years agoFor LINUX: .bashrc and .bash_profile v2.3.31p0232
Eos [Sun, 29 Nov 2015 19:37:17 +0000 (04:37 +0900)]
For LINUX: .bashrc and .bash_profile
modified:   env/install-eos.sh
new file:   env/template.bashrc
modified:   env/update-eos.sh

8 years agoTcl/Tk Newversion v2.3.31p0231
Takuo Yasunaga [Sat, 28 Nov 2015 05:51:19 +0000 (14:51 +0900)]
Tcl/Tk Newversion
modified:   util/src/TclTk/Makefile

8 years agoMerge branch 'master' of git.sourceforge.jp:/gitroot/eos/base v2.3.31p0230
Takuo Yasunaga [Fri, 27 Nov 2015 01:21:29 +0000 (10:21 +0900)]
Merge branch 'master' of git.sourceforge.jp:/gitroot/eos/base

8 years agoBug fixed: makegeneral ln Makfile -> cp Makefile v2.3.30p0228
Takuo Yasunaga [Fri, 27 Nov 2015 01:20:33 +0000 (10:20 +0900)]
Bug fixed: makegeneral ln Makfile -> cp Makefile
modified:   sbin/makegeneral
typechange: src/Tools/Makefile

8 years agomrcImageCTFObservation : add -ctf v2.3.31p0224
Takuo Yasunaga [Fri, 27 Nov 2015 01:15:05 +0000 (10:15 +0900)]
mrcImageCTFObservation : add -ctf
modified:   src/Tools/mrcImage/mrcImageCTFObservation/Config/OptionControlFile
modified:   src/Tools/mrcImage/mrcImageCTFObservation/src/mrcImageCTFObservation.c

Under construction:mrcImage3DCTFObservation

8 years agoctfDisplay: modified v2.3.30p0226
Takuo Yasunaga [Sat, 21 Nov 2015 03:21:47 +0000 (12:21 +0900)]
ctfDisplay: modified
modified:   bin/wish/ctfDisplay/ctfDisplay.wish
modified:   src/Objects/DataExpress/TclTk/src/CommandEntry.wish
modified:   src/Tools/Integration/ctfDisplay/src/wish/ctfDisplay.wish

8 years ago modified: src/Tools/Integration/Display2/src/wish/Display2Init.wish v2.3.30p0225
Takuo Yasunaga [Sat, 21 Nov 2015 02:46:44 +0000 (11:46 +0900)]
modified:   src/Tools/Integration/Display2/src/wish/Display2Init.wish